ID EU487037; SV 2; circular; genomic DNA; STD; VRL; 2754 BP. XX AC EU487037; XX DT 11-MAR-2008 (Rel. 95, Created) DT 01-MAY-2011 (Rel. 108, Last updated, Version 3) XX DE Tomato leaf curl Philippines virus isolate P102, complete genome. XX KW . XX OS Tomato leaf curl Philippines virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2754 RA Tsai W.S., Shih S.L., Venkatesan S.G., Aquino M.U., Green S.K., Kenyon L., RA Jan F.J.; RT "Distribution and genetic diversity of begomoviruses infecting tomato and RT pepper plants in the Philippines"; RL Ann. Appl. Biol. 158(3):275-287(2011). XX RN [2] RP 1-2754 RA Tsai W.S., Shih S.L., Venkatesan S.G., Aquino M., Huang Y.C., Green S.K., RA Jan F.-J.; RT "Molecular identification of Solanaceae- and Cucurbitaceae-infecting RT Begomoviruses in the Philippines"; RL Unpublished. XX RN [3] RP 1-2754 RA Tsai W.S., Shih S.L., Venkatesan S.G., Aquino M., Huang Y.C., Green S.K., RA Jan F.-J.; RT ; RL Submitted (13-FEB-2008) to the INSDC. RL Virology Unit, AVRDC-the World Vegetable Center, P.O. Box 42, Shanhua, RL Taina, Taiwan 74199, Republic of China XX RN [4] RC Sequence update by submitter RP 1-2754 RA Tsai W.S., Shih S.L., Venkatesan S.G., Aquino M., Huang Y.C., Green S.K., RA Jan F.-J.; RT ; RL Submitted (16-AUG-2010) to the INSDC. RL Virology Unit, AVRDC-the World Vegetable Center, P.O. Box 42, Shanhua, RL Taina, Taiwan 74199, Republic of China XX DR MD5; d4895f07722a469a2991f586a66ead72. XX CC On Aug 16, 2010 this sequence version replaced gi:169640006. XX FH Key Location/Qualifiers FH FT source 1..2754 FT /organism="Tomato leaf curl Philippines virus" FT /segment="DNA-A" FT /host="tomato" FT /isolate="P102" FT /mol_type="genomic DNA" FT /country="Philippines:Laguna" FT /isolation_source="plant with yellow leaf curling symptom" FT /db_xref="taxon:96054" FT misc_feature join(2614..2754,1..142) FT /note="intergenic region" FT gene 143..487 FT /gene="V2" FT CDS 143..487 FT /codon_start=1 FT /gene="V2" FT /product="pre-coat protein" FT /db_xref="GOA:B0I510" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:B0I510" FT /protein_id="ACA61058.1" FT /translation="MWDPLVHPFPESLHGFRCMLAIKYLQSLQNKYSPDTVGHEFLKDF FT ICILRSKNYAEAFNRYSNVVANVYNTSEAQLRESVQSPCLCPHCPRHVLQAKVMDLQAH FT VSQAQDVQNV" FT gene 303..1079 FT /gene="V1" FT CDS 303..1079 FT /codon_start=1 FT /gene="V1" FT /product="coat protein" FT /db_xref="GOA:B0I511" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:B0I511" FT /protein_id="ACA61059.2" FT /translation="MPKRSIDTVTSLPMSITRRRLNYGSQYSLPASVPTVPDMSYKRRS FT WTYRPMFRKPKMYRMYRSRDVPRGCEGPCKVQSYEQRHDIAHVGKVICVSDVTRGNGLT FT HRVGKRFCVKSVYVLGKVWMDENIKTKNHTNTVMFFLVRDRRPYGTPQDFGQVFNMYDN FT EPSTATVKNDNRDRYQVLRKFQATVTGGQYASKEQAIVKRFMKINNHVTYNHQEAAKYD FT NHTENALLLYMACTHASNPVYATLKIRIYFYDSVQN" FT gene complement(1076..1477) FT /gene="C3" FT CDS complement(1076..1477) FT /codon_start=1 FT /gene="C3" FT /product="C3 protein" FT /db_xref="GOA:B1PRC2" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:B1PRC2" FT /protein_id="ACA61062.1" FT /translation="MDSRTGEPITAAQAENGVYTWTITNPLYFKISQHDKMPFLKNHDI FT ITVQIQFNHNLRKALGIHQCFLICKIWTHLHPQTWRFLRVFKYQCMKYLYSLGVISINN FT VIRAVDHVMYNVIQTIDVQISHIIKFNIY" FT gene complement(1218..1625) FT /gene="C2" FT CDS complement(1218..1625) FT /codon_start=1 FT /gene="C2" FT /product="C2 protein" FT /db_xref="GOA:B1PRC3" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:B1PRC3" FT /protein_id="ACA61061.1" FT /translation="MQNSSPSRGHSTQVPIKVQHKIAKKRPIRRRRIDLPCGCSYYLGL FT NCASYGFSHRGTHHCSSGREWRIYLDDNKSPLFQDIPTRQDAVLEKPRYHNSTNTVQPQ FT PEESVGNTSMFSDLQNLDSFTSSDLAFLKSI" FT gene complement(1525..2613) FT /gene="C1" FT CDS complement(1525..2613) FT /codon_start=1 FT /gene="C1" FT /product="replication-associated protein" FT /db_xref="GOA:B1PRD0" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B1PRD0" FT /protein_id="ACA61060.2" FT /translation="MAPPRKFQINAKNYFLTYPKCYLTKEETLAQIKTLDTVTNKKFIK FT ICRELHEDGSPHLHVLIQFEGKFRCTNKRFFDLVSPTRSAHYHPNIQGAKSSSDVKSYI FT DKDGDTLEWGEFQVDGRSARGGQQSANDAYAKAINTGSKSEALNVIRELAPKDFVLQFH FT NLNANLDRIFAPPLEVFRCRFLSASFDQVPKELEDWVSENVRDAAARPWRPISIVIEGD FT SRTGKTMWARSMGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEEKNSLLKDWALKNAKFITLTRPL FT YSGTHQSPAQNSQEETNTQAEN" FT gene complement(2166..2456) FT /gene="C4" FT CDS complement(2166..2456) FT /codon_start=1 FT /gene="C4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:B1PRC5" FT /protein_id="ACA61063.1" FT /translation="MGALISMCSSSSRGNSDARIRDSSTWYPQPGQHITIQTYRELNQA FT PTSNHILIRTETPSNGVSFRSMEDLLEGVNNRPMMLTPKQLTQEVSRRLLM" XX SQ Sequence 2754 BP; 728 A; 545 C; 594 G; 887 T; 0 other; accgtgggcc gcgcaaattt tttttatatt tgggcctaat gggcctttgg atgtcgttct 60 cgaccaatgg aaacgttccc tcatcgctta acaattatgt tgtcctctat ttatttctgc 120 tgcatcagtt ttgtactaaa aaatgtggga tcctctggta catccctttc ctgagagctt 180 acacggcttc agatgtatgc ttgccatcaa atatcttcag agcttacaga ataaatattc 240 tccggacact gttgggcatg agtttttgaa agattttata tgcatattgc gaagtaagaa 300 ttatgccgaa gcgttcaata gatacagtaa cgtcgttgcc aatgtctata acacgtcgga 360 ggctcaatta cgggagtcag tacagtctcc ctgcctctgt ccccactgtc ccagacatgt 420 cttacaagcg aaggtcatgg acttacaggc ccatgtttcg caagcccaag atgtacagaa 480 tgtatagaag ccgtgatgtt cctcgcgggt gtgaaggccc atgtaaggtt cagtcttatg 540 aacagcgtca tgatatagcc catgtgggta aggtcatatg tgtgtctgat gttactcgtg 600 gtaatgggct cacacatcgt gttggaaaga ggttttgtgt aaagtctgtg tatgtgttgg 660 ggaaggtctg gatggatgag aacatcaaga ctaagaatca cactaacact gtcatgtttt 720 ttttagttcg tgataggaga ccctatggga ctccccagga ttttggtcag gtttttaaca 780 tgtatgataa tgagcctagt actgcaactg ttaaaaatga taatagagat cgatatcaag 840 ttcttcgtaa atttcaagct accgtgactg gaggtcagta tgcaagcaag gagcaagcaa 900 tagtcaagag gttcatgaag attaacaacc atgttactta caatcatcaa gaggctgcga 960 agtatgataa ccatacagag aacgctttac tgttgtatat ggcttgtact catgctagta 1020 atccagtgta tgctacgttg aaaatcagaa tctattttta tgattctgtt cagaattaat 1080 aaatattgaa ttttattata tgcgaaattt gtacatctat tgtttgaatt acattgtaca 1140 tcacatgatc gactgcccta attacattgt ttatgctaat aacccctaaa ctatacaaat 1200 acttcataca ctgatattta aatactctta agaaacgcca agtctgagga tgtaaatgag 1260 tccagatttt gcagatcaga aaacattgat gtattcccaa cgctttcctc aggttgtggt 1320 tgaactgtat ttgtactgtt atgatatcgt ggtttttcaa gaacggcatc ttgtcgtgtt 1380 gggatatctt gaaataaagg ggatttgtta tcgtccaggt atatacgcca ttctctgcct 1440 gagctgcagt gatgggttcc cctgtgcgag aatccatacg aagcgcaatt aagtcctaga 1500 taataagagc agccgcaagg aagatcaatt ctccgcctgc gtattggtct cttcttggct 1560 attttgtgct ggactttgat gggtacctga gtagagtggc ctcgtgaggg tgatgaattt 1620 tgcatttttt agtgcccagt ctttgagtag agaatttttt tcctcatcca agtactcttt 1680 atacgacgac gtaggtcctg gattgcagag gaagattgtt gggatcccac ctttaatttg 1740 aattggtttc ccgtactttg tgttgctttg ccagtccctt tgggccccca taaactcttt 1800 aaaatgcttt agatagtggg ggtcgacgtc atcaatgacg ttataccagg catcattact 1860 gtacaccttt ggactaaggt ccagatgtcc acacaaataa ttatgtggac ccattgatct 1920 agcccacatc gtcttccctg tcctactatc tccttctatg acaatactta tgggtctcca 1980 tggccgcgca gcggcatccc taacattctc ggaaacccag tcttcaagtt cttttggaac 2040 ttggtcgaaa gaagcagaaa gaaaacgaca acgaaaaacc tctaaaggag gtgcaaagat 2100 cctatctaaa ttggcattta aattatgaaa ttgtaaaaca aaatcttttg gagctaactc 2160 cctaattaca ttaagagcct ccgacttact tcctgtgtta attgctttgg cgtaagcatc 2220 attggccgat tgttgacccc ctctagcaga tcttccatcg acctgaaact caccccattc 2280 gagggtgtct ccgtccttat caatatatga tttgacgtcg gagcttgatt tagctccctg 2340 tatgtttgga tggtaatgtg ctgacctggt tggggatacc aggtcgaaga atctcttatt 2400 cgtgcatctg aatttcccct cgaactggat gagcacatgg agatgagggc tcccatcttc 2460 gtgcagttct ctgcagattt tgatgaattt tttgtttgtt acagtatcta gtgtttttat 2520 ctgggcaagg gtttcctctt ttgtaagata gcatttggga tatgtaagaa aataattttt 2580 ggcatttatt tggaattttc tgggtggtgc catttgactt agtcaatggg tacctattga 2640 gaggatttca ttctactcag ggtatcggta cactggtacc catatatact tggttaccta 2700 atggcataat tgtaattttt tatgggcttc caagcggccc acgactataa tatt 2754 //