ID EU487027; SV 2; circular; genomic DNA; STD; VRL; 2752 BP. XX AC EU487027; XX DT 11-MAR-2008 (Rel. 95, Created) DT 01-MAY-2011 (Rel. 108, Last updated, Version 3) XX DE Tomato leaf curl Philippines virus isolate P7, complete genome. XX KW . XX OS Tomato leaf curl Philippines virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2752 RA Tsai W.S., Shih S.L., Venkatesan S.G., Aquino M.U., Green S.K., Kenyon L., RA Jan F.J.; RT "Distribution and genetic diversity of begomoviruses infecting tomato and RT pepper plants in the Philippines"; RL Ann. Appl. Biol. 158(3):275-287(2011). XX RN [2] RP 1-2752 RA Tsai W.S., Shih S.L., Venkatesan S.G., Aquino M., Huang Y.C., Green S.K., RA Jan F.-J.; RT "Molecular identification of Solanaceae- and Cucurbitaceae-infecting RT Begomoviruses in the Philippines"; RL Unpublished. XX RN [3] RP 1-2752 RA Tsai W.S., Shih S.L., Venkatesan S.G., Aquino M., Huang Y.C., Green S.K., RA Jan F.-J.; RT ; RL Submitted (13-FEB-2008) to the INSDC. RL Virology Unit, AVRDC-the World Vegetable Center, P.O. Box 42, Shanhua, RL Taina, Taiwan 74199, Republic of China XX RN [4] RC Sequence update by submitter RP 1-2752 RA Tsai W.S., Shih S.L., Venkatesan S.G., Aquino M., Huang Y.C., Green S.K., RA Jan F.-J.; RT ; RL Submitted (16-AUG-2010) to the INSDC. RL Virology Unit, AVRDC-the World Vegetable Center, P.O. Box 42, Shanhua, RL Taina, Taiwan 74199, Republic of China XX DR MD5; badbf84cad103050443a217fb058be8f. XX CC On Aug 16, 2010 this sequence version replaced gi:169639936. XX FH Key Location/Qualifiers FH FT source 1..2752 FT /organism="Tomato leaf curl Philippines virus" FT /segment="DNA-A" FT /host="tomato" FT /isolate="P7" FT /mol_type="genomic DNA" FT /country="Philippines:Nueva Ecija" FT /isolation_source="plant with yellow leaf curling symptom" FT /db_xref="taxon:96054" FT misc_feature join(2611..2752,1..139) FT /note="intergenic region" FT gene 140..484 FT /gene="V2" FT CDS 140..484 FT /codon_start=1 FT /gene="V2" FT /product="pre-coat protein" FT /db_xref="GOA:B0I510" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:B0I510" FT /protein_id="ACA60998.2" FT /translation="MWDPLVHPFPESLHGFRCMLAIKYLQSLQNKYSPDTVGHEFLKDF FT ICILRSKNYAEAFNRYSNVVANVYNTSEAQLRESVQSPCLCPHCPRHVLQAKVMDLQAH FT VSQAQDVQNV" FT gene 300..1076 FT /gene="V1" FT CDS 300..1076 FT /codon_start=1 FT /gene="V1" FT /product="coat protein" FT /db_xref="GOA:B0I511" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:B0I511" FT /protein_id="ACA60999.2" FT /translation="MPKRSIDTVTSLPMSITRRRLNYGSQYSLPASVPTVPDMSYKRRS FT WTYRPMFRKPKMYRMYRSRDVPRGCEGPCKVQSYEQRHDIAHVGKVICVSDVTRGNGLT FT HRVGKRFCVKSVYVLGKVWMDENIKTKNHTNTVMFFLVRDRRPYGTPQDFGQVFNMYDN FT EPSTATVKNDNRDRYQVLRKFQATVTGGQYASKEQAIVKRFMKINNHVTYNHQEAAKYD FT NHTENALLLYMACTHASNPVYATLKIRIYFYDSVQN" FT gene complement(1073..1474) FT /gene="C3" FT CDS complement(1073..1474) FT /codon_start=1 FT /gene="C3" FT /product="C3 protein" FT /db_xref="GOA:B1PR68" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:B1PR68" FT /protein_id="ACA61002.1" FT /translation="MDSRTGEPITAAQAENGVYTWTITNPLYFRISQHDKMPFLKNHDI FT ITLQIQFNHNLRKALGIHQCFLICKIWTHLHPQTWRFLRVFKYQCMKYLYSLGVISINN FT VIRAIRHVLYDVIQTIDVQISHIIKFNIY" FT gene complement(1215..1622) FT /gene="C2" FT CDS complement(1215..1622) FT /codon_start=1 FT /gene="C2" FT /product="C2 protein" FT /db_xref="GOA:B1PR69" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:B1PR69" FT /protein_id="ACA61001.1" FT /translation="MQNSSPSHNHCTQVPIKVQHKIAKRKPIRRRRIDLPCGCSYYLGI FT NCASYGFSHRGTHHCSSGREWRIYLDDNKSPLFQDIPTRQDAVLEKPRHHNTTDTVQPQ FT PEESVGNSSMFSDLQNLDSFTSSDLAFLKSI" FT gene complement(1522..2610) FT /gene="C1" FT CDS complement(1522..2610) FT /codon_start=1 FT /gene="C1" FT /product="replication-associated protein" FT /db_xref="GOA:B1PR70" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B1PR70" FT /protein_id="ACA61000.2" FT /translation="MAPPRKFQINAKNYFLTYPKCSLTKEETLAQIKRLDTVTNKKFIK FT ICRELHEDGSPHLHVLIQFEGKYRCTNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYI FT DKDGDTVEWGEFQVDGRSARGGQQSANDAYAKAINTGSKSEALNVIRELAPKDFVLQFH FT NLSANLDRIFAPPLEVFVSPFTSSSFNQVPKELEEWVSENVRDAAARPWRPKSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDSWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEDKNSPLKDWALKNAEFITIAQPL FT YSSTHQSPTQNSQAETNTETEN" FT gene complement(2163..2453) FT /gene="C4" FT CDS complement(2163..2453) FT /codon_start=1 FT /gene="C4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:B1PR71" FT /protein_id="ACA61003.1" FT /translation="MGALISMCSSSSRGNTDARITDSSTWCPQPGQHISIQTFRELNQA FT LTSNHILIRTETPSNGVSFRSMEDLLEGVNNRPMTLTPKQLTQEVSRRLLM" XX SQ Sequence 2752 BP; 733 A; 545 C; 591 G; 883 T; 0 other; accgtgggcc gcgcaaattt ttttatttgg gcctaatggg cctgttggat gtcggcctcg 60 accaatggaa accctccctc atcgcttaac aatcatgttg tcctctattt atttctgctg 120 catcagtttt gtactaagaa tgtgggatcc tctggtacat ccatttcctg aaagcttgca 180 cggcttcaga tgtatgcttg ccatcaaata tcttcagagc ttacagaata aatattctcc 240 agacactgtt gggcatgagt ttttgaaaga ttttatatgc atattgcgaa gtaagaatta 300 tgccgaagcg ttcaatagat acagtaacgt cgttgccaat gtctataaca cgtcggaggc 360 tcaattacgg gagtcagtac agtctccctg cctctgtccc cactgtccca gacatgtctt 420 acaagcgaag gtcatggact tacaggccca tgtttcgcaa gcccaagatg tacagaatgt 480 atagaagccg tgatgttcct cgtgggtgtg aaggcccatg taaggttcag tcttatgaac 540 agcgtcatga tatagcccat gtgggtaagg tcatatgtgt gtctgatgtc actcgtggta 600 atggtctcac acatcgtgtg ggaaagaggt tttgtgtaaa gtctgtgtat gtgttgggta 660 aggtctggat ggatgagaac atcaagacta agaatcacac taacactgtc atgttttttt 720 tagttcgtga taggagaccc tatgggactc cccaggattt tggtcaggtt tttaacatgt 780 atgataatga acctagtact gcaactgtta aaaatgataa tagagatcga tatcaagttc 840 ttcgtaaatt tcaagctacc gtgactggag gtcagtatgc aagcaaggag caagcaatag 900 tcaagaggtt catgaagatt aacaaccatg tcacttacaa tcatcaagag gctgcgaagt 960 atgataacca tacagagaac gctttactgt tgtatatggc atgtacccat gctagtaatc 1020 cagtgtatgc tactttgaaa atcagaatct atttttatga ttctgttcag aattaataaa 1080 tattaaattt tattatatga gaaatttgta catcgatagt ttgaattaca tcgtacagta 1140 catgtctgat agctctaatt acattgttta tgctaataac tcctaaacta tacaaatact 1200 tcatacactg atatttaaat actcttaaga aacgccaagt ctgaggatgt aaatgagtcc 1260 agattttgca gatcagaaaa cattgatgaa ttcccaacgc tttcctcagg ttgtggttga 1320 actgtatctg tagtgttatg atgtcgtggt ttttcaagaa cggcatcttg tcgtgttggg 1380 atatcctgaa ataaagggga tttgttatcg tccaggtata tacgccattc tctgcctgag 1440 ctgcagtgat gggttcccct gtgcgagaat ccatatgaag cgcaattaat tcctaagtag 1500 taagagcagc cgcaaggaag atcaattctc cgtctccgta ttggtttccg cttggctatt 1560 ttgtgttgga ctttgatggg tacttgagta caatggttgt gcgatggtga tgaattctgc 1620 attctttaat gcccagtctt tgagtggaga attcttatct tcatccaagt actctttata 1680 cgacgacgta ggccctggat tgcagaggaa gattgttggg ataccacctt taatttgaat 1740 tggtttcccg tacttcgtgt tgctttgcca gtctctttgg gcccccataa actctttaaa 1800 atgctttagg tagtgggggt ctacgtcatc aatgacgttg taccacgaat cattactgta 1860 gacctttgga ctcaggtcca gatgtccaca taaataatta tgtggtccca gtgatctagc 1920 ccacatcgtc ttccccgttc gactatcgcc ctctattaca atacttttag gtctccaagg 1980 ccgcgcagcg gcatccctta cattctcgga cacccattct tcaagttctt ttggaacttg 2040 attgaaagat gaagaagtaa aaggactaac aaaaacctct aaaggaggtg caaaaatcct 2100 atctaaattt gcacttaaat tatgaaactg taaaacaaaa tcttttggtg ctaattccct 2160 aattacatta agagcctccg acttacttcc tgtgttaatt gctttggcgt aagcgtcatt 2220 ggccgattgt tgaccccctc tagcagatct tccatcgacc tgaaactcac cccattcgac 2280 ggtgtctccg tccttatcaa tatatgattt gacgtcagag cttgatttag ctccctgaat 2340 gtttggatgg aaatgtgctg acctggttgg ggacaccagg tcgaagaatc tgttattcgt 2400 gcatctgtat ttcccctcga actggatgag cacatggaga tgagggctcc catcttcgtg 2460 cagttctctg cagattttga tgaatttctt gtttgttaca gtatctagtc tttttatttg 2520 ggcaagggtt tcctctttag taagagagca tttgggatat gtaagaaaat aatttttggc 2580 atttatttgg aattttctgg gtggtgccat ttgacttagt caatgggtac caattgagag 2640 gatttcattc tactcagggt atcggtacat tggtacccat atatacttgg ttacctaatg 2700 gcataattgt aattttttta tgggcttcca agcggcccac gactataata tt 2752 //