ID EU419645; SV 1; linear; genomic RNA; STD; VRL; 2950 BP. XX AC EU419645; XX DT 19-FEB-2008 (Rel. 94, Created) DT 07-SEP-2010 (Rel. 106, Last updated, Version 2) XX DE Black raspberry necrosis virus isolate GSMNP replication-associated DE polyprotein gene, partial cds. XX KW . XX OS Black raspberry necrosis virus OC Viruses; Riboviria; Picornavirales; Secoviridae. XX RN [1] RP 1-2950 RX DOI; 10.1094/PDIS-92-8-1254A. RX AGRICOLA; IND44097655. RA Sabanadzovic S., Abou Ghanem-Sabanadzovic N.; RT "First Report of Black raspberry necrosis virus in Rubus canadensis in RT Tennessee"; RL Plant Dis. 92(8):1254-1254(2008). XX RN [2] RP 1-2950 RA Sabanadzovic S., Abou Ghanem-Sabanadzovic N.; RT ; RL Submitted (22-JAN-2008) to the INSDC. RL Entomology and Plant Pathology, Mississippi State University, 100 Twelve RL Lane, Mississippi State, MS 39762, USA XX DR MD5; 38c950950bb91792788a43729c924f19. XX FH Key Location/Qualifiers FH FT source 1..2950 FT /organism="Black raspberry necrosis virus" FT /segment="RNA1" FT /isolate="GSMNP" FT /mol_type="genomic RNA" FT /country="USA" FT /db_xref="taxon:367301" FT CDS <1..>2950 FT /codon_start=1 FT /product="replication-associated polyprotein" FT /db_xref="GOA:B1A455" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:B1A455" FT /protein_id="ABZ90974.1" FT /translation="DSRCRCGELCLYVAERSAEHFDKESKSLKFMRKAQGLHEQEEFVQ FT EGPLDEYSCGLIYNLKDISELSMPHFHESDDTHQVHGCTDHKVFCCNLYGDKCAVEHSA FT AEIGYVKMIQDDVHPHTYTTNLAISLAQSERSLWDIKGFRKMVKHIKGYGIDDVPDPVD FT EQTRRFVRQAWRDFSDRDRYLMYRYFKINDTLKQKAVAKVADIKEEIKSWSIAGCWNAM FT PMGVKWMIGVIALFSFGCVLVDFLHTLMSMRSWSPVDILGNVLGATGAFGVLAFSSEGG FT SYAGSGVNIEATKYRDKRIKPYSQGGDSAGANFTYNELESIEAIKRGQYLLSYSNTGGQ FT SGVAAIFMYKDHSFLISTHEADWINYNKTCYMVGRDGTSREVSLAASGVKKVTRDGLVE FT PVCSIDILPTISVGKASSQSVWYDFHKTNEGRKVGVIVPNTRKDMAQECTKVHFRRNKE FT KTDCYNFPGSKGGWSAHDLLHAKAPHGNGMCGRLLLATGPAGNLMVVGVHVSGGGLNER FT ATSIFGGIDGSYKDNEDGKFYQQGELSICMKELIEPEFVTEMVDKIGRVEPSQQFRPSQ FT GTSIIKSEIHDDLWRRAETCPTVLTRSDPRPEVPFDPYQSGIRKFEKEVGPLDFQDEFS FT TENTVLTDIAEELLSKKREVGGFELDTVLDTHAAINGVEGIEYAEPLVMGTSEGYPYVL FT ERQPGDVGKFRYFSKNLYHWELNEEPRKELEALEESVSREDFDGKIITIACAKDEKTKL FT VKVYEKPKTRIFEILPYHYNILVRKYYLFFMQFIMRMHNVLPCKVGLNPFSQDWDEMHA FT EHSKFEHHFNGDYSGFDTGTPRQLSLKFSDLISDLAADGRRNKVIRRNLMQLAVDRRIL FT VLSELYHVRGGTPSGFALTVIINSMVNQFYLMWAWRKIMARISPSMVTYRIMRSHCTFS FT VYGDDNVVSFSLAVRDMYNLCTIADELKTIGVTLSDGKKTGVLIKWSELILAA" XX SQ Sequence 2950 BP; 817 A; 599 C; 794 G; 740 T; 0 other; gactcgaggt gtagatgtgg tgaattatgc ctgtatgttg ctgaaagatc tgcagagcat 60 tttgataagg aaagcaagtc acttaagttc atgcgaaagg cacaaggatt gcatgaacag 120 gaggagtttg tccaggaggg accactggac gagtacagtt gtggtttgat ctacaacttg 180 aaggatatat cggagctatc catgccgcat tttcacgagt ccgatgacac acatcaggtc 240 catggctgca ctgaccataa ggtgttctgc tgtaatctct atggggacaa gtgtgccgtg 300 gagcactcag cggctgagat aggttacgtc aagatgattc aagatgatgt gcatccacat 360 acctatacca ccaaccttgc gatcagtctg gcccagagtg agaggagtct ttgggacatt 420 aagggtttta ggaagatggt gaaacacata aaggggtatg gcattgatga cgtccccgat 480 ccggtcgatg agcaaactcg tcgttttgtg cgccaagcct ggcgagattt ttctgatcgg 540 gacaggtacc tcatgtacag atacttcaag atcaatgaca cactgaagca gaaggcagtt 600 gctaaagttg ctgacatcaa agaggagatc aagtcctgga gtattgctgg ctgttggaac 660 gcgatgccga tgggcgttaa gtggatgatc ggggtgattg ccctattttc ctttggatgt 720 gttctggtgg actttctaca cacactcatg tcgatgagat catggagccc ggttgacatt 780 cttggcaacg tccttggtgc aacaggagca tttggggtgc tagctttctc ctctgagggg 840 ggatcatatg ctggatctgg tgttaacatt gaagccacca agtacaggga taaacggatc 900 aagccgtatt cacaaggggg cgacagtgca ggggccaatt tcacatacaa tgaactggaa 960 tccattgagg ccatcaagag agggcaatac ttgttatcct acagcaacac tgggggacag 1020 agtggtgttg ccgcaatttt catgtacaag gatcactcct ttcttatctc cacgcatgaa 1080 gcggactgga tcaactacaa caaaacttgc tacatggttg gcagagatgg aacttctcgc 1140 gaagtcagtt tggcagcatc tggagtgaag aaggtgacaa gagatgggct agtggagcca 1200 gtttgttcga ttgatatcct accaaccatc tcagttggga aagcaagctc acaatccgtg 1260 tggtatgatt tccataaaac caatgagggc aggaaagtcg gagtgatagt acccaacacc 1320 cggaaggaca tggctcaaga gtgcacaaaa gttcacttca gacggaataa ggagaagaca 1380 gattgttaca attttcctgg gagcaagggg ggttggtccg ctcatgacct tttacatgcc 1440 aaggctcctc atgggaacgg aatgtgtggt aggctactat tagctacagg accagctggt 1500 aatctgatgg tggttggcgt ccatgttagt ggaggaggat tgaatgagag agcaaccagt 1560 atctttggtg gcattgatgg gtcctacaag gacaatgaag atgggaagtt ttatcagcaa 1620 ggtgaactga gcatatgtat gaaggagctg atagagccag agtttgtcac cgagatggtt 1680 gacaaaattg gacgtgttga gccatcacag cagttcaggc cctcacaagg aacatccata 1740 ataaagagtg agatccatga tgatttgtgg agaagagctg aaacttgtcc cactgtactc 1800 acgagatctg atcctagacc agaagtgcca tttgaccctt accagtcagg cattcggaaa 1860 tttgagaaag aagtgggacc gctggacttt caagatgaat tctccacaga aaatactgtg 1920 cttactgata ttgccgagga actcctgagt aagaagagag aggtgggggg ctttgagctt 1980 gacaccgttc ttgatacaca tgctgccatc aatggggtcg agggaattga gtatgccgaa 2040 ccacttgtta tgggcacatc cgaagggtac ccatatgtac tggaaaggca acctggtgat 2100 gttgggaagt ttcgctattt cagcaagaat ctataccact gggagctcaa cgaggaacca 2160 aggaaagagt tggaagcact ggaggagtca gtatcaaggg aggacttcga cgggaagatt 2220 atcaccattg cctgtgcaaa ggatgagaaa accaaacttg tcaaggtgta tgagaagccc 2280 aagaccagga tttttgagat cttaccttac cattataaca tcctcgttcg gaagtattat 2340 ctcttcttta tgcaattcat catgaggatg cataatgttc tgccgtgcaa ggtgggcctc 2400 aatcctttct ctcaagattg ggacgaaatg catgcagagc actcgaagtt cgagcaccat 2460 tttaatggtg attactcagg ttttgacaca ggcacaccca ggcagctctc gctcaagttc 2520 tcggatctaa tatctgattt ggctgctgac ggtcggagga acaaggtcat aagacggaat 2580 ctcatgcagc tggctgttga taggcgcata ttggttctct cagaattata ccacgtgagg 2640 ggcggcacac cgtcaggatt cgccctgact gtcatcatca attccatggt caaccaattc 2700 tatctgatgt gggcgtggag gaaaataatg gcaaggatta gtcccagcat ggtcacttac 2760 aggatcatga gatctcactg caccttctct gtctatggcg atgataatgt tgtctccttc 2820 agcttggctg ttagggacat gtacaatctt tgcaccatag cagacgaact gaaaacaatt 2880 ggtgtcacac tttctgatgg gaaaaagaca ggagtcctta tcaaatggtc agaattaatt 2940 ctggcagctt 2950 //