ID EU419580; SV 1; linear; genomic RNA; STD; VRL; 2073 BP. XX AC EU419580; XX DT 13-FEB-2008 (Rel. 94, Created) DT 13-MAY-2009 (Rel. 100, Last updated, Version 2) XX DE Soybean dwarf virus isolate Wisc6 minor coat protein, major capsid protein, DE and putative movement protein genes, complete cds. XX KW . XX OS Soybean dwarf virus OC Viruses; Riboviria; Luteoviridae; Luteovirus. XX RN [1] RP 1-2073 RX DOI; 10.1007/s00705-009-0370-4. RX PUBMED; 19360376. RA Thekke Veetil T., Hobbs H.A., Domier L.L.; RT "Sequence diversity of readthrough proteins of Soybean dwarf virus isolates RT from the Midwestern United States"; RL Arch. Virol. 154(5):861-866(2009). XX RN [2] RP 1-2073 RA Thekke Veetil T., Hobbs H.A., Domier L.L.; RT ; RL Submitted (22-JAN-2008) to the INSDC. RL Dept. Crop Sci., University of Illinois, USDA-ARS, 1102 S. Goodwin Ave., RL Urbana, IL 61801, USA XX DR MD5; 755d64a8fb4b3541cb67b38d327ef06b. XX FH Key Location/Qualifiers FH FT source 1..2073 FT /organism="Soybean dwarf virus" FT /isolate="Wisc6" FT /mol_type="genomic RNA" FT /country="USA" FT /isolation_source="virus-infected leaf tissue" FT /note="acronym: SbDV" FT /db_xref="taxon:12049" FT CDS 1..2073 FT /codon_start=1 FT /transl_except=(pos:601..603,aa:OTHER) FT /product="minor coat protein" FT /note="readthrough protein; translated by readthrough of FT in-frame termination codon" FT /db_xref="GOA:B1A440" FT /db_xref="InterPro:IPR001517" FT /db_xref="InterPro:IPR002929" FT /db_xref="UniProtKB/TrEMBL:B1A440" FT /protein_id="ABZ80598.1" FT /translation="MVAVSNVTIQRRRNRRAARSAPRVQLMAIPTTTGATQRRRRQRRR FT RRNNRGGGNISGGSGKAHTFQFSKDGINGSSKGTITFGPSLSECKPLSDGILKAYHEYK FT ITSILLQFISEASSTSSGSIAYELDPHCKYSEIQSLLNKFSITKSGSKRFPTKVINGLE FT WHDTSEDQFKVHYKGNGDAKIAGSFKITIVVLTQNPKXVDGEPGPKPGPDPTPPPAPPP FT EPTPAKHERFIVYTGTLSTLISARQNSDSISLYSIRDQRVRYIEDENANWTYIKAQWYS FT QNSVEAVPMFIYPVPQGTWSIEISCEGYQATSSTTDPHRGKSDGMIAYDDDQNKVWNVG FT VQNNVTISNNKADADWKYGHPNLTINGERFDQNQVVEKDGTVSFHLVTTGPNASFFLVG FT PPVKKIAKYNYCISYGAWTDRDMEFGMVSVVLDEHLEGVRGSQYVRKTLRPGHISVNRS FT HRLQEMPPMREDFSEEDSSSSDNNTYKTDNSPLTVHLVKAGDEENYTTDRSDDVEPTLH FT DADVMKFSGFVGAKDRFTLQGADPIGPGDRSVRRFRPSATLKSAFHSGPTPDELYNAGV FT EQADHDFEHFVSRGKEKLQDEDPMAKLEREAEDLKPDSDNEDNDYDRTAPVFNPADGDP FT WSGIKIKPRLKDQDMRSTLSTGTLKGGSLKPKKEPTPRFEPAPKSVLDRIRRRQV" FT CDS 1..603 FT /codon_start=1 FT /product="major capsid protein" FT /note="coat protein" FT /db_xref="GOA:Q3YB88" FT /db_xref="InterPro:IPR001517" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q3YB88" FT /protein_id="ABZ80596.1" FT /translation="MVAVSNVTIQRRRNRRAARSAPRVQLMAIPTTTGATQRRRRQRRR FT RRNNRGGGNISGGSGKAHTFQFSKDGINGSSKGTITFGPSLSECKPLSDGILKAYHEYK FT ITSILLQFISEASSTSSGSIAYELDPHCKYSEIQSLLNKFSITKSGSKRFPTKVINGLE FT WHDTSEDQFKVHYKGNGDAKIAGSFKITIVVLTQNPK" FT CDS 17..586 FT /codon_start=1 FT /product="putative movement protein" FT /note="P4" FT /db_xref="InterPro:IPR001964" FT /db_xref="UniProtKB/TrEMBL:B1A442" FT /protein_id="ABZ80597.1" FT /translation="MSQYNDDAIVEPHEALHEFSSWLFQRPPAQHSAEEDNDDEGEIIE FT EEAIFPEDQARLTHSSFRRTASMAVPRELSLSGRLYQSASHSLMEYSRPTMNIRSRVSY FT YSSSPRPLPPRQAPSLMSLTHTASTPKFNRYSINSQLQRAVRNDSPPRLSMASNGMIPV FT KTSSRSTIRGMETPRSQAPSRSRSLS" XX SQ Sequence 2073 BP; 626 A; 495 C; 485 G; 467 T; 0 other; atggtcgcgg ttagcaatgt cacaatacaa cgacgacgca atcgtagagc cgcacgaagc 60 gctccacgag ttcagctcat ggctattcca acgaccaccg gcgcaacaca gcgcagaaga 120 agacaacgac gacgaaggag aaataataga ggaggaggca atatttccgg aggatcaggc 180 aaggctcaca cattccagtt ttcgaaggac ggcatcaatg gcagttccaa gggaactatc 240 actttcgggc cgtctttatc agagtgcaag ccactctctg atggaatact caaggcctac 300 catgaatata agatcacgag tatcttatta cagttcatct ccgaggcctc ttccacctcg 360 tcaggctcca tcgcttatga gcttgaccca cactgcaagt actccgaaat tcaatcgcta 420 ctcaataaat tctcaattac aaagagcggt tcgaaacgat tccccaccaa ggttatcaat 480 ggcctcgaat ggcatgatac cagtgaagac cagttcaagg tccactataa ggggaatgga 540 gacgccaaga tcgcaggctc cttcaagatc acgatcgttg tcttaactca gaatcccaaa 600 taggtagacg gagaaccggg gccgaaacca ggtccggacc ccacaccccc accagcacca 660 ccacctgaac cgacgccagc caaacatgaa agattcattg tttacaccgg tacactgtca 720 acactcatca gtgctcgaca gaactcagac agtatatcac tctactcaat tcgagaccag 780 agggtcagat atattgaaga tgagaatgca aactggacgt acatcaaagc gcaatggtat 840 tcacagaatt ctgtggaagc agtaccaatg ttcatctacc cagttccgca aggtacttgg 900 tcaattgaaa tctcttgtga aggctatcag gctacgtcaa gcaccacgga cccccaccgg 960 gggaagtctg atggaatgat tgcttacgac gatgatcaaa ataaggtgtg gaatgttggt 1020 gtacaaaata atgtaaccat ttccaataac aaggccgacg ctgactggaa gtatggtcac 1080 cctaatttaa caattaacgg tgaacgtttt gaccagaacc aggtagtcga gaaagatggc 1140 acagtctcat ttcatttagt aactaccggg cccaacgcga gtttcttctt agttggccct 1200 cccgttaaga agatcgccaa gtacaactac tgtatatcat acggggcttg gacagaccgc 1260 gacatggaat ttggaatggt ctctgttgtt ctcgatgaac atttagaggg tgttagaggt 1320 tctcagtacg ttaggaaaac gctaagacca ggtcacatta gcgtcaatcg ttcccaccga 1380 ttgcaagaaa tgcctcccat gcgagaggat ttcagtgagg aagatagtag tagtagtgat 1440 aataatacat ataaaacgga caattctccc ttaactgttc accttgtaaa agcaggtgac 1500 gaggagaatt atacaacaga tcgatcggac gatgttgaac ccacactcca tgatgctgat 1560 gtcatgaagt tctccgggtt tgttggagct aaagataggt ttacgttgca gggcgctgat 1620 ccaatcggcc ctggtgacag atctgtccgt cgcttcagac cgtctgccac attgaagtct 1680 gcgttccatt cgggaccgac tcctgatgag ttgtacaacg ctggtgttga acaagcggat 1740 cacgacttcg aacactttgt ttctcgaggc aaggagaagc tacaggatga agatccaatg 1800 gccaaactcg aaagagaggc tgaggattta aaacctgata gtgacaacga agataacgat 1860 tatgatcgaa ccgctcctgt gttcaaccca gctgatggtg acccctggtc aggcattaaa 1920 ataaagccta gattaaaaga tcaggatatg aggtccacct tgagcactgg caccttgaaa 1980 ggtggttcac tgaaaccgaa gaaagaacca accccaaggt ttgagccagc gccaaagtcc 2040 gttttagata ggattagacg taggcaagtt taa 2073 //