ID EU418787; SV 1; linear; genomic RNA; STD; VRL; 1377 BP. XX AC EU418787; XX DT 13-FEB-2008 (Rel. 94, Created) DT 13-FEB-2008 (Rel. 94, Last updated, Version 1) XX DE Tobacco etch virus isolate Bodles 9 HC-Pro protein (HC-Pro) gene, partial DE cds. XX KW . XX OS Tobacco etch virus OC Viruses; Riboviria; Potyviridae; Potyvirus. XX RN [1] RP 1-1377 RA Spence A.; RT "HC-Pro Amplification of TEV Infecting Peppers in Jamaica"; RL Unpublished. XX RN [2] RP 1-1377 RA Spence A.; RT ; RL Submitted (21-JAN-2008) to the INSDC. RL Department of Basic Medical Sciences, Biochemistry Section, The University RL of the West Indies, Molecular Biology Bldg., 4 St. Johns Close, Mona, RL Kingston 7, Jamaica XX DR MD5; b03a0d1ec5f19f53bb931f4fce5e07f3. XX FH Key Location/Qualifiers FH FT source 1..1377 FT /organism="Tobacco etch virus" FT /host="Scotch bonnett peppers" FT /isolate="Bodles 9" FT /mol_type="genomic RNA" FT /country="Jamaica:Bodles Agriculture Research Station, St. FT Catherine and UWI Botany Gardens, St. Andrew" FT /db_xref="taxon:12227" FT gene <1..>1377 FT /gene="HC-Pro" FT CDS <1..>1377 FT /codon_start=1 FT /gene="HC-Pro" FT /product="HC-Pro protein" FT /db_xref="GOA:B1A3P2" FT /db_xref="InterPro:IPR001456" FT /db_xref="InterPro:IPR031159" FT /db_xref="InterPro:IPR042308" FT /db_xref="UniProtKB/TrEMBL:B1A3P2" FT /protein_id="ABZ80925.1" FT /translation="SDKSISEAFFIPYSTKFLELRPDGISHECTRGVSVERCGEVAAIL FT TQALSPCGKITCKRCMVETPDIVGSESGESVTNQGKLLTMLREQYPDFPMAEKLLTRFL FT QQKSLVSTNLTACVSVKQLIGDRKQAPFTHVLAVSEILFKGNRLTGTDLEEASTHMLEI FT ARFLNNRTENMRIGHLGSFRNKISSKAHVNNALMCDNQLDQNGNFIWGLRGAHAKRFLK FT GFFTEIDPNEGYDKYVVRKHIRGSRKLAIGNLIMSTDFQTLRQQIQGETIERKEIGNYC FT ISMRNGNYVYPCCCVTLEDGKAQYSDLKHPTKRHLVIGNSGDSKYLDFPVLNEEKMYIA FT NEGYCYMNIFFALLVNVKEEDAKDFTKFIRDTIVPKLGAWPTMQDVATACYLLSILYPD FT VLSAELPRILVDHDNKTMHVLDSYGSKTTGYHMLKMNTTSQLIEFVHSGLESEMKTYNV FT G" XX SQ Sequence 1377 BP; 443 A; 271 C; 309 G; 354 T; 0 other; agcgacaagt caatctctga ggcatttttt ataccatact ctacgaaatt cttggagttg 60 agaccagatg gaatctccca tgagtgtaca agaggtgtat cagttgagcg gtgcggtgag 120 gtggctgcaa tcctgacaca agcactttca ccgtgtggta agatcacatg taaacgttgc 180 atggttgaaa cacctgacat tgttggaagt gagtcgggag aaagcgtcac taaccaaggc 240 aagctcctta caatgttgag agaacagtat ccagatttcc caatggccga gaaactactc 300 acaaggtttt tgcaacagaa atcactagta agcacaaatt tgacggcctg cgtgagcgtc 360 aaacagctca ttggagaccg taaacaagct ccattcacac atgtactggc tgttagcgaa 420 attctgttca aaggcaatag actgacagga actgatctcg aagaggcaag cacgcacatg 480 cttgaaatag caaggttctt aaacaatcgc actgagaata tgcgcattgg ccacctcggt 540 tccttcagaa acaaaatatc atcaaaggcc catgtgaata acgcactcat gtgtgataat 600 caactcgatc agaatgggaa ttttatttgg gggctaaggg gtgcacacgc aaagaggttt 660 ctcaaaggat tttttactga gattgaccca aatgaaggat acgataagta tgtagtcagg 720 aaacatatca ggggtagcag aaagctagca attggcaatc tgataatgtc aactgacttc 780 caaacgctca ggcaacagat tcaaggcgaa actattgagc gtaaagaaat tgggaattac 840 tgcatttcaa tgcgaaacgg taattacgta tacccatgtt gttgtgttac ccttgaagat 900 ggtaaggctc aatactcaga tttaaagcac ccaacaaaga gacatctggt cattggcaac 960 tctggcgatt caaagtacct ggactttcca gttcttaatg aagagaaaat gtatatagct 1020 aacgaaggtt attgctacat gaacattttc tttgctctac tagtgaatgt caaagaagag 1080 gatgcaaagg acttcaccaa gtttataagg gacacaattg ttccaaagct tggagcgtgg 1140 ccaacgatgc aggatgttgc aactgcatgc tacttacttt ctattcttta cccagatgtc 1200 ctgagtgctg agttacccag aattttggtt gatcatgaca acaaaacaat gcatgttttg 1260 gattcgtatg ggtctaaaac gacagggtac cacatgttga agatgaacac aacatcccaa 1320 ctaattgaat tcgttcattc aggattggaa tccgaaatga aaacttataa tgttgga 1377 //