ID EU286798; SV 1; circular; genomic DNA; STD; VRL; 2745 BP. XX AC EU286798; XX DT 25-DEC-2007 (Rel. 94, Created) DT 25-DEC-2007 (Rel. 94, Last updated, Version 1) XX DE Alternanthera yellow vein virus isolate F31 segment DNA A, complete DE sequence. XX KW . XX OS Alternanthera yellow vein virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2745 RA Han F., Wu Z.J., Wu Y.F.; RT "Molecular characterization of begomovirus infecting Eclipta prostrata"; RL Unpublished. XX RN [2] RP 1-2745 RA Han F., Wu Z.J., Wu Y.F.; RT ; RL Submitted (18-NOV-2007) to the INSDC. RL Key Laboratory of Biopesticide and Chemical Biology, Ministry of Education, RL Fujian Agriculture and Forestry University, Institute of Plant Virology, RL Jinshan, Fuzhou, Fujian 350002, China XX DR MD5; baa9733b2e1f6e0df5aa9f3a33839cac. XX FH Key Location/Qualifiers FH FT source 1..2745 FT /organism="Alternanthera yellow vein virus" FT /segment="DNA A" FT /isolate="F31" FT /mol_type="genomic DNA" FT /country="China" FT /collected_by="Fang Han" FT /collection_date="10-Aug-2007" FT /PCR_primers="fwd_seq: agctgcagtgatgtactcccctgt, rev_seq: FT tcactgcagctcaggcagagaatg" FT /db_xref="taxon:337826" FT gene 154..501 FT /gene="av2" FT CDS 154..501 FT /codon_start=1 FT /gene="av2" FT /product="precoat protein" FT /note="AV2" FT /db_xref="GOA:A7DXF1" FT /db_xref="InterPro:IPR002511" FT /db_xref="UniProtKB/TrEMBL:A7DXF1" FT /protein_id="ABY27549.1" FT /translation="MWDPLLNPFPQTVHAFRCMLSVKYLQAVEDTYAPDTLGADLIREL FT IAVIRANNYVEACSRYDHFIKRIEGTTSAQLRQPYGSPCYCPHCPCHSKTAVVEPPHVS FT QAKVVPNVQKP" FT gene 314..1084 FT /gene="av1" FT CDS 314..1084 FT /codon_start=1 FT /gene="av1" FT /product="capsid protein" FT /note="AV1" FT /db_xref="GOA:A9YSI2" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:A9YSI2" FT /protein_id="ABY27550.1" FT /translation="MSKRAADMIISSSGSRVRRRLNFDSPMARRATAPIVRATRKQQWS FT SRPMYRKPRLYRMYRSPDVPYGCEGPCKVQSFEKKHDVSHTGTLLCVSDVTRGSGITHR FT VGKRFCVKSIYIIGKIWMDENIKSKNHTNTVMFWLVRDRRPVTTPYGFGEAFNMYDNEP FT STATIKNDLRDRLQVLHRFSATVTGGQYASKEQAMIKRFWRINNHVVYNHQEKAAYENH FT TENALVLYMACTHASNPVYATLKIRIYFYDSVMN" FT gene complement(1081..1485) FT /gene="ac3" FT CDS complement(1081..1485) FT /codon_start=1 FT /gene="ac3" FT /product="AC3 protein" FT /db_xref="GOA:A7KRP3" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:A7KRP3" FT /protein_id="ABY27551.1" FT /translation="MDSRTGEYITAAQAENGVYTWEITNPLYFKIIKHDSRPLLREHDI FT ITVQIQFNYNLRKALGIHKCFLTCQIWTRLQPQTLSFLRVFKTQVMKYLDNLGVICLNN FT VIRAINHVLWNALHHTLYVNFNHIIKFNIY" FT gene complement(1226..1630) FT /gene="ac2" FT CDS complement(1226..1630) FT /codon_start=1 FT /gene="ac2" FT /product="AC2 protein" FT /db_xref="GOA:A9YSI4" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:A9YSI4" FT /protein_id="ABY27552.1" FT /translation="MRPSSPSTSHCTQVPIKVQHRLAKRKPRRRRVDLRCGCSLYISID FT CHNYGFTHRGVHHCSSGREWRVYLGNNQSPVFQDHQTRQQATPTGTRHHYSSDTVQLQP FT AEGFGDTQMFSDLPDLDSLTTSDIEFLKGL" FT gene complement(1524..2618) FT /gene="ac1" FT CDS complement(1533..2618) FT /codon_start=1 FT /gene="ac1" FT /product="Rep protein" FT /db_xref="GOA:A9YSI5" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:A9YSI5" FT /protein_id="ABY27554.1" FT /translation="MRQPGQFRLNRKNFFLTYSQCPISKEEALQQLINTQTPVNKKFIR FT VCKELHEDGNPHLHALVQFEGKFCITNPRFFDLQSPNSSTQYHCFITDAKSSSDVKAYI FT EKDGDILDWGTFQIDGRSARGGQQSANDAYARAINTGNKEQALDVIRELAPKDYVLQFH FT NLNGNLERIFMPPTQEYISPFNCSSFDQVPEEIEEWAADNVMSAAARPWRPISIVIEGD FT SRTGKTMWARSLGPHNYLCGHIDLSPRVYSNDAWYNIIDDVDPHYVKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPTSSYKEFLDEEKNIGLKNWALKNATFVTINQPL FT YSGSHQSPTQASQEETSQTEG" FT gene complement(2171..2461) FT /gene="ac4" FT CDS complement(2171..2461) FT /codon_start=1 FT /gene="ac4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:A7KRQ6" FT /protein_id="ABY27553.1" FT /translation="METLISMLLCNSKASSASRIRDSSTYSPPIPPPNTTASSPMRSPV FT QTLRHTSRKMETYLTGVPSRLMEGLQEGDSSQQTMLTQEQLTQAIRNRLLM" XX SQ Sequence 2745 BP; 702 A; 570 C; 639 G; 834 T; 0 other; accgatggcc aaaaaaaaat ttatgccggc cccacctggc agcttttgtc tgccactaga 60 caatcccgtc caatcagaat tcagcctgaa agcttaaata aaattggcgc ccgctttaaa 120 tgcttggccg ctacgtttag tgcgttgtcc actatgtggg atccgctttt gaacccgttt 180 ccccagaccg tgcacgcctt tcgttgcatg ctttctgtaa agtatttaca ggccgttgaa 240 gacacatacg ctcctgatac tttaggtgct gatttaatta gggagttaat tgcagtaatt 300 agggcaaata attatgtcga agcgtgcagc agatatgatc atttcatcaa gcggatcgag 360 ggtacgacgt cggctcaact tcgacagccc tatggctcgc cgtgctactg cccccattgt 420 ccgtgccact cgaaaacagc agtggtcgag ccgccccatg tatcgcaagc caaggttgta 480 ccgaatgtac agaagccctg atgtgcctta tggctgtgag ggtccgtgta aggtccagtc 540 atttgaaaaa aaacatgacg ttagtcatac tggcacgttg ttgtgtgtct ctgatgttac 600 cagaggtagt gggattacgc atagagtagg gaagcgtttc tgtgtcaagt caatttacat 660 catagggaag atatggatgg acgagaacat taagtccaag aatcatacta acacggtcat 720 gttctggtta gttagggatc gtcgcccagt tacaacgcct tatggctttg gtgaggcgtt 780 taatatgtat gacaatgagc cctctaccgc aactatcaag aacgatctgc gtgatcgttt 840 gcaggtgtta cacaggtttt ctgccacagt tactgggggt cagtatgcgt ctaaggagca 900 ggctatgatc aagcgtttct ggaggattaa caaccatgtg gtttacaacc atcaggagaa 960 ggcagcttat gaaaatcata ctgagaatgc attagtattg tatatggctt gtactcatgc 1020 tagcaatcct gtgtatgcta cgctgaaaat tagaatatat ttctatgatt ctgtaatgaa 1080 ttaataaata ttgaatttta ttatatgatt gaagtttaca tacagcgtgt ggtgcaatgc 1140 attccatagt acatgattta ttgctctaat tacattgtta agacaaatta caccaagatt 1200 atctaaatac ttcataacct gggtcttaaa gacccttaag aaactcaatg tctgaggttg 1260 taagcgagtc cagatctggc aagtcagaaa acatttgtgt atccccaaag ccttccgcag 1320 gttgtagttg aactgtatct gaactgtaat gatgtcgtgt tcccgtagga gtggcctgct 1380 gtcgtgtttg atgatcttga aatacagggg attggttatt tcccaggtat acacgccatt 1440 ctctgcctga gctgcagtga tgtactcccc tgtgcgtgaa tccatagttg tgacagtcaa 1500 tggagatgta tagtgaacag ccgcaacgca gatcaaccct ccgtctgcga ggtttcctct 1560 tggctagcct gtgttggact ttgatgggaa cctgagtaca gtggctggtt gatggtgacg 1620 aaggtcgcat tctttagggc ccagtttttt agacctatgt ttttttcctc gtcaaggaac 1680 tctttatagg aggatgtcgg accaggattg cagaggaaga ttgttgggat cccgccttta 1740 atttgaacgg gcttcccgta cttagtattg gactgccaat ccctttgggc ccccatgaat 1800 tccttgaaat gtttcacata atgaggatct acatcgtcta ttatgttata ccaggcgtca 1860 ttgctgtaaa ccctaggact taggtcaata tgaccacata ggtaattatg tggacctaat 1920 gatctagccc acattgtttt accagtcctg ctgtcacctt ctatgactat acttattggt 1980 ctccagggcc gcgcagcggc agacattaca ttgtctgcgg cccattcctc aatttcttca 2040 gggacctgat caaacgatga acaattaaaa ggactaatgt attcttgagt tggaggcatg 2100 aagatgcgct ccagatttcc atttaaatta tgaaattgta atacataatc cttaggagct 2160 aactctctta ttacatcaag agcctgttcc ttattgcctg tgttaattgc tcttgcgtaa 2220 gcatcgtttg ctgactgctg tccccctctt gcagaccttc catcaatctg gaaggtaccc 2280 cagtcaagta tgtctccatc tttctcgatg tatgccttaa cgtctgaact ggacttcgca 2340 tcggtgatga agcagtggta ttgggtggag gaattggggg actgtaggtc gaagaatctc 2400 ggattcgtga tgcagaactt gccttcgaat tgcacaagag catggagatg agggtttcca 2460 tcctcgtgta attccttaca aaccctaatg aatttcttgt tcactggggt ttgggtgttg 2520 attaattgct gtagtgcctc ttctttagag atagggcact gtgagtaagt gaggaagaag 2580 ttttttctat ttaatctaaa ttgcccaggc tgacgcatga tgacgtatct gttcacccga 2640 tgggtgctcc ttcaaaactc ttagtcaatg ggtgaatggg tgtataatat atagtgggga 2700 tttttccgga ataaaaaatt tttttttggc catcgtacta atatt 2745 //