ID EU286797; SV 1; circular; genomic DNA; STD; VRL; 2744 BP. XX AC EU286797; XX DT 25-DEC-2007 (Rel. 94, Created) DT 25-DEC-2007 (Rel. 94, Last updated, Version 1) XX DE Alternanthera yellow vein virus isolate F30 segment DNA A, complete DE sequence. XX KW . XX OS Alternanthera yellow vein virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2744 RA Han F., Wu Z.J., Wu Y.F.; RT "Molecular characterization of begomovirus infecting Eclipta prostrata"; RL Unpublished. XX RN [2] RP 1-2744 RA Han F., Wu Z.J., Wu Y.F.; RT ; RL Submitted (18-NOV-2007) to the INSDC. RL Key Laboratory of Biopesticide and Chemical Biology, Ministry of Education, RL Fujian Agriculture and Forestry University, Institute of Plant Virology, RL Jinshan, Fuzhou, Fujian 350002, China XX DR MD5; 1b6ae450ee7020038c5c57f108547d34. XX FH Key Location/Qualifiers FH FT source 1..2744 FT /organism="Alternanthera yellow vein virus" FT /segment="DNA A" FT /isolate="F30" FT /mol_type="genomic DNA" FT /country="China" FT /collected_by="Fang Han" FT /collection_date="10-Aug-2007" FT /PCR_primers="fwd_seq: agctgcagtgatgtactcccctgt, rev_seq: FT tcactgcagctcaggcagagaatg" FT /db_xref="taxon:337826" FT gene 154..501 FT /gene="av2" FT CDS 154..501 FT /codon_start=1 FT /gene="av2" FT /product="precoat protein" FT /note="AV2" FT /db_xref="GOA:A9YSH5" FT /db_xref="InterPro:IPR002511" FT /db_xref="UniProtKB/TrEMBL:A9YSH5" FT /protein_id="ABY27543.1" FT /translation="MWDPLLNPFPQTVHGFRCMLSVKYLQVVEDTYAPDTLGADLIREL FT IAVIRANNYVEACSRYDHFIKRLEGTSSSQLRQPYGSPCFCPHCPCHSKTAVVEPPHVS FT QAKVVPNVQKP" FT gene 314..1084 FT /gene="av1" FT CDS 314..1084 FT /codon_start=1 FT /gene="av1" FT /product="capsid protein" FT /note="AV1" FT /db_xref="GOA:A9YSH6" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:A9YSH6" FT /protein_id="ABY27544.1" FT /translation="MSKRAADMIISSSGSRVRRRLNFDSPMARRASAPIVRATRKQQWS FT SRPMYRKPRLYRMYRSPDVPYGCEGPCKVQSFEKKHDVSHTGTLSCVSDVTRGSGITHR FT VGKRFCIKSIYIIGKIWMDENIKSKNHTNTVMFWLVRDRRPVTTPYGFGEAFNMYDNEP FT STATIKNDLRDRLQVLHRFSATVTGGQYASKEQAMIKRFWRINNHVVYNHQEKAAYENH FT TENALVLYMACTHASNPVYATLKIRIYFYDSVMN" FT gene complement(1081..1485) FT /gene="ac3" FT CDS complement(1081..1485) FT /codon_start=1 FT /gene="ac3" FT /product="AC3 protein" FT /note="AC3" FT /db_xref="GOA:A9YSH7" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:A9YSH7" FT /protein_id="ABY27545.1" FT /translation="MDSRTGEYITAAQAENGVYTWEITNPLYFKIIKHDSRSFLREHDI FT ITVQIQFNYNLRKALGIHKCFLTCQIWTRLQPQTLSFLRVFKTQVMKYLDNLGVICLNN FT VIRAINHVLWNALHHTLYVNFSHIIKFNIY" FT gene complement(1226..1630) FT /gene="ac2" FT CDS complement(1226..1630) FT /codon_start=1 FT /gene="ac2" FT /product="AC2 protein" FT /note="AC2" FT /db_xref="GOA:A9YSH8" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:A9YSH8" FT /protein_id="ABY27546.1" FT /translation="MRPSSPSTSHCTQVPIKVQHRLAKRKPRRRRVDLRCGCSLYISID FT CHNYGFTHRGVHHCSSGREWRVYLGNNQSPVFQDHQTRQQVIPTGTRHHHSSDTVQLQP FT AEGFGDTQMFSDLPDLDSLTTSDIEFLKGL" FT gene complement(1524..2618) FT /gene="ac1" FT CDS complement(1533..2618) FT /codon_start=1 FT /gene="ac1" FT /product="Rep protein" FT /note="AC1" FT /db_xref="GOA:A9YSH9" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:A9YSH9" FT /protein_id="ABY27548.1" FT /translation="MRQPGQFRLNRKNLFLTYSQCPISKEEALQQILNTQTPVNKKFIR FT VCRELHEDGNPHLHALVQFEGKFQLTNPRFFDLQSPNSSAQYHCFITDAKSSSDVKAYI FT EKDGDILDWGTFQIDGRSARGGQQTANDAYARAINTGNKEQALDVIRELAPKDYVLQFH FT NLNGNLERIFMPPTQEYISPFNCSSFDQVPEEIEEWAADNVMSAAARPWRPISIVIEGD FT SRTGKTMWARSLGPHNYLCGHIDLSPRVYSNEAWYNIIDDVDPHYVKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPTSSYKEFLDEEKNIGLKNWALKNATFVTINQPL FT YSGSHQSPAQASQEETSQTEG" FT gene complement(2171..2461) FT /gene="ac4" FT CDS complement(2171..2461) FT /codon_start=1 FT /gene="ac4" FT /product="AC4 protein" FT /note="AC4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:A9YSI0" FT /protein_id="ABY27547.1" FT /translation="METLISMLLCNSRGNSNSRIRDSSTYSHPIPPPNTTASSPMLSPV FT QTLRHTSRRMETYLTGVPSRLMEGLQEGDSRQQTMLTQEQLTQAIRNKLLM" XX SQ Sequence 2744 BP; 697 A; 570 C; 634 G; 843 T; 0 other; accgatggcc aaaaaaaaat ttatgccggc cccacctggc agcttttgtc tgccactaga 60 caatcccgtc caatcagatt tcagtctgaa agcttaaata aaattggcgc ccgctttaaa 120 tgcttggccg ctacgtttag tgcgctgtcc actatgtggg atcctctttt gaacccgttt 180 ccccagaccg tgcacggctt tcgttgcatg ctttctgtaa agtatttaca ggtcgttgaa 240 gacacatacg ctcctgatac tttaggtgct gatttaatta gagagttaat tgcagtaatt 300 agggccaata attatgtcga agcgtgcagc cgatatgatc atttcatcaa gcggctcgag 360 ggtacgtcgt cgtctcaact tcgacagccc tatggctcgc cgtgcttctg cccccattgt 420 ccgtgccact cgaaaacagc agtggtcgag ccgccccatg tatcgcaagc caaggttgta 480 ccgaatgtac agaagccctg atgtgcctta tggctgtgag ggtccgtgta aggtccagtc 540 atttgaaaaa aaacatgacg ttagtcatac tggcacgttg tcgtgtgtct ctgatgttac 600 cagaggtagt gggattacgc atagagtagg gaagcgtttt tgcatcaagt caatttacat 660 catagggaag atatggatgg atgagaacat taagtccaag aatcatacta acacggtcat 720 gttctggtta gttagggatc gccgcccagt tacaacgcct tatggctttg gtgaggcgtt 780 taatatgtat gacaatgagc cctctaccgc aactatcaag aacgatctgc gtgatcgttt 840 gcaggtgtta cataggtttt ctgccacagt tactgggggt cagtatgcgt ctaaggagca 900 ggctatgatc aagcgtttct ggaggattaa caaccatgtt gtttacaacc atcaggagaa 960 ggcagcttat gaaaatcata ctgagaatgc attagtattg tatatggctt gtactcatgc 1020 tagcaatcct gtgtatgcta cgctgaaaat tagaatatat ttctatgact ctgtaatgaa 1080 ttaataaata ttgaatttta ttatatgact gaagtttaca tacaaagtat ggtgcaatgc 1140 attccatagt acatgattta ttgctctaat tacattgtta agacaaatta caccaagatt 1200 atctaaatac ttcataactt gggtcttaaa gacccttaag aaactcaatg tctgaggttg 1260 taagcgagtc cagatctggc aagtcagaaa acatttgtgt atccccaaag ccttccgcag 1320 gttgtagttg aactgtatct gaactgtgat gatgtcgtgt tcccgtagga atgacctgct 1380 gtcgtgtttg atgatcttga aatacagggg attggttatt tcccaggtat acacgccatt 1440 ctctgcctga gctgcagtga tgtactcccc tgtgcgtgaa tccatagttg tgacagtcga 1500 tggagatgta tagtgaacag ccgcaacgca gatcaaccct ccgtctgcga ggtttcctct 1560 tggctagcct gtgctggact ttgatgggaa cctgagtaca gtggctggtt gatggtgacg 1620 aaggtcgcat tctttagggc ccagtttttt agacctatgt ttttctcctc atcaaggaac 1680 tctttatagg aggatgtcgg accaggattg cagaggaaga ttgttgggat cccgccttta 1740 atttgaacgg gcttcccgta tttagtattg gactgccaat ccctttgggc ccccatgaat 1800 tccttgaaat gtttcacgta atgaggatct acatcgtcta ttatgttata ccaggcctca 1860 ttgctgtaaa ccctaggact aaggtcaata tgaccacata ggtaattatg tggacctaat 1920 gatctagccc acattgtttt accagtcctg ctgtcacctt ctatgactat acttattggt 1980 ctccagggcc gcgcagcggc agacatgaca ttgtctgcgg cccattcctc aatttcctca 2040 gggacctgat caaacgatga acaattaaaa ggactaatgt attcttgggt tggaggcatg 2100 aatatgcgct ccagattacc atttaaatta tgaaattgta atacataatc cttaggagct 2160 aactctctta ttacatcaag agcttgttcc ttattgcctg tgttaattgc tcttgcgtaa 2220 gcatcgtttg ctgtctgctg tccccctctt gcagaccttc catcaatctg gaaggtaccc 2280 cagtcaagta tgtctccatc cttctcgatg tatgccttaa cgtctgaact ggacttagca 2340 tcggtgatga agcagtggta ttgggcggag gaattgggtg actgtaggtc gaagaatctc 2400 ggattcgtga gttggaattt cccctcgaat tgcacaagag catggagatg agggtttcca 2460 tcctcatgta gttctctgca aaccctaatg aatttcttgt ttacaggggt ttgtgtgttt 2520 aggatttgct gtaatgcctc ttctttagag atagggcatt gtgagtaggt gaggaagagg 2580 ttttttctat ttaatctaaa ttgcccaggc tgacgcatga tgacgtttgt ttacacccga 2640 tgggagctct tctaaaactc tatgtcaatg ggtgtatagg tgtgtattat atagtgggga 2700 tttttccgga ataaaaaatt tttttttggc catcgtctaa tatt 2744 //