ID EF589099; SV 1; linear; genomic RNA; STD; VRL; 3876 BP. XX AC EF589099; XX DT 11-APR-2008 (Rel. 95, Created) DT 11-APR-2008 (Rel. 95, Last updated, Version 1) XX DE American grass carp reovirus strain AGCRV_PB01-155 segment 2, complete DE sequence. XX KW . XX OS American grass carp reovirus OC Viruses; Riboviria; Reoviridae; Spinareovirinae; Aquareovirus. XX RN [1] RP 1-3876 RX DOI; 10.1016/j.virol.2007.12.006. RX PUBMED; 18191982. RA Mohd Jaafar F., Goodwin A.E., Belhouchet M., Merry G., Fang Q., RA Cantaloube J.F., Biagini P., de Micco P., Mertens P.P., Attoui H.; RT "Complete characterisation of the American grass carp reovirus genome RT (genus Aquareovirus: family Reoviridae) reveals an evolutionary link RT between aquareoviruses and coltiviruses"; RL Virology 373(2):310-321(2008). XX RN [2] RP 1-3876 RA Mohd Jaafar F., Goodwin A.A.E., Belhouchet M., Merry G., Fang Q., RA Cantaloube J.F., Biagini P., De Micco P., Mertens P.P.C., Attoui H.; RT ; RL Submitted (02-MAY-2007) to the INSDC. RL Arbovirology, Institute for Animal Health, Ash Road, Pirbright, Woking, RL Surrey GU24 0NF, UK XX DR MD5; 1a180ec6e8b3da965aeddde176db62f2. DR EuropePMC; PMC4284399; 25348270. XX CC GenBank Accession Numbers EF589098-EF589108 represent the complete CC genome of American grass carp reovirus strain AGCRV_PB01-155. XX FH Key Location/Qualifiers FH FT source 1..3876 FT /organism="American grass carp reovirus" FT /segment="2" FT /host="Ctenopharyngodon idella" FT /strain="AGCRV_PB01-155" FT /mol_type="genomic RNA" FT /country="USA" FT /db_xref="taxon:465447" FT CDS 14..3838 FT /codon_start=1 FT /product="VP2" FT /note="pol; RNA polymerase" FT /db_xref="GOA:B2BNE0" FT /db_xref="InterPro:IPR007097" FT /db_xref="InterPro:IPR012915" FT /db_xref="UniProtKB/Swiss-Prot:B2BNE0" FT /protein_id="ABV01040.1" FT /translation="MEDLFNALPQPLQQLSLALAGEIPLNDELFQAAASTWHTRQRSET FT YHLLDRLRFSTPIVTPQAIYRDLPWRNCYRINQDRVERIPTTNASDDVYVPNSDISTLL FT SPLFSIPTYGTLHPSIEKDALELRADSARCASTFYKIASSQARQVKLDPTRMLEFLLLL FT VATPRVNSGLDTDQPSMRDPTKSPALHAIWQIMQYYKVDSKYHAPALIVSTGAVWWIPP FT PGKRNVVSVQYLLTDLVNLAIIARMTDMHPTLGLCAARVYIQAATTDSYTHTLLKLKGV FT FPALSIHSMYRQKGFGGKAPDIQWTEPRTKYQFKWVGVTHLHDGLRPRAPVRDEAVRKL FT LTEYQLADIMAPIVEMRNQHKHHDHDSVRFVRDVMALTSGMYLVRQPTMSVLQEYSQVP FT DIKQPIPPSAWTGTVGNVRYLNKDVTGPARWLYNTWREAAQEIAQDRTWHDPVNQFIMG FT SQYVTARGGSGSSLKHSLTVTGLVLPEFSESSVKRSSKIYQAAQIARIPFTLLTAAIHA FT EVVMAIRNQVQRRARSIMPLNVVQQAVSAPHTLVANYINKHMNMSTTSGSVVTDKVVPL FT LLYASTPPRTVVNVDIKACDASITYDYFLSLICGAMHEGFEVGDNHASFMGVPSSIIMD FT KRSALAPYSRTVSGLQTMVQHLSQMYANGFRYSVTDAFSSGNKFSFPTSTFPSGSTATS FT TEHTANNSTMMSYFLAVHAPQHIKSPNMKRVLSDMTIQRNYVCQGDDGVLLLPDEAASK FT ISAEDMDELLTCLKDYGTSFGWVYDIDWSDSAEYLKLFALCGCRVPNVSRHPPVGKEYA FT SPTTDEIWPSLIDIVVGHHLNGVMDLMNWREWLRFSWAFACYASRGAYTDKYGETHIAQ FT YPWWTFVYLGIPPILLPGQTPFIHSLFMPPGDQAMFAILNNWRDLISTNTTTTFPPLKH FT PHHTWHLADVPTLLDSYGVYAGYHAAQHPRRPVAQPETANSESIEQITGALTDYLLYDP FT ILKARVNTGRHNWSQLSQSIGLNIGGRVPSLMDVPGKWVAAGREAEKPPPSAIVYMFKS FT LNRTIRRPSKHFSKLLELYIRVKVVLGAPKPLAIDPDIPQVAGADPHNDDPWFKYVGLG FT DIPTSTRRYFGESLFVGRVVSGLDVEAVDAALLRLKILGAPPAAYIALLNGIGMSNSEA FT NQIAGRVSLANAQTVQIGRVVNLSTPSSWMTLDTAPYIQYHTYDFKPGVTNPSAQSREK FT FIWLSPILKLLCATAAMSIAGPVREAYVLDIHGSAASLSGNFREWMRAA" XX SQ Sequence 3876 BP; 952 A; 1182 C; 879 G; 863 T; 0 other; gttttaaagc acaatggagg acttgttcaa cgccttacca caaccactac agcaactctc 60 tttagcatta gctggagaaa taccactcaa cgacgaacta ttccaagcag ccgcctccac 120 ctggcatacc aggcaacgtt cagagacgta tcacctgctc gacaggctcc gtttctccac 180 acctatagtc acgccccagg ctatatatag ggacctaccc tggcgcaact gttaccgtat 240 caaccaggat cgtgtcgagc gcatcccgac caccaacgcc tccgatgatg tttatgtacc 300 caactctgac atcagcaccc tactctcacc cttatttagc atacccactt acggtacgct 360 ccacccatca atcgagaagg atgcccttga gctgagagca gactcggccc gctgtgcttc 420 tacgttttat aagatagcat cctcccaagc tcgtcaggtt aaactggacc cgacacgcat 480 gctcgaattt ctgctgctac tagtagcgac accgcgagtt aactccggct tggacaccga 540 ccagccctct atgcgtgatc caacaaagtc acctgccctg catgcgatat ggcagatcat 600 gcagtactac aaagtagact cgaaatatca cgcccccgcc ctgattgtca gtaccggtgc 660 tgtgtggtgg atcccccctc ctggcaagcg caatgtggtg tccgtacaat acttgcttac 720 agacctggtc aatttggcaa ttatcgcacg tatgactgac atgcacccca ctctcgggtt 780 atgcgcagcc agagtctaca tacaggcggc cacgactgac agttacaccc acacactcct 840 taagctcaag ggtgttttcc ccgccctctc catccattcc atgtacaggc agaaagggtt 900 cggtggcaag gcacctgata tacaatggac ggaaccgcgg actaagtacc agttcaaatg 960 ggtcggtgtc acgcatctac acgacgggtt acgtccacga gcccccgtgc gcgatgaagc 1020 tgtgcgtaag ctcctaaccg aataccaact ggcggacatc atggcaccta tagtagagat 1080 gaggaaccag cacaaacacc acgaccacga ttcggtacgt tttgttcgcg acgtcatggc 1140 cctgaccagt ggtatgtacc tcgtgcgaca gccaacgatg tccgtgctcc aggagtactc 1200 acaagttcca gacataaagc agcccatccc accgtctgct tggactggta ctgtcggtaa 1260 tgtcagatat ttaaacaagg acgtcacggg tccagctcgt tggttataca acacgtggcg 1320 agaggcagcc caagaaatcg cccaggatag gacttggcac gatccggtga atcaattcat 1380 catgggctca caatacgtca ctgcacgtgg aggatccggt tcgtccctca aacattccct 1440 cacggtcacg ggcctcgtgc taccagagtt ttctgagtca agcgtcaaac gatcatctaa 1500 aatataccaa gcagcccaaa ttgcccggat ccccttcact ttgctcaccg cagccattca 1560 tgcagaggtg gtcatggcca ttaggaatca ggtccaacgt cgcgcccgct ccatcatgcc 1620 cctcaacgtt gtccaacaag ctgtgtcagc cccacatacc ctcgtcgcca actacatcaa 1680 caagcatatg aacatgtcga cgacatccgg cagtgtggtc actgataaag tcgtccctct 1740 cctactgtac gcctcaacac cgcccagaac tgtcgtcaat gtcgacatca aagcctgcga 1800 cgcatcaatc acgtacgact acttcctatc gctcatttgc ggagcaatgc acgagggatt 1860 cgaagtcggc gacaatcatg catccttcat gggagtaccc tcatccataa tcatggataa 1920 acgcagcgcg ttagcgccat actcacgtac cgtatccgga ctgcaaacca tggtccagca 1980 cctgtcccaa atgtacgcca acggtttccg ttactcggtc accgacgcct tctccagtgg 2040 taacaaattc tccttcccca cttcaacttt cccctctgga tccacggcca catccaccga 2100 acataccgcc aataatagca ccatgatgtc ctacttcctc gcggttcacg cacctcagca 2160 catcaagtcc ccaaacatga agcgtgtgtt gtccgacatg accatccaac gtaattacgt 2220 ttgccagggg gatgatggtg ttctgctact acctgacgag gccgcttcga agatcagtgc 2280 tgaggacatg gacgaattgc tgacatgttt gaaggactat ggcacttcgt tcggctgggt 2340 gtatgacatc gactggtccg actctgctga gtatttaaaa ctgttcgccc tgtgcggttg 2400 ccgagttccc aacgttagcc gacacccacc tgtaggtaag gagtacgctt cgcccactac 2460 cgatgaaatc tggcccagtc tcatagatat tgtggttgga catcacctga acggtgtcat 2520 ggacttgatg aactggcgtg aatggttacg tttcagctgg gcgttcgcat gctacgcgtc 2580 acgaggtgcg tacaccgata agtacggcga aacgcatata gcgcagtatc catggtggac 2640 gttcgtatat ctcggcatcc cacccattct tctgcccggt caaacaccct tcattcattc 2700 tctcttcatg ccaccaggtg accaggctat gttcgcgata ctcaataact ggcgagattt 2760 aatcagcaca aacaccacga ccacgtttcc accactaaaa cacccacacc acacctggca 2820 tctggcagac gttccgacac tattggactc atacggagtg tatgctggct atcacgcagc 2880 acaacacccc cgccgacctg ttgcccaacc tgagacggct aattccgaat ccatagagca 2940 aatcactggt gcgctgacgg actacctcct atatgaccct atcctcaagg cacgtgtcaa 3000 tactggtcgt cacaattggt cacagctgtc gcagtctata ggcctgaaca tcggcggtcg 3060 tgtgccatcg ctcatggacg taccaggtaa atgggtagct gcaggaagag aggcggaaaa 3120 accaccccca tcggcgatcg tgtacatgtt taagtcactg aaccggacca tcaggcgtcc 3180 cagcaaacac ttctccaaat tgttggagct atacattagg gttaaagtcg tgctgggcgc 3240 cccaaaaccg ttagcaatcg atccggacat tccacaggtc gcaggcgcag atccccacaa 3300 tgacgacccc tggttcaaat acgtcggctt gggtgacata cctacatcaa ccagacgata 3360 cttcggggaa tcgttgttcg tcggacgtgt tgtgtcaggg ctggacgtag aagctgtgga 3420 cgccgcgctg ttacgcctga agattctcgg cgccccccct gcagcctaca tcgcactgct 3480 caacggcata ggtatgtcta actccgaagc aaaccaaata gcaggacggg tatctctagc 3540 gaacgcgcag acggtccaaa taggacgtgt ggtcaacctg tccaccccgt catcttggat 3600 gactctcgac actgctccgt acattcaata ccacacgtac gatttcaaac cgggagtgac 3660 caatccatca gcccagtcac gcgagaagtt catttggctc agtcccatcc tcaaactctt 3720 atgtgccacc gctgccatgt caatcgcagg tcccgtacgc gaagcctacg ttctcgacat 3780 ccacggtagc gccgcttcac tgagtggtaa tttccgcgaa tggatgaggg cagcgtagtg 3840 gtcccctagg cgcgttctct acgtgctata ttcatc 3876 //