ID EF545140; SV 1; linear; genomic RNA; STD; VRL; 3454 BP. XX AC EF545140; XX DT 12-JUL-2008 (Rel. 96, Created) DT 12-JUL-2008 (Rel. 96, Last updated, Version 1) XX DE Beet soil-borne virus isolate IM segment RNA 2, complete sequence. XX KW . XX OS Beet soil-borne virus OC Viruses; Riboviria; Virgaviridae; Pomovirus. XX RN [1] RP 1-3454 RX DOI; 10.1111/j.1439-0434.2007.01373.x. RX AGRICOLA; IND44079379. RA Wang B., Li M., Han C., Li D., Yu J.; RT "Complete Genome Sequences of Two Chinese Beet soil-borne virus Isolates RT Provide Evidence that the Genome is Highly Conserved"; RL J. Phytopathol. 156(7-8):487-488(2008). XX RN [2] RP 1-3454 RA Han C.; RT ; RL Submitted (10-APR-2007) to the INSDC. RL Plant Pathology, China Agricultural University, No.2 Yuanmingyuan West RL Road, Haidian District, Beijing 100094, China XX DR MD5; 92b56d69bd1cd33164f684f3a40e1987. DR RFAM; RF00233; Tymo_tRNA-like. DR RFAM; RF01080; UPD-PKib. XX CC GenBank Accession Numbers EF545138, EF545140, and EF545142 CC represent the complete genome of Beet soil-borne virus isolate IM. XX FH Key Location/Qualifiers FH FT source 1..3454 FT /organism="Beet soil-borne virus" FT /segment="RNA 2" FT /host="sugar beet" FT /isolate="IM" FT /mol_type="genomic RNA" FT /country="China:Inner Mongolia" FT /db_xref="taxon:46436" FT 5'UTR 1..382 FT CDS 383..3178 FT /codon_start=1 FT /transl_except=(pos:875..877,aa:OTHER) FT /product="104K protein" FT /note="readthrough protein" FT /db_xref="GOA:B4X9E0" FT /db_xref="InterPro:IPR001337" FT /db_xref="UniProtKB/TrEMBL:B4X9E0" FT /protein_id="ABU63614.1" FT /translation="MVDPRYEGWNQREAIRAKKRRFVSYDTFMDLIVNWREVRVGIIEH FT SATILSQVSRLGEANFYGRNKRFGRVDTNGDVFYVDLSEARIRKILDNIIIALQTTSGE FT GRAKRLGKEASTTAGAEDSALNVAHQLAELAELMASDQFIEDACFTREKFEHEVGLRWV FT EXQSTAPPVKVDVRAEIDCINNRMKAAARLGLLPGQERHGDAKQTINYDDLDFALNRVA FT GNLLPQTLALERCVESVPETFKDSEDRIDIKGGNPVGETVAKSLIDSHDVKVKKDIGVD FT GDGLAWVLAAIFAFLSMLFFSLMCFGSRRFLRLAIRREGKPGGGTMMFLSRIFTNIRYR FT LRDRAVRLVSRMRYSKRSRYSRSDMRRYLNDYKFSYIPWVADDFMSSDDKKVVADQNAF FT VEAVKLVDEGDTDLVLDAVKRVKEIIQDYLSFTPDFLEIIEMKAAFVVSRKVSIINVPE FT ERDILNLQDKAFDPISCGMPDVQQCSMEEVIKFDLQEVNCGATDDQTSLKSYVDLLRGL FT QYMFSLVGTVKFIAVYMAYSGKQYKCVAEAYASDLEMRKSSVDSATNGTVEKEKSSYVD FT EMCLALAILFAMPAFISLIKSGGVVFRYFTHGGGPAARRRLRESLNELDNLEFQNRLNR FT LREGAEDLGERSESSSTIEAFERRLEMLREGDDTGNEGNVAVDEIRSDTAPGTNTLPNA FT SFNVGSAPISGLAVIPCIGFPDSASEQRFARTQGKLLRSVRNDNDFISRSTPEQQIETV FT FRRDAADTLSNGSSFSSVVLDSDETFSMEKLEVLNKNSYSEVPGEMFTIMKGENVSHAT FT VKLGNEDVVVVNADTDSPTVIAANSLSKLHKDKGIEFGTFNKEKILQISSANIESSDKT FT VSSSKTNNTVRDFTKVLKVIGMAGGRKSSKPGAAKAASSSSSVEVATSTEAMKTPMRQL FT I" FT CDS 383..877 FT /codon_start=1 FT /product="19K protein" FT /note="coat protein" FT /db_xref="GOA:B4X9E1" FT /db_xref="InterPro:IPR001337" FT /db_xref="UniProtKB/TrEMBL:B4X9E1" FT /protein_id="ABU63615.1" FT /translation="MVDPRYEGWNQREAIRAKKRRFVSYDTFMDLIVNWREVRVGIIEH FT SATILSQVSRLGEANFYGRNKRFGRVDTNGDVFYVDLSEARIRKILDNIIIALQTTSGE FT GRAKRLGKEASTTAGAEDSALNVAHQLAELAELMASDQFIEDACFTREKFEHEVGLRWV FT E" FT 3'UTR 3179..3454 XX SQ Sequence 3454 BP; 970 A; 583 C; 863 G; 1038 T; 0 other; ggtaatttta cttcttcgcc gtttatttaa cacagaagaa gaaaaaattt ccaatttttt 60 gttgcataga taaaacatac ggacaggtat cggtgttttt gaagtgtaac ttaaaatcgg 120 tttttatagt attattggtg tacaggcagg tccgagcact aatatttacc atataaactg 180 tattgcgttg acggaggcgt aagaaaaact atactttcgt ttgattcgct cgatttggcg 240 agtaaaatat aaatcatatc cggtaataat tgatccattt tccagtctac gtacctctat 300 tgaggagcgt gctattggag gtataactcg tagtgatcaa gcgccgagac gtgttgcaat 360 tcccattacg tcatctatta agatggttga tccgcggtat gaagggtgga accaacgtga 420 ggctataaga gccaagaagc gaaggtttgt atcttacgat acttttatgg atttaatcgt 480 taattggcga gaggtgcggg tcggtattat agagcactcc gctactatac tgtcgcaggt 540 tagtaggttg ggggaagcaa atttttacgg acgtaataag cgcttcggaa gagttgacac 600 taacggtgac gttttttatg ttgatttgag tgaggccagg ataagaaaaa ttttagataa 660 cataattatt gctttacaga ctacttccgg tgaaggacgc gctaaacgat taggaaagga 720 ggcgagcacg acagcaggcg cagaagatag cgctctgaat gtggcacatc aactcgccga 780 gctagccgag cttatggcct ccgatcagtt tattgaagac gcttgcttca cgagagaaaa 840 gtttgagcat gaagttggtt tgcgctgggt tgaatagcaa tcaactgctc cgccggttaa 900 agtggatgta cgtgctgaaa ttgattgtat taacaatcga atgaaagcag cggcgcgttt 960 aggtctacta ccggggcagg agcgacacgg tgacgcgaaa caaactataa attatgatga 1020 tctggatttt gctttgaata gggttgctgg taatttgtta ccgcagactt tggctttgga 1080 gcggtgcgtt gagtccgttc ctgaaacttt taaagattca gaggaccgaa ttgacataaa 1140 aggcggtaat cccgtcggtg aaacggttgc gaaatctctg attgattctc atgacgttaa 1200 ggtcaaaaag gatataggag ttgacgggga tggtttagcc tgggttttgg cggctatttt 1260 cgcttttctt tctatgttgt ttttctcctt gatgtgtttt gggagtagga ggtttctgcg 1320 tctggcgatt cgacgtgagg gtaaacctgg gggaggtacg atgatgtttt tatcaagaat 1380 ttttacaaac attagatatc gtctgagaga tcgcgctgtg aggcttgtct cgcggatgcg 1440 gtattctaaa cgctcgaggt atagtcgtag cgatatgcga cgttatctta atgattataa 1500 attcagttac ataccttggg ttgccgatga ttttatgagt agcgacgata agaaggttgt 1560 ggcagatcag aatgcttttg tggaagctgt taagcttgtg gacgaaggtg acactgattt 1620 ggtattagat gcagtaaaac gtgttaagga aataatccaa gactatttga gttttactcc 1680 cgactttctt gaaatcattg agatgaaagc ggcctttgtg gtgtcgagga aggttagcat 1740 tattaacgtt ccggaagagc gcgacatact taatctccag gataaagctt ttgatcctat 1800 ttcctgcggc atgcctgatg tacaacaatg cagtatggag gaggtgataa agtttgatct 1860 acaggaggta aattgtggcg ccactgatga tcaaacgtcg ttaaaatcat atgtcgatct 1920 actaagagga ttgcagtata tgttttcact tgtaggtacg gtgaagttta tagctgtgta 1980 tatggcttat tctgggaaac aatacaagtg tgtggccgaa gcttacgcta gcgatttaga 2040 aatgagaaaa tcgtccgtag actccgccac gaacggtact gttgagaaag aaaaatcttc 2100 ttatgtagat gagatgtgtt tagcgttagc aattttattt gcgatgccag ctttcatttc 2160 tctgattaaa tcaggaggtg ttgtttttcg ctattttacc cacggaggag gcccggcagc 2220 gcgtagacgc ttaagggaat ctcttaatga gttggataat ttagagtttc aaaaccgttt 2280 gaatcgtctt cgcgaaggcg ctgaggattt gggagagcgt tcagagtcat cgtctaccat 2340 agaagctttt gaaagacgtt tggaaatgtt gagggaagga gatgatactg ggaatgaagg 2400 caacgttgct gtggatgaaa ttcgtagcga caccgcccct ggtaccaaca ccttgccgaa 2460 cgcatctttt aatgtcggtt cagctcctat tagtggttta gctgttatac cttgcattgg 2520 ttttccggac agtgcgtcgg agcaacgttt tgctcggact caaggcaaac ttttgaggag 2580 tgtaaggaat gacaacgatt ttataagtcg tagtactcct gaacagcaga tcgagacggt 2640 gtttcgacgg gatgctgcgg acacgttatc taacggctcc agtttttctt ccgtagtttt 2700 agactcggat gaaacattta gcatggaaaa attagaagtt ctaaataaga attcgtatag 2760 tgaagtgcct ggtgaaatgt tcactattat gaagggtgag aatgtatctc acgctacggt 2820 taagcttgga aacgaagatg tggttgtggt gaatgctgat acagattctc ctacagttat 2880 agctgcgaat tcgttatcca aacttcataa agataaaggc atcgagttcg gaacttttaa 2940 caaagagaag atattacaaa tttccagtgc taacattgag agttcggata aaacagtgtc 3000 ttcatcaaaa accaataaca cagtacgtga ctttactaaa gttttgaagg ttattggaat 3060 ggctggtggc agaaaatctt ccaaaccggg agcagcgaaa gctgcttctt cttcgtctag 3120 cgttgaagta gctacgtcga cggaagctat gaaaactccc atgagacaat tgatttaaat 3180 tgttcttggg ttttatgatt aattattatt attaatttta aataaaaaat gattatttgg 3240 cgtgatcaac caacgtgggt tatacgataa taaccggtgc ttttatgttc accgaaatcg 3300 aacatacgtt ttatagacct gcagtcgcta ttaagataat taacaaaaac ttaatatttg 3360 acttatgtag gtgagagtag tttctctcgg tcatcatcac acgatgatcc tgtggggtgc 3420 aaatcccccc cttaacttga gggaaatcaa gccc 3454 //