ID   EF544603; SV 1; circular; genomic DNA; STD; VRL; 2745 BP.
XX
AC   EF544603;
XX
DT   16-JUL-2007 (Rel. 92, Created)
DT   18-JUL-2007 (Rel. 92, Last updated, Version 2)
XX
DE   Alternanthera yellow vein virus isolate LC1 segment DNA A, complete
DE   sequence.
XX
KW   .
XX
OS   Alternanthera yellow vein virus
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-2745
RA   Jia S., Wu Z.;
RT   "Characterization of Eclipta-infecting begomoviruses (genus begomovirus,
RT   family geminiviridae) from Fujian, China";
RL   Unpublished.
XX
RN   [2]
RP   1-2745
RA   Wu Z., Jia S.;
RT   ;
RL   Submitted (10-APR-2007) to the INSDC.
RL   Key Laboratory of Biopesticide and Chemical Biology, Ministry of Education,
RL   Fujian Agriculture and Forestry University, Fuzhou, Fujian 350002, China
XX
DR   MD5; 6fae6e72c9267de9f85cd9b7db550536.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2745
FT                   /organism="Alternanthera yellow vein virus"
FT                   /segment="DNA A"
FT                   /isolate="LC1"
FT                   /mol_type="genomic DNA"
FT                   /country="China"
FT                   /collected_by="Suping Jia"
FT                   /collection_date="10-Oct-2006"
FT                   /db_xref="taxon:337826"
FT   gene            154..501
FT                   /gene="av2"
FT   CDS             154..501
FT                   /codon_start=1
FT                   /gene="av2"
FT                   /product="AV2"
FT                   /db_xref="GOA:A7DXF1"
FT                   /db_xref="InterPro:IPR002511"
FT                   /db_xref="UniProtKB/TrEMBL:A7DXF1"
FT                   /protein_id="ABS12061.1"
FT                   /translation="MWDPLLNPFPQTVHAFRCMLSVKYLQAVEDTYAPDTLGADLIREL
FT                   IAVIRANNYVEACSRYDHFIKRIEGTTSAQLRQPYGSPCYCPHCPCHSKTAVVEPPHVS
FT                   QAKVVPNVQKP"
FT   gene            314..1083
FT                   /gene="cp"
FT   misc_feature    314..1083
FT                   /gene="cp"
FT                   /note="nonfunctional CP due to mutation"
FT   gene            complement(1080..1484)
FT                   /gene="ac3"
FT   CDS             complement(1080..1484)
FT                   /codon_start=1
FT                   /gene="ac3"
FT                   /product="AC3"
FT                   /db_xref="GOA:A7KRP3"
FT                   /db_xref="InterPro:IPR000657"
FT                   /db_xref="UniProtKB/TrEMBL:A7KRP3"
FT                   /protein_id="ABS12062.1"
FT                   /translation="MDSRTGEYITAAQAENGVYTWEITNPLYFKIIKHDSRPLLREHDI
FT                   ITVQIQFNYNLRKALGIHKCFLTCQIWTRLQPQTLSFLRVFKTQVMKYLDNLGVICLNN
FT                   VIRAINHVLWNALHHTLYVNFNHIIKFNIY"
FT   gene            complement(1226..1630)
FT                   /gene="ac2"
FT   misc_feature    complement(1226..1630)
FT                   /gene="ac2"
FT                   /note="nonfunctional AC2 due to mutation"
FT   gene            complement(1563..2618)
FT                   /gene="ac1"
FT   CDS             complement(1563..2618)
FT                   /codon_start=1
FT                   /gene="ac1"
FT                   /product="AC1"
FT                   /db_xref="GOA:A7KRQ5"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:A7KRQ5"
FT                   /protein_id="ABS12063.1"
FT                   /translation="MRQPGQFRLNRKNFFLTYSQCPISKEEALQQLINTQIPVNKKFIR
FT                   VCKELHEDGNPHLHALVQFEGKFCITNPRFFDLQSPNSSTQYHCFITDAKSSSDVKAYI
FT                   EKDGDILDWGTFQIDGRSARGGQQSANDAYARAINTGNKEQALDVIRELAPKDYVLQFH
FT                   NLNGNLERIFMPPTQEYISPFNCSSFDQVPEEIEEWAADNVMSAAARPWRPISIVIEGD
FT                   SRTGKTMWARSLGTHNYLCGHIDLSPRVYSNDAWYNIIDDVDPHYVKHFKEFMGAQRDW
FT                   QSNTKYGKPVQIKGGIPTIFLCNPGPTSSYKEFLDEEKNIGLKNWALKNATFVTINQSI
FT                   VLRYLSKCNTG"
FT   gene            complement(2171..2461)
FT                   /gene="ac4"
FT   CDS             complement(2171..2461)
FT                   /codon_start=1
FT                   /gene="ac4"
FT                   /product="AC4"
FT                   /db_xref="InterPro:IPR002488"
FT                   /db_xref="UniProtKB/TrEMBL:A7KRQ6"
FT                   /protein_id="ABS12064.1"
FT                   /translation="METLISMLLCNSKASSASRIRDSSTYSPPIPPPNTTASSPMRSPV
FT                   QTLRHTSRKMETYLTGVPSRLMEGLQEGDSSQQTMLTQEQLTQAIRNRLLM"
XX
SQ   Sequence 2745 BP; 707 A; 573 C; 632 G; 833 T; 0 other;
     accgatggcc aaaaaaaaat ttatgccggc cccacctggc agcttttgtc tgccactaga        60
     caatcccgtc caatcagaat tcagcctgaa agcttaaata aaattggcgc ccgctttaaa       120
     tgcttggccg ctacgtttag tgcattgtcc actatgtggg atccgctttt gaacccgttt       180
     ccccagaccg tgcacgcctt tcgttgcatg ctttctgtaa agtatttaca ggccgttgaa       240
     gacacatacg ctcctgatac tttaggtgct gatttaatta gggagttaat tgcagtaatt       300
     agggcaaata attatgtcga agcgtgcagc agatatgatc atttcatcaa gcggatcgag       360
     ggtacgacgt cggctcaact tcgacagccc tatggctcgc cgtgctactg cccccattgt       420
     ccgtgccact cgaaaacagc agtggtcgag ccgccccatg tatcgcaagc caaggttgta       480
     ccgaatgtac agaagccctg atgtgcctta tggctgtgag ggtccgtgta aggtccagtc       540
     atttgaaaaa aacatgacgt tagtcatact ggcacgttgt tgtgtgtctc tgatggtacc       600
     agaggtagtg gaattacgca tagagtaggg aagcggtttc tgtgtcagtc aattacacat       660
     cataggaaga tatggatgga cgagaacatt aagtccaaga atcatactaa cacggtcatg       720
     ttctggttag ttagggatcg tcgcccagtt acaacgcctt atggctttgg tgaggcgttt       780
     aatatgtatg acaatgagcc ctctaccgca actatcaaga acgatctgcg tgatcgtttg       840
     caggtgttac acaggttttc tgccacagtt actgggggtc agtatgcgtc taaggagcag       900
     gctatgatca agcgtttctg gaggattaac aaccatgtgg tttacaacca tcaggagaag       960
     gcagcttatg aaaatcatac tgagaatgca ttagtattgt atatggcttg tactcatgct      1020
     agcaatcctg tgtatgctac gctgaaaatt agaatatatt tctatgattc tgtaatgaat      1080
     taataaatat tgaattttat tatatgattg aagtttacat acagcgtgtg gtgcaatgca      1140
     ttccatagta catgatttat tgctctaatt acattgttaa gacaaattac accaagatta      1200
     tctaaatact tcataacctg ggtcttaaag acccttaaga aactcaatgt ctgaggttgt      1260
     aagcgagtcc agatctggca agtcagaaaa catttgtgta tccccaaagc cttccgcagg      1320
     ttgtagttga actgtatctg aactgtaatg atgtcgtgtt cccgtaggag tggcctgctg      1380
     tcgtgtttga tgatcttgaa atacagggga ttggttattt cccaggtata cacgccattc      1440
     tctgcctgag ctgcagtgat gtactcccct gtgcgtgaat ccatagttgt gacagtcaat      1500
     ggagatgtat agtgaacagc cgcaacgcag atcaaccctc cgtctgcgag gtttcctctt      1560
     ggctagcctg tgttgcactt tgataggtac ctgagtacaa tggactggtt gatggtgacg      1620
     aaggtcgcat tctttagggc ccagtttttt agacctatgt ttttttcctc gtcaaggaac      1680
     tctttatagg aggatgtcgg accaggattg cagaggaaga ttgttgggat cccgccttta      1740
     atttgaacgg gcttcccgta cttagtattg gactgccaat ccctttgggc ccccatgaat      1800
     tccttgaaat gtttcacata atgaggatct acatcgtcta ttatgttata ccaggcgtca      1860
     ttgctgtaaa ccctaggact taggtcaata tgaccacata ggtaattatg tgtacctaat      1920
     gatctagccc acattgtttt accagtcctg ctgtcacctt ctatgactat acttattggt      1980
     ctccagggcc gcgcagcggc agacattaca ttgtctgcgg cccattcctc aatttcttca      2040
     gggacctgat caaacgatga acaattaaaa ggactaatgt attcttgagt tggaggcatg      2100
     aagatgcgct ccagatttcc atttaaatta tgaaattgta atacataatc cttaggagct      2160
     aactctctta ttacatcaag agcctgttcc ttattgcctg tgttaattgc tcttgcgtaa      2220
     gcatcgtttg ctgactgctg tccccctctt gcagaccttc catcaatctg gaaggtaccc      2280
     cagtcaagta tgtctccatc tttctcgatg tatgccttaa cgtctgaact ggacttcgca      2340
     tcggtgatga agcagtggta ttgggtggag gaattggggg actgtaggtc gaagaatctc      2400
     ggattcgtga tgcagaactt gccttcgaat tgcacaagag catggagatg agggtttcca      2460
     tcctcgtgta attccttaca aaccctaatg aatttcttgt tcactgggat ttgggtgttg      2520
     attaattgct gtagtgcctc ttctttagag atagggcact gtgagtaagt gaggaagaag      2580
     ttttttctat ttaatctaaa ttgcccaggc tgacgcatga tgacgtatct gttcacccga      2640
     tgggtgctcc atcaaaactc ttagtcaatg ggtgaatggg tgtataatat atagtcggga      2700
     tttttccgga ataaaaaatt tttttttggc catcgtacta atatt                      2745
//