ID EF536885; SV 1; circular; genomic DNA; STD; VRL; 2750 BP. XX AC EF536885; XX DT 16-JUL-2007 (Rel. 92, Created) DT 30-JAN-2009 (Rel. 99, Last updated, Version 2) XX DE Wheat dwarf virus - [Yunnan Kunming] isolate YNKM06-4, complete genome. XX KW . XX OS Wheat dwarf virus - [Yunnan Kunming] OC Viruses; Geminiviridae; Mastrevirus. XX RN [1] RC Publication Status: Online-Only RP 1-2750 RX DOI; 10.1186/1471-2148-8-335. RX PUBMED; 19094195. RA Wu B., Melcher U., Guo X., Wang X., Fan L., Zhou G.; RT "Assessment of codivergence of mastreviruses with their plant hosts"; RL BMC Evol. Biol. 8:335-335(2008). XX RN [2] RP 1-2750 RA Wu B., Wang X., Zhou G.; RT "Diversity of Wheat Dwarf Virus in China"; RL Unpublished. XX RN [3] RP 1-2750 RA Wu B., Wang X., Zhou G.; RT ; RL Submitted (09-MAR-2007) to the INSDC. RL Department of Pathology, Institute of Plant Protection, Chinese Academy of RL Agricultural Sciences, No. 2 Yuanmingyuan Xilu, Haidian, Beijing 100094, RL China XX DR MD5; 792235da7404729d1cf97fa1bae7323d. XX FH Key Location/Qualifiers FH FT source 1..2750 FT /organism="Wheat dwarf virus - [Yunnan Kunming]" FT /isolate="YNKM06-4" FT /mol_type="genomic DNA" FT /country="China:Yunnan Kunming" FT /db_xref="taxon:452669" FT misc_feature join(2512..2750,1..170) FT /note="long intergenic region" FT gene 171..443 FT /gene="v1" FT CDS 171..443 FT /codon_start=1 FT /gene="v1" FT /product="movement protein" FT /db_xref="GOA:A7KR37" FT /db_xref="InterPro:IPR002621" FT /db_xref="UniProtKB/TrEMBL:A7KR37" FT /protein_id="ABS10973.1" FT /translation="MEQAIAPPLPIRDYQYQTPSIPGSSDYAWRTFVFVTFGLLIAVGV FT AWLAYTLFLKDLILVCKAKKQRRTEEIGYGNTPARLNGDQQGLPR" FT gene 415..1197 FT /gene="v2" FT CDS 415..1197 FT /codon_start=1 FT /gene="v2" FT /product="coat protein" FT /db_xref="GOA:A7KR46" FT /db_xref="InterPro:IPR000143" FT /db_xref="InterPro:IPR000263" FT /db_xref="UniProtKB/TrEMBL:A7KR46" FT /protein_id="ABS10974.1" FT /translation="MVTNKDSRGKGKRKMEEGESSGRWKGAVYKRRKQAYKVVPVKPPA FT LCVFRYNWLNSDRTNVVVGNTPRVDLITCFAQGKADNNRHTNQTVLYKFNIQGTCYMSD FT ASAPFIGPVRLYHWLVYDAEPKQAMPDATDIFTMPWNLLPSTWTVQRAWSQRFVVKRKW FT TVTLVTDGRKVGSKTVDQRYNWVVGKNIVDASKFFKGLRVTTEWMNTGDGKIGDIKKGA FT LYLISSTRGGVTGDSASTAFDVVCAYTHACYFKAIGIQ" FT misc_feature 1198..1369 FT /note="short intergenic region" FT gene complement(1370..2511) FT /gene="rep" FT CDS complement(join(1370..1795,1882..2511)) FT /codon_start=1 FT /gene="rep" FT /product="replication-associated protein" FT /db_xref="GOA:A7KR47" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:A7KR47" FT /protein_id="ABS10975.1" FT /translation="MSSSSTPRFRVYSKYLFLTYPQCTLEPQYALDSLRTLLNKYEPLY FT IAAVRELHEDGSPHLHVLVQNKLRASITNPNALNLRMDTSPFSIFHPNIQAAKDCNQVR FT DYITKEVDSDVNTAEWGTFVAVSTPGRKDRDADMKQIIESSSSREEFLSMVCSRFPFEW FT SIRLKDFEYTARHLFPDPVATYTPEFPTESLICHETIESWKNEHLYSESPGRHKSIYIC FT GPTRTGKTSWARSLGTHNYYNSLVDFTTYDVNAKYNIIDDIPFKFTPNWKCFVGAQRDF FT TVNPKYGKRKVIRGGIPCIILVNPDEDWLKDMTPEQSDYMYSNAVVHYMYEGETFINYS FT FASGEDVTASQ" FT gene complement(1717..2511) FT /gene="repA" FT CDS complement(1717..2511) FT /codon_start=1 FT /gene="repA" FT /product="replication-associated protein A" FT /db_xref="GOA:A7KR48" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:A7KR48" FT /protein_id="ABS10976.1" FT /translation="MSSSSTPRFRVYSKYLFLTYPQCTLEPQYALDSLRTLLNKYEPLY FT IAAVRELHEDGSPHLHVLVQNKLRASITNPNALNLRMDTSPFSIFHPNIQAAKDCNQVR FT DYITKEVDSDVNTAEWGTFVAVSTPGRKDRDADMKQIIESSSSREEFLSMVCSRFPFEW FT SIRLKDFEYTARHLFPDPVATYTPEFPTESLICHETIESWKNEHLYSVSLESYILCTST FT PADQAQSDLEWMDDYSRSHRGGISPSTSAGQPEQERLPGQGL" XX SQ Sequence 2750 BP; 713 A; 590 C; 734 G; 713 T; 0 other; accccgcgtg gtggcccccg acgcgcactc ggcttttcgt gagtgcgcgg aggcttttgg 60 accacatctt ttctgatcac tttcgtgaaa gatggtgatt tatcacactt tcgatgtgga 120 aatgtgtgcc atgccttagc ttataaggaa gtgcgtggga gcccatctcg atggagcagg 180 caatcgcccc cccgcttcct atacgggact atcaatacca gaccccttcc attcccggtt 240 cctccgacta cgcctggcga acatttgtgt tcgttacctt cggtttgcta atagccgtag 300 gcgttgcttg gcttgcttac actctgtttc tgaaagattt aattttagtg tgtaaggcga 360 agaagcaaag gaggaccgag gaaattggtt acgggaatac accggccaga ttaaatggtg 420 accaacaagg actcccgagg taagggtaag cggaagatgg aagaaggtga atccagcgga 480 aggtggaagg gggctgtgta taagcggcgt aaacaggcgt ataaggtagt acctgtgaag 540 cccccagctc tttgcgtatt ccgctacaac tggttgaata gcgacaggac caatgttgtt 600 gtgggtaata caccccgggt cgatctgatt acctgttttg ctcagggtaa ggccgataat 660 aatcggcata caaatcagac cgtcctatac aaatttaaca tacagggtac ctgctatatg 720 tccgatgcat cagctccgtt catcggtcca gtccgcctct atcactggtt agtctatgat 780 gcagagccaa aacaggcaat gccagacgcc actgacatct ttacgatgcc ttggaatctg 840 ctgccgagta cgtggactgt gcaacgtgct tggtcgcaac gattcgtggt gaaaaggaag 900 tggaccgtga cccttgttac tgatggacgg aaggtcgggt ctaagaccgt tgaccaacgc 960 tacaactggg tagtcggcaa gaatatcgtg gacgcaagta agttcttcaa aggtttgcgt 1020 gtcacgacgg agtggatgaa cacgggtgac ggcaagatag gcgacattaa gaagggagct 1080 ctgtatctca ttagcagtac tcgtggtggt gttactggtg acagtgcctc tacggcgttt 1140 gatgttgtat gtgcctatac gcacgcgtgt tatttcaaag ccatcggcat tcagtaataa 1200 aataatattt tatttatctc atgtcattcg attacagagg ctcggctacg agcaaagaca 1260 aaccaaatta taacaaacaa caacccttac acaatgacat cggaaaagga aatacaacac 1320 cctgagatat tacatttata gaaactgtac gccgtccgcg ctaggacagt cactgcgaag 1380 cagtgacatc ttcgccggag gcgaacgagt agttgatgaa cgtctcgcct tcatacatgt 1440 agtgaacaac agcgttagag tacatgtaat ccgactgttc gggagtcata tccttgagcc 1500 aatcttcgtc tggattaact aaaatgatgc aaggtatgcc accccgtatc acttttcgct 1560 taccgtattt tggattgacc gtgaagtcac gctgagcccc gacgaagcac ttccagttgg 1620 gtgtgaactt aaatggaatg tcgtcgatga tattatactt ggcgttgacg tcatatgttg 1680 tgaagtcaac tagactgtta taataattat gtgtccctag agaccttgcc caggaagtct 1740 ttcctgttct ggttggcccg cagatgtaga tggacttatg cctccccggt gactcctgga 1800 ataatcgtcc atccactcta agtcagattg cgcttgatcc gcaggagtgg aagtacaaag 1860 gatataggat tcgaggctta cagagtatag atgttcattt ttccagcttt caatggtctc 1920 atggcatatg agtgattcgg ttggaaactc aggtgtgtaa gtggcaactg ggtcaggaaa 1980 tagatggcgt gccgtgtact cgaagtcttt gagacggata gaccattcaa acggaaaacg 2040 actgcaaacc atgctgagga attcctcgcg agaggaacta gattcaatga tttgtttcat 2100 atccgcatca cggtctttac gacctggagt tgaaacagcc acgaatgttc cccactcagc 2160 tgtgtttaca tcggagtcaa cctccttcgt gatgtaatca cgaacttggt tgcagtcttt 2220 ggcagcttgt atattaggat ggaatatgga gaatggagat gtatccatac ggaggtttaa 2280 ggcattggga ttggtgatgg aagcacgaag cttgttctgc acgagaacgt gcagatgtgg 2340 tgatccatct tcgtggagct ctctaacagc agcgatgtag aggggctcat atttgttcaa 2400 gagagtgcga agtgaatcca aggcgtactg tggctcaagg gtacattgag gatatgttag 2460 aaagaggtac ttggaataga ctcggaacct gggtgtagat gaagaggaca tggtagtgaa 2520 cagaagtccg gcaggtcctt agcgaaaaaa cggggtgtgc caaaaaactc tatgctctac 2580 cctgcgtgga ggtgtgaatt ctgcacactg caaatgaaat gtgtccaatg ttttatatag 2640 ggcaggtttt ggcgggaaaa cagggccctt gtgttcccac ggtagcgtag cgaatcgtgt 2700 gggccctgtt aggtgtgcgg tcgggggccc tccacgcggg ttataatatt 2750 //