ID EF467925; SV 1; linear; genomic RNA; STD; VRL; 2719 BP. XX AC EF467925; XX DT 01-APR-2008 (Rel. 95, Created) DT 19-JUN-2008 (Rel. 96, Last updated, Version 2) XX DE Pineapple mealybug wilt-associated virus 1 clone pF53pmw10 helicase and RNA DE dependant RNA polymerase genes, partial cds; unknown protein gene, complete DE cds; and heat shock 70-like protein gene, partial cds. XX KW . XX OS Pineapple mealybug wilt-associated virus 1 OC Viruses; Riboviria; Closteroviridae; Ampelovirus. XX RN [1] RP 1-2719 RA Gambley C.F., Steele V., Geering A.D.W., Thomas J.E.; RT "The genetic diversity of ampeloviruses in Australian pineapples and their RT association with mealybug wilt disease"; RL Australas. Plant Pathol. 37:95-105(2008). XX RN [2] RP 1-2719 RA Gambley C.F., Steele V., Geering A.D.W., Thomas J.E.; RT ; RL Submitted (03-MAR-2007) to the INSDC. RL Department of Primary Industries and Fisheries, 80 Meiers Rd, RL Indooroopilly, Brisbane, QLD 4068, Australia XX DR MD5; 3dd81e631511bbcebde5cb8ff12b2fe4. XX FH Key Location/Qualifiers FH FT source 1..2719 FT /organism="Pineapple mealybug wilt-associated virus 1" FT /host="Ananas comosus commercial hybrid" FT /isolate="A4" FT /mol_type="genomic RNA" FT /country="Australia" FT /clone="pF53pmw10" FT /db_xref="taxon:180903" FT CDS <1..348 FT /codon_start=1 FT /product="helicase" FT /note="ORF1a" FT /db_xref="GOA:B2BD54" FT /db_xref="InterPro:IPR027351" FT /db_xref="UniProtKB/TrEMBL:B2BD54" FT /protein_id="ABR68940.1" FT /translation="VDRVMTFTQNEKNELISEYMSRGIGTIQDAKTLIGTVAESQGETY FT KRVHLVAFKPTDDQVFSSMPHRLVALSRHTISLQYFCIPNKMNKGIGEDVQSIIKLEER FT VAANFVVQQCV" FT CDS <347..1909 FT /codon_start=1 FT /product="RNA dependant RNA polymerase" FT /note="RdRp; ORF1b; presumably translated by a +1 ribosomal FT frameshift" FT /db_xref="GOA:B2BD55" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:B2BD55" FT /protein_id="ABR68941.1" FT /translation="NIYLPCKDVVVPIPLGLGRPPKAHFEAIQSFLDDTLNGVGSLLFL FT NTEEQFQMTDTITNITDFSMSDNDIRFKPIKFYSNQPRIRSQMVVRRQNTLKANILAYE FT KRNAGVVKSLWHPDVTDEVMTVVDDFFGSYVDSRKLSEVLVDPVEPNIFDLADWLLSRT FT PMGKKALMMELENPVELGTNLNRFKLMVKADVKFKTDLECLSEVPPGQNIVFHDRAICA FT HFSVCFRELVNRLRTVVHKNIVLFNGLSFEEFADQLSAALNDESIDTFNCDEVDISKYD FT KSQSTFTKAVELEIYRRLGLPEKILQVWAASEFFGKAVTNKRSFSAEVYAQRRTGAANT FT WIGNTVINMMLLSQSVDVTSLNAVCFAGDDSLILKKGIPGVNFDVYDLKYEFDVKYFDC FT ASKYFCGKFLIENSGKIKVMPDPFKIFVKFGKERPETDKILLEQWQSFFDITEAYTSDA FT NISKLVSSFANKWVSSPHAYESFCTINSLRSNPEQFKRLWFDLYAYNHSRFEAQVRSDV FT KSG" FT CDS 1893..2048 FT /codon_start=1 FT /product="unknown protein" FT /note="ORF2" FT /db_xref="GOA:Q8V3A2" FT /db_xref="UniProtKB/TrEMBL:Q8V3A2" FT /protein_id="ABR68942.1" FT /translation="MLRVDNFLWAIYLITFIALCAIIIVLILLFQRVLWPNSLPPNNPV FT PHGGGY" FT CDS 2032..>2719 FT /codon_start=1 FT /product="heat shock 70-like protein" FT /note="HSP70" FT /db_xref="GOA:B2BD57" FT /db_xref="InterPro:IPR013126" FT /db_xref="InterPro:IPR018181" FT /db_xref="UniProtKB/TrEMBL:B2BD57" FT /protein_id="ABR68943.1" FT /translation="MEVGIDFGTTYSTLCFSPGKGNDGCVVESDTIFIPTVVGYRKDNT FT HAIGLGALLEKDLEVYRDIKRYFGLNKFNKDVYLDKLKPTIEVVIDDWGCSIGPVDGAR FT GKAKSVLTLASDFITGLVQLAIKMTNQQVSVSVCSVPAAYNSYQRSFIFESCKLSSINV FT QAVVNEPTAAGLSAFITTPKASVNYLLVYDFGGGTFDSSLLVVGPAYVGVLDSMGDNYL FT GGRDVDN" XX SQ Sequence 2719 BP; 805 A; 489 C; 644 G; 781 T; 0 other; gtggacaggg tcatgacctt cactcagaac gagaagaatg aactcatctc agagtacatg 60 agcaggggaa tagggactat acaagatgcg aaaactttga tcggtacggt tgctgagtcc 120 caaggtgaaa cttacaagag ggttcattta gtggcattca aaccgacaga cgatcaagta 180 ttttcttcca tgccacatag actagtagcc ctatcgagac acactatcag cttgcaatac 240 ttttgtatac ccaataagat gaacaagggc ataggtgagg atgtgcaatc aataatcaag 300 ctggaggaaa gagtcgctgc gaattttgta gtccagcagt gcgtttaaca tttatcttcc 360 gtgtaaggat gtggtcgtcc caataccgtt gggtttggga agacccccta aagctcactt 420 cgaagccatc caaagttttc tcgatgacac actgaacgga gtagggtctt tattgtttct 480 gaacacggaa gaacagtttc aaatgacgga taccatcacc aacatcacgg atttttccat 540 gagtgataac gatattcgct tcaaaccgat caagttttac tctaatcaac cgaggattag 600 atcacagatg gtggtacgca gacagaacac cctgaaagca aacattttgg cttatgaaaa 660 gaggaatgcg ggtgtagtta aatctttgtg gcatccagat gtaacagacg aagtaatgac 720 tgtggtagat gactttttcg gctcatatgt agattctcgg aaattgagtg aagtgttggt 780 ggatcctgta gaaccaaata tatttgattt agccgattgg ttgttgagca gaactccaat 840 gggaaagaaa gctttaatga tggaattgga aaatcctgtt gaactaggta caaatttgaa 900 taggtttaag ctgatggtaa aagcggatgt aaaatttaaa acagatttgg agtgtctgtc 960 ggaagtacca cctgggcaga atatagtttt ccatgacaga gcgatatgcg cacacttctc 1020 cgtgtgtttt agagaattgg tcaatagatt gcgcacagtc gtacacaaaa atattgtact 1080 tttcaacgga ttaagttttg aagaatttgc tgatcagttg agcgcggcgc ttaacgatga 1140 gtcaattgat acgttcaatt gtgacgaggt agacatatct aaatacgaca aatcccaatc 1200 cacgttcaca aaagccgtag aattggaaat ctacaggagg ttaggtttac cagaaaagat 1260 tcttcaagtc tgggcagcca gcgagttctt tggcaaagct gttactaata agaggtcatt 1320 ttctgcggag gtgtatgccc aacgtcgcac aggtgctgcg aatacgtgga taggaaacac 1380 tgtaatcaac atgatgttgc tttcacagag tgtagacgtg acatcattga atgcagtctg 1440 ttttgccggt gatgactcac tgattctcaa gaaaggtatt cctggcgtta atttcgatgt 1500 ctacgatttg aagtatgagt tcgatgtcaa atactttgat tgtgcctcca aatatttttg 1560 tggtaagttt ttaattgaaa actcgggaaa gattaaagtg atgcctgatc cttttaaaat 1620 ttttgtgaag ttcggcaaag aacgacctga aacagataag attttgctgg agcagtggca 1680 gtcctttttt gatataaccg aagcttacac ttcggacgcg aacatatcaa agttggtatc 1740 gagtttcgca aacaagtggg tatcatctcc acatgcttac gaaagcttct gtaccataaa 1800 ttctttacgc agcaacccag aacaattcaa gaggttgtgg ttcgatttgt atgcttacaa 1860 tcattccaga tttgaagcac aggtaaggtc tgatgttaag agtggataac tttctttggg 1920 caatatactt gataactttc atagcacttt gcgcgatcat catcgttttg atattgttgt 1980 ttcaaagagt gctttggccg aacagtttac caccaaacaa tccagtacct catggaggtg 2040 ggtattgatt ttggcaccac ctattccact ctgtgtttct ctccaggtaa aggaaatgat 2100 ggttgtgtgg tagagagtga cacgatattt atacctactg tcgttggtta caggaaggac 2160 aacactcacg ccataggttt gggggcactg ttggaaaaag acttagaggt ttatcgtgat 2220 ataaaaaggt atttcggact caacaagttc aacaaagatg tgtatctcga taaattgaaa 2280 cccacaatcg aggtagtgat tgacgactgg ggttgttcta taggaccagt agacggtgcg 2340 agagggaaag ccaaatcagt tctcacttta gcctctgatt ttataacggg attggtacaa 2400 ctagcgatca agatgacgaa tcaacaagta tctgtgtctg tttgttcagt accagcagct 2460 tacaattctt atcaaaggag ttttattttt gaaagttgta agttgagctc tataaatgtg 2520 caggcggtag taaacgaacc gaccgcagct ggattgagtg ctttcataac taccccgaaa 2580 gcttctgtga attatttgtt agtctacgat ttcggaggag gcacttttga tagttcctta 2640 ctcgtggttg ggcctgcgta cgtgggagta ctggattcga tgggagataa ctatctggga 2700 ggcagggacg tagataaca 2719 //