ID EF458639; SV 1; circular; genomic DNA; STD; VRL; 2753 BP. XX AC EF458639; XX DT 15-JAN-2008 (Rel. 94, Created) DT 15-JAN-2008 (Rel. 94, Last updated, Version 1) XX DE Ageratum yellow vein virus isolate NT, complete genome. XX KW . XX OS Ageratum yellow vein virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2753 RX DOI; 10.1016/j.jviromet.2007.10.002. RX PUBMED; 18031835. RA Wu C.Y., Lai Y.C., Lin N.S., Hsu Y.H., Tsai H.T., Liao J.Y., Hu C.C.; RT "A simplified method of constructing infectious clones of begomovirus RT employing limited restriction enzyme digestion of products of rolling RT circle amplification"; RL J. Virol. Methods 147(2):355-359(2008). XX RN [2] RP 1-2753 RA Wu C.-Y., Hu C.-C.; RT ; RL Submitted (27-FEB-2007) to the INSDC. RL Graduate Institute of Biotechnology, National Chung Hsing University, 250 RL Kuo-Kuang Road, Taichung, Taiwan 402, Republic of China XX DR MD5; 24ee3bbb6b200c886c29f489d32a2f6a. DR EuropePMC; PMC3723831; 23936138. XX FH Key Location/Qualifiers FH FT source 1..2753 FT /organism="Ageratum yellow vein virus" FT /isolate="NT" FT /mol_type="genomic DNA" FT /country="Taiwan" FT /db_xref="taxon:44560" FT gene 132..482 FT /gene="AV1" FT CDS 132..482 FT /codon_start=1 FT /gene="AV1" FT /product="AV1" FT /note="putative movement protein; pre-coat protein" FT /db_xref="GOA:B0EXP0" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:B0EXP0" FT /protein_id="ABR21090.1" FT /translation="MWDPLLNEFPETVHGFRCMLAVKYLQLVEQTYSPDTIGHDLIRDL FT ISVIRARNYVEASRRYCHFHSRLEGTSPSELRHPRDEPCCCPHCPRHQQKKDMDQQAHV FT SQAQTIQNVQNP" FT gene 292..1065 FT /gene="CP" FT CDS 292..1065 FT /codon_start=1 FT /gene="CP" FT /product="CP" FT /note="coat protein" FT /db_xref="GOA:B0EXP1" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:B0EXP1" FT /protein_id="ABR21091.1" FT /translation="MSKRPADIVISTPASKVRRRLNFDTPVMSRAAAPTVLVTNRRRTW FT TNRPMYRKPRLYRMYRTPDVPKGCEGPCKVQSYEQRHDISHVGKVLCVSDVTRGNGLTH FT RVGKRFCVKSVYVLGKIWMDENIKTKNHTNTVMFYLVRDRRPYGTAMDFGQVFNMYDNE FT PSTATIKNDLRDRYQVLRKFTSTVTGGQYASKEQALVKKFMKINNYVVYNHQEAAKYDN FT HTENALLLYMACTHASNPVYATLKIRIYFYDSVQN" FT gene complement(1062..1466) FT /gene="REn" FT CDS complement(1062..1466) FT /codon_start=1 FT /gene="REn" FT /product="REn" FT /note="replication enhancer" FT /db_xref="GOA:B0EXP2" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:B0EXP2" FT /protein_id="ABR21094.1" FT /translation="MDFRTGELLTATQCESGVYTWTIKNPLYFKIIKHHERPFNTNHDI FT ITIRIQFNHNLRKALGIHQCFLIFQIWTRLQPRTSHFLRVFRVQCMKYLNNLGVISINN FT VIRACDHVLWDVLENTEYVTNSHIIKFNLY" FT gene complement(1207..1614) FT /gene="TrAP" FT CDS complement(1207..1614) FT /codon_start=1 FT /gene="TrAP" FT /product="TrAP" FT /note="transcription activator" FT /db_xref="GOA:B0EXP3" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:B0EXP3" FT /protein_id="ABR21093.1" FT /translation="MRNSSPSTGHCTQVPIKVQHRIEKRRPVRRRRVDLTCGCSYYFGI FT DCANHGFSHRGITHCNSMREWRIYLDNQKSPIFQDNQAPREAIQHQPRHHNDQNTVQSQ FT PEESVGNTPVFSDLPDLDSFTTSDLAFLEGI" FT gene complement(1520..2602) FT /gene="Rep" FT CDS complement(1520..2602) FT /codon_start=1 FT /gene="Rep" FT /product="Rep" FT /note="replication-associated protein" FT /db_xref="GOA:B0EXP4" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B0EXP4" FT /protein_id="ABR21092.1" FT /translation="MAPPRPFKINAKNYFLTYPQCSLTKEETLSQIQALDTPTNKKYIK FT ICRELHEDGSPHLHVLIQFEGKYQCKNNRFFDLVSPSRSAHFHPNIQGAKSSSDVKSYI FT DKDGDTLEWGEFQIDGRSARGGQQTANDAYAQALNSGSKSEALNVIKELAPKDYVLQFH FT NLNANLDRIFAPPLEVFVCPFLSSSFDQVPEELEEWVSENVSDAAARPWRPISIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEEKNSALKEWAIKNAEFVTLNRPL FT YSGTNQSAAQNREEEASSQA" FT gene complement(2155..2445) FT /gene="AC4" FT CDS complement(2155..2445) FT /codon_start=1 FT /gene="AC4" FT /product="AC4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:A5A4R9" FT /protein_id="ABR21095.1" FT /translation="MGALISTCLSSSKGNTSARITDSSTLYPLPGQHISIRTFRELNPA FT PTSSPISTRTETPSNGVSFRSMDDLQEEDNRQPMTLTPRHLTAAVSQRLLM" XX SQ Sequence 2753 BP; 758 A; 554 C; 566 G; 875 T; 0 other; accggatggc cgcgattttt ttaaaagtgg tccctaccac gaacaaaaat cccccactca 60 gaacgctccc tcaaagttaa attattaagt ggtcccctat ttatacttat tctccaagta 120 ttattttaaa catgtgggat cctcttttga acgagtttcc tgaaactgtt cacggtttta 180 ggtgtatgct tgccgtaaaa tatcttcaat tagttgaaca gacatactct cctgatacga 240 ttggtcacga tcttatacgc gatttaattt cagtaattcg tgctcgcaat tatgtcgaag 300 cgtcccgcag atattgtcat ttccactccc gcctcgaagg tacgtcgccg tctgaacttc 360 gacacccccg tgatgagccg tgctgctgcc cccactgtcc tcgtcaccaa cagaagaagg 420 acatggacca acaggcccat gtatcgcaag cccagactat acagaatgta cagaacccct 480 gatgtgccca aaggttgtga aggcccatgt aaggtacaat cgtatgaaca gaggcacgac 540 atatcccatg ttggtaaggt attatgtgtt agtgatgtca cccgtggtaa tgggcttacc 600 catcgtgttg gtaagagatt ctgtgttaag tctgtttatg tattgggtaa aatatggatg 660 gatgaaaata ttaaaactaa gaaccatacg aacactgtga tgttttatct tgttcgtgac 720 agaaggccct atggtactgc tatggatttt ggtcaggtgt ttaacatgta tgataatgag 780 cccagtactg ctactatcaa gaatgatctt cgagaccgtt atcaagtttt aaggaaattc 840 acttcaacag tcacaggggg tcaatatgct tctaaggaac aggcgttggt gaagaaattt 900 atgaagatta ataattatgt agtgtataat catcaagaag ctgctaagta tgacaatcat 960 actgaaaatg ccttgttatt gtatatggca tgtactcatg ccagtaatcc tgtgtatgct 1020 actttgaaaa tcagaatcta tttctatgat tctgttcaga attaataaag attgaatttt 1080 attatatgag aatttgttac atattctgta ttttccaata catcccataa tacatgatca 1140 catgctctaa ttacattgtt aatactaatt acacccaaat tatttaaata tttcatacat 1200 tgaaccctaa ataccctcaa gaaatgcgag gtccgaggtt gtaaacgagt ccagatctgg 1260 aagatcagaa aacactggtg tattcccaac gctttcctca ggttgtgatt gaactgtatt 1320 ctgatcgtta tgatgtcgtg gttggtgttg aatggcctct cgtggtgctt gattatcttg 1380 aaatataggg gatttttgat tgtccaggta tatacgccac tctcgcattg agttgcagtg 1440 agtaattccc ctgtgcgaaa atccatgatt tgcacaatct atgccgaagt agtatgaaca 1500 cccgcacgtt agatcaactc tacgcctgcg aactggcctc ctcttctcta ttctgtgctg 1560 cactttgatt ggtacctgag tacaatggcc tgttgagggt gacgaattcc gcattcttta 1620 tagcccactc ttttaatgct gaattctttt cttcgtccaa gtactcttta tatgatgatg 1680 ttgggcctgg attgcaaagg aagatagttg ggattccacc tttaatttga attggtttcc 1740 cgtatttagt gttgctttgc cagtcccttt gggcccccat gaattcttta aagtgcttta 1800 gatagtgggg gtctacgtca tcaatgacgt tataccaagc atcattactg tatacctttg 1860 gactcagatc tagatgaccg cacagataat tatgtggtcc cagtgatctg gcccacattg 1920 ttttaccagt acgactatca ccttctatca caatactgat gggtctccat ggccgcgcag 1980 cggcatcact cacattttca gaaacccact cttcaagttc ttctggaact tgatcaaatg 2040 aagaggataa aaaaggacaa acaaaaacct ctaaaggagg tgcaaaaatt ctatctaaat 2100 tagcatttaa attatgaaat tgtaaaacat aatctttagg agctaactcc ttaattacat 2160 taagagcctc tgacttactg ccgctgttaa gtgcctgggc gtaagcgtca ttggctgtct 2220 gttgtcctcc tcttgcagat cgtccatcga tctgaaactc accccattcg agggtgtctc 2280 cgtccttgtc gatataggac ttgacgtcgg agctggattt agctccctga atgttcggat 2340 ggaaatgtgc tgacctggaa ggggatacaa ggtcgaagaa tctgttattc ttgcactggt 2400 atttcccttc gaactggata agcacgtgga gatgagggct cccatcttcg tgcaattctc 2460 tgcagatttt tatgtatttt ttattagttg gtgtatctag ggcttgaatt tgggaaagtg 2520 tttcttcttt agtaagagag cactgtggat aagtgaggaa ataatttttg gcatttattt 2580 taaatggtct tggaggagcc attgacttgg tcaatcggtg tctctactaa tgctctagca 2640 atcggtgtac tggagtccta tatatagtta gacatcaaat ggcaattatt gtaattttga 2700 aaagaaattc atactttaaa ttgaaatcca aaagcggcca tccgtataat att 2753 //