ID   EF442668; SV 1; linear; genomic RNA; STD; VRL; 1772 BP.
XX
AC   EF442668;
XX
DT   13-MAR-2007 (Rel. 91, Created)
DT   01-NOV-2007 (Rel. 93, Last updated, Version 3)
XX
DE   Alternanthera mild mosaic virus polyprotein gene, partial cds.
XX
KW   .
XX
OS   Alternanthera mild mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1772
RX   DOI; 10.1007/s00705-007-1036-8.
RX   PUBMED; 17668273.
RA   Almeida A.M., Fukushigue C.Y., Sartori F., Binneck E., Marin S.R.,
RA   Inoue-Nagata A.K., Chagas C.M., Souto E.R., Mituti T.;
RT   "Natural infection of Alternanthera tenella (Amaranthaceae) by a new
RT   potyvirus";
RL   Arch. Virol. 152(11):2095-2099(2007).
XX
RN   [2]
RP   1-1772
RA   Almeida A.M.R., Fukushigue C.Y., Sartori F., Binneck E., Mituti T.,
RA   Chagas C.M., Nagata A.K.I.;
RT   ;
RL   Submitted (16-FEB-2007) to the INSDC.
RL   Laboratory for Biotechnology and Bioinformatics, Embrapa Soybean, Rod.
RL   Carlos Joao Strass - Distrito de Warta, Londrina, PR 86001-970, Brazil
XX
DR   MD5; 10bd088c72d78b1a13ddd7c5873ced41.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1772
FT                   /organism="Alternanthera mild mosaic virus"
FT                   /host="Alternanthera tenella Colla"
FT                   /mol_type="genomic RNA"
FT                   /country="Brazil"
FT                   /isolation_source="infected leaves"
FT                   /db_xref="taxon:429130"
FT   CDS             <1..1462
FT                   /codon_start=2
FT                   /product="polyprotein"
FT                   /db_xref="GOA:A4GVR8"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:A4GVR8"
FT                   /protein_id="ABO21742.1"
FT                   /translation="VDNSLMVVLAMHYAFVQENIDFESIDDHCIFFVNGDDLLIAVNPN
FT                   SESLLDSMGKHFSDLGLNYDFSNRTRVKEDLWFMSHRGIKVDGKFIPKLEEERVVSILQ
FT                   WDRSNLPEHRLEAICAALIESWGYPELTHQIRRFYAWLLEQQPFEELASEGKAPYISEL
FT                   ATRRLYLNDAIDDSEAQQFLKFFAQLDEDFECDTFEVSHQSNTQNDEVCAQFVHHQSGE
FT                   GMLDAGKEDPKLGNMSKNEEQVTKPNNDKDVNTGSSGTHTVPRIKSITSTMRLPKSKGK
FT                   EALNLAHLLEDKPSQEDIANTRATQSQFDTWYAAVQNAYDIQDNEMATVMNGLMVWCVE
FT                   NGTSSTINGVWIMMDGGEQVEYPLKPVVENAKPTLRQIMAHFSDVAEAYITMRNEKEPY
FT                   MPRYGLVRDLRDMSLARYAFDFYEITSRTPVRAREAHFQMKAAALKSSQVRMFGLDGGI
FT                   STQEENTERHTTEDVSPNMHSFLGVRNN"
FT   mat_peptide     1..658
FT                   /product="NIb protein"
FT                   /note="nuclear inclusion body protein"
FT   mat_peptide     659..1459
FT                   /product="coat protein"
FT                   /note="capsid protein"
FT   3'UTR           1463..1754
FT   polyA_site      1755
XX
SQ   Sequence 1772 BP; 571 A; 306 C; 396 G; 499 T; 0 other;
     tgtagataat tctctcatgg ttgtcttagc catgcattat gcgtttgtgc aagagaatat        60
     agatttcgaa tctattgatg accattgcat attcttcgtg aatggagatg atttgttgat       120
     agcagtaaat cccaatagtg aaagtttact tgattccatg ggcaagcact tctcagatct       180
     cggtctcaat tatgattttt caaatagaac acgagttaaa gaagacttat ggttcatgtc       240
     acacaggggt ataaaagttg atggaaaatt catcccgaaa ttggaagagg agcgagttgt       300
     atcaattctg caatgggata ggtcaaatct acctgaacat agattggaag caatttgtgc       360
     agcgcttata gaatcatggg gttatccaga gctaactcat caaattcgaa ggttttatgc       420
     atggttgtta gaacaacaac catttgagga actggctagt gaaggaaaag ctccatacat       480
     ctcagaattg gctacgagga ggttatactt gaatgatgca attgatgact ctgaagcaca       540
     acagtttttg aaatttttcg ctcagcttga tgaggatttt gaatgtgaca cattcgaagt       600
     tagtcatcaa agcaacactc agaatgatga agtgtgtgct caatttgttc atcatcaatc       660
     aggagaggga atgttagatg ctggcaagga agacccaaaa cttgggaaca tgagcaagaa       720
     tgaggaacaa gtgaccaagc caaacaatga caaagatgtt aatacaggct cttctggaac       780
     acacactgtg ccaagaatca aatccataac ttccacaatg cgtctcccta aatccaaggg       840
     gaaagaggcg ctaaatttag ctcatctcct agaagataaa ccatcgcagg aggacatagc       900
     taatacaaga gcaactcaaa gtcaatttga tacatggtac gcagctgtgc aaaatgcata       960
     tgacatccag gataatgaaa tggccacagt gatgaatggt ttaatggttt ggtgtgttga      1020
     aaatggaact tcgtcgacca ttaatggcgt ttggataatg atggacggtg gagaacaggt      1080
     tgaatatcct ctaaaacctg tagtcgaaaa cgcaaagcca acgctaagac agatcatggc      1140
     acatttttca gatgtcgcgg aggcttatat aacaatgagg aacgaaaaag aaccatacat      1200
     gccacggtat ggtttagtgc gtgatttacg cgacatgagt ctagcacgct atgcttttga      1260
     tttttatgaa ataacttcac gaactcctgt aagagcccgt gaggcacact tccaaatgaa      1320
     agcagctgct ctcaaatcct cgcaagtgag gatgtttgga ctcgatggtg gcattagtac      1380
     acaagaagaa aacacagaaa ggcacacgac agaggatgtc agccccaaca tgcattcttt      1440
     tcttggggtg cgaaacaatt aagcatgtgt cttactggga tgaaagatga tttaaatata      1500
     gtatgcaata tttatttctg gtttttctgt actactttaa tttagtctaa gtttatttga      1560
     ggtagtatgg tgattctgtc atcatagtga ctcatgtaga cttttccggc tttcaatgag      1620
     gtgacacctt gattctgtca ttgtggtgac tcatggagag tttcttttag cactataatt      1680
     aaagttcgca cttattttcg tcagtgacgt tatgattccg tcatagcggt gatgttagat      1740
     cttaagtggg agacaaaaaa aaaaaaaaaa aa                                    1772
//