ID EF426853; SV 1; linear; genomic RNA; STD; VRL; 3780 BP. XX AC EF426853; XX DT 29-AUG-2008 (Rel. 97, Created) DT 11-SEP-2009 (Rel. 102, Last updated, Version 2) XX DE Arabis mosaic virus isolate Ta polyprotein P2 gene, complete cds. XX KW . XX OS Arabis mosaic virus OC Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Nepovirus. XX RN [1] RP 1-3780 RX DOI; 10.1007/s00705-008-0182-y. RX PUBMED; 18695933. RA Vigne E., Marmonier A., Fuchs M.; RT "Multiple interspecies recombination events within RNA2 of Grapevine RT fanleaf virus and Arabis mosaic virus"; RL Arch. Virol. 153(9):1771-1776(2008). XX RN [2] RP 1-3780 RA Vigne E., Marmonier A., Fuchs M.; RT ; RL Submitted (07-FEB-2007) to the INSDC. RL UMR SVQV, INRA, 28 rue de Herrlisheim, Colmar 68021, France XX DR MD5; db4aed038d777f11ad69cae9db4cd54b. XX FH Key Location/Qualifiers FH FT source 1..3780 FT /organism="Arabis mosaic virus" FT /segment="RNA2" FT /isolate="Ta" FT /mol_type="genomic RNA" FT /country="France" FT /isolation_source="Vitis vinifera cultivar Tannat" FT /db_xref="taxon:12271" FT CDS 261..3593 FT /codon_start=1 FT /product="polyprotein P2" FT /db_xref="GOA:B5KFZ7" FT /db_xref="InterPro:IPR005054" FT /db_xref="InterPro:IPR005305" FT /db_xref="InterPro:IPR005306" FT /db_xref="InterPro:IPR021081" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:B5KFZ7" FT /protein_id="ABR09918.1" FT /translation="MGKFYYSNRRLACWAAGKNPHLGGSVESWLAAITTDSSFRQTVKE FT DVQENRDEPTAIRMFSWKIGYGPIDNPEKCNWHFVLTGERPAQPSELVEAQKVVVPPVK FT VIPSPPPMPRPYFRPVGAFAPTRSGFIRATVERLSREREESRAAALFAELPLEYPQGVP FT LVVPRGFAAMRWTYHTTWRRWYDTSDERALRVHPGGPALPPPPPPPSIQKPPSFEERLR FT AALERQSCARAFALETSLGLNMAWVGMAAIPSTSICCADGRTTGGQTIAQEADPINHRV FT ASNTAPGRAAWISERRSALRRREQANSLQGLAAQTDMTFEQARNAYLGAADMIEQGLPL FT LPPLRNAYAPRGLWRGPSTRANFTLDFRLNGIPTGQNTLEILYNPVADEEMDDYRDRGM FT SAVVIDALEIAINPFGMPGNPTDLTVVATYGHERNMERAFIGSSSTFLGNGLARAIFFP FT GLQYSQEEPRRESLIRLYVASTNATVDADSILAAISVGTLRQHIGSLHNRTVASTVYAA FT QVQGTTLRATMMGNAVVVSPEGSLVVGTPEANVQIGGGSSMRMVGPLAWENVEEPGQTF FT TIRNRSRSMRVDRNADVGVALPRMSTTTRGLAGRGSVQVPKDCQAGKYLKTLDLRDMVS FT GFSGIQYEKWITAGLVMPEFKVVVRYPANAFTGITWVMSFDAYDRITSSISTVASPTYT FT LSVPHWLLHHKNGTTSCEIDYGTLCGHAMWFNATTFESPKLHFTCLTGNNKELAADWEF FT VVELYAEFEAAKTFLGKPNFIYSADAFNGSFKFLTIPPLEYDLGTTSAYKSVSLLLGQT FT LVDGAHKVYNYNNTLLSFYLGIGGVVKGRVHICSPCTYGIVLRVVSEWNGVTNNWNQLF FT KYPGCYVDENGNFEIEIRSPYHRTPLRLRDAQVASSFTSTLNFYAISGPIAPSGEIAKM FT PVVVQIDEIALPDLSVPSFPNDYFLWVDFSAFTVDVEEYVIGSRFFDITSTTSRVSLGD FT NPFAHMIACHGLHHGILDLKLMWDLEGEFGKSSGGVTITKLCGDKATGMDGASRVCALQ FT NMGCETELYVGNFAGANPNTALSLYSRWLAIKLDKARSMKMLRILCKPRGNFEFYGRTC FT FKV" FT mat_peptide 261..1037 FT /product="2A" FT /note="putative homing protein" FT mat_peptide 1038..2075 FT /product="2B" FT /note="movement protein" FT mat_peptide 2076..3590 FT /product="2C" FT /note="coat protein" XX SQ Sequence 3780 BP; 918 A; 793 C; 917 G; 1152 T; 0 other; atgaaaattt ttgtggggtt ttcatataaa cgcaactcac aattcttttt gccaagagtt 60 taagaaactc aagtttgtcc attttaagtc cgtcataagc ggaaacaggg tcaaaccgtt 120 aagagcggta ccagagcgaa gagtttaaga aactcaccat tgctttcttt ttctttctaa 180 cttacgcgtt gtatttattt agtgtttgtt ttgtctgtct tataggaagc ctattttgtt 240 ttcctttctt ttctgccctt atgggcaaat tttactattc caacaggcgc cttgcctgtt 300 gggctgctgg aaagaacccc catttagggg gttctgtcga atcatggctg gcggccatta 360 ctactgattc ctccttccgc caaactgtca aggaggacgt acaggaaaac agggatgagc 420 ctacagccat ccggatgttt tcctggaaaa ttgggtacgg gcccattgac aacccggaaa 480 agtgcaattg gcacttcgtc ctcacgggcg agaggccagc acaaccaagt gagctggtcg 540 aagctcagaa ggtggtggtg ccacctgtga aggtaattcc ttcaccgccc cctatgccaa 600 ggccttactt taggccagtt ggggcttttg caccgacccg gtccgggttt atacgggcca 660 ctgtggaaag actctcccgt gaacgggaag agtcaagagc tgcggcactc tttgccgagt 720 tgccattaga ataccctcag ggtgttcctt tggtcgttcc ccgtggcttt gctgccatgc 780 ggtggaccta tcataccacc tggaggagat ggtatgatac tagtgatgaa cgtgctttgc 840 gtgttcatcc tggtggtccg gcactgcctc ctcctcctcc ccctccctca atccaaaaac 900 caccctcttt tgaagagagg ttgcgagctg cccttgagag gcagtcttgt gctagggctt 960 ttgccctaga aacttctcta ggccttaata tggcctgggt gggaatggct gccattccca 1020 gcacttctat ctgttgtgct gatggcagga ctactggtgg gcaaacaatt gctcaagagg 1080 ctgatcctat taatcatagg gtcgcctcca atacagcccc cggtagggca gcttggattt 1140 cagagcgtcg cagtgctctg agaagaaggg aacaggcgaa tagtctgcaa ggcctagctg 1200 ctcaaacaga tatgacattt gagcaggcca ggaatgcata tcttggtgct gctgatatga 1260 ttgagcaagg cctaccgtta ctacctcctt tgaggaatgc ttatgcgcct cggggtttat 1320 ggaggggacc ttccaccaga gccaatttca ctcttgattt caggcttaat ggcattccca 1380 ctgggcaaaa taccttagaa attttgtata acccagtggc agatgaggaa atggatgact 1440 accgtgacag gggtatgtcg gcagttgtga ttgatgcatt ggaaattgct attaatcctt 1500 ttggaatgcc aggtaatcca actgatctta ctgtcgttgc aacatatggg cacgagcgca 1560 atatggaacg cgctttcatt ggttcttcgt ctacttttct tggaaatggg ctggcacgag 1620 ctatcttctt tcctggttta caatatagtc aagaggaacc acggcgtgaa tcccttatcc 1680 gtctttatgt tgcttcaact aatgcaacgg ttgatgctga ttctatattg gcagccatta 1740 gtgttggcac tttgcgccag cacattggtt ctcttcataa tagaacagtg gcaagtaccg 1800 tctatgctgc gcaagtgcaa ggcactactt taagggcaac tatgatgggc aatgccgtcg 1860 tagtttcccc tgaaggaagt ctcgtggtag gaactcctga agcaaatgtc caaataggag 1920 gtggttccag tatgcgcatg gttggcccat tggcatggga gaatgtcgag gaaccagggc 1980 aaaccttcac cataagaaac cgctctcggt ctatgcgtgt agaccgtaat gctgatgttg 2040 gagttgctct tcctagaatg agcactacaa cgcggggtct tgctggtagg ggttctgttc 2100 aagtccccaa ggattgccaa gcgggaaaat atttgaaaac tcttgatttg agagacatgg 2160 ttagtgggtt ttcaggtatt caatatgaaa agtggattac tgctggactt gttatgccag 2220 aatttaaagt agtggttcgc tatccagcca atgcctttac gggtattacg tgggttatga 2280 gttttgacgc ttatgatcgt ataactagca gtatttctac tgttgctagt cctacgtata 2340 ctctttctgt cccccattgg ctgttgcatc ataaaaatgg gacaacctca tgtgaaatag 2400 attatggaac tttgtgcggt catgccatgt ggtttaatgc cacgactttt gagagtccca 2460 aacttcattt cacatgtctc actgggaaca ataaggaact cgctgcagac tgggaatttg 2520 tggttgagtt atatgctgag tttgaagcag cgaaaacttt tcttggaaag cccaatttta 2580 tttacagcgc tgatgctttt aatgggtctt tcaagtttct aactatccca cctctggaat 2640 atgacctagg tactacaagt gcctacaaga gtgtgtccct ccttttaggc caaactcttg 2700 tagatggagc tcataaggta tataactata ataatactct tttgagtttc tatcttggca 2760 ttggcggtgt tgttaagggc agagttcaca tatgtagccc ttgtacttat ggcatagtcc 2820 tgagagttgt tagtgaatgg aatggggtca ctaataactg gaaccaactg tttaaatacc 2880 ccgggtgcta tgtagatgag aatgggaatt ttgaaattga gatacgttct ccctatcatc 2940 gaactccact gcgtttgaga gatgcacaag tggcgagctc ttttacgagc acgctaaact 3000 tctatgcaat ttctgggcca attgccccaa gtggagaaat agccaaaatg ccagtggttg 3060 tgcaaattga tgagatagca cttcccgatc tttccgttcc ctcttttcct aatgattatt 3120 tcctatgggt agatttttct gctttcactg ttgatgttga agaatatgtg atagggtcga 3180 ggttttttga tattacctct accaccagca gagtctccct tggggataat ccgtttgccc 3240 acatgatagc ttgccatgga ctccatcatg gaattcttga tcttaagtta atgtgggatt 3300 tggaaggaga gtttggaaag agttctggtg gcgttactat cacaaaattg tgtggtgaca 3360 aagctactgg catggatgga gcatcccgtg tttgtgcact acagaatatg gggtgtgaaa 3420 ctgaattgta cgtaggtaat tttgctggtg ccaatccaaa tacagcattg tccttgtaca 3480 gtcgatggct tgcaataaag ttagataaag ccagaagcat gaaaatgctt aggattttat 3540 gcaagccgag aggaaacttt gaattctatg gtcgtacatg tttcaaggtt taattcgtct 3600 tgggtatctg acgttaaaag acccaatatg tgttatatct gcatttagtt tgtttactgc 3660 tttagtgtgt ttttcttcat gcttttagtg gcgacagtgt attgtttgtc ctttggatac 3720 acttgccttg ttggacacaa aaagattttc tttatctttt ttctgctttt gtagttttat 3780 //