ID   EF423670; SV 1; linear; genomic DNA; STD; VRL; 834 BP.
XX
AC   EF423670;
XX
DT   23-JUL-2007 (Rel. 92, Created)
DT   23-JUL-2007 (Rel. 92, Last updated, Version 1)
XX
DE   Tomato yellow leaf curl virus isolate recombinant Ty-1St-C.6 15dpt type V
DE   REn and TrAP genes, complete cds; and nonfunctional Rep gene, partial
DE   sequence.
XX
KW   .
XX
OS   Tomato yellow leaf curl virus
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-834
RX   DOI; 10.1016/j.virol.2007.03.045.
RX   PUBMED; 17467025.
RA   Garcia-Andres S., Tomas D.M., Sanchez-Campos S., Navas-Castillo J.,
RA   Moriones E.;
RT   "Frequent occurrence of recombinants in mixed infections of tomato yellow
RT   leaf curl disease-associated begomoviruses";
RL   Virology 365(1):210-219(2007).
XX
RN   [2]
RP   1-834
RA   Garcia-Andres S., Tomas D.M., Sanchez-Campos S., Navas-Castillo J.,
RA   Moriones E.;
RT   ;
RL   Submitted (02-FEB-2007) to the INSDC.
RL   Fruticultura Subtropical y Fitopatologia, Estacion Experimental La Mayora,
RL   CSIC, Algarrobo-Costa, Malaga 29750, Spain
XX
DR   MD5; 60072da8ce68feaf9911a1ba19c3f6f2.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..834
FT                   /organism="Tomato yellow leaf curl virus"
FT                   /isolate="recombinant Ty-1St-C.6 15dpt type V"
FT                   /mol_type="genomic DNA"
FT                   /country="Spain:Malaga"
FT                   /note="TYLCSV/TYLCV recombinant"
FT                   /db_xref="taxon:10832"
FT   CDS             complement(61..465)
FT                   /codon_start=1
FT                   /product="REn"
FT                   /db_xref="GOA:A7KI32"
FT                   /db_xref="InterPro:IPR000657"
FT                   /db_xref="UniProtKB/TrEMBL:A7KI32"
FT                   /protein_id="ABS29943.1"
FT                   /translation="MDSRTGELITAPQAENGVFIWEINNPLYFKITEHSQRPFLMNHDI
FT                   ISIQIRFNHNIRKVLGIHKCFLNFRIWTTLQSPTGHFLRVFRYQVYKYLNNIGVISLNN
FT                   VIRAVDYVLFDVFENTIDVIEQHEIKYNLY"
FT   CDS             complement(206..613)
FT                   /codon_start=1
FT                   /product="TrAP"
FT                   /db_xref="GOA:A7KI33"
FT                   /db_xref="InterPro:IPR000942"
FT                   /db_xref="UniProtKB/TrEMBL:A7KI33"
FT                   /protein_id="ABS29944.1"
FT                   /translation="MQPSSPSTSHCSQVSIKVQHKIAKKKPIRRKRIDLDCGCSYYQHL
FT                   NCNNHGFTHRGTHHCSSGREWRFYLGDKQSPLFQDNRTQPEAISNEPRHHFHSDKIQPQ
FT                   HQEGIGDSQMFSQLPHLDDLTVSDWSFFKSL"
FT   misc_feature    complement(522..>834)
FT                   /note="nonfunctional Rep due to mutation"
XX
SQ   Sequence 834 BP; 216 A; 151 C; 180 G; 287 T; 0 other;
     ttctaaccca gtgtatgcta cgttgaaaat acgtatctat ttttatgatg ctgtaacaaa        60
     ttaataaaga ttgtatttta tttcatgttg ttcaattaca tctattgtgt tctcaaatac       120
     atcgaataag acataatcaa ctgctctaat aacattgttt aatgaaatta cacctatatt       180
     attcaaatac ttatacactt gatacctaaa gactcttaaa aaatgaccag tcggagactg       240
     taaggtcgtc cagatgcgga agttgagaaa acatttgtga atccccaata ccttcctgat       300
     gttgtggttg aatcttatct gaatggaaat gatgtcgtgg ttcattagaa atggcctctg       360
     gctgtgttct gttatcttga aatagagggg attgtttatc tcccagataa aaacgccatt       420
     ctctgcctga ggagcagtga tgagttcccc tgtgcgtgaa tccatgattg ttgcagttga       480
     ggtgttggta gtatgagcag ccacagtcta ggtctatacg cttacgcctt attggtttct       540
     tcttggctat cttgtgttgg accttgattg atacttgcga acagtggctc gtagagggtg       600
     acgaaggttg cattcttgag agcccatttt tcaaggatat gttttttctt cgtctagata       660
     ttccctatat gaggaggtag gtcctggatt gcagaggaag atagtgggaa ttcccccttt       720
     aatttgatgg gcttccgtac tttgtgttgc tttgccagtc cctctgggcc cccatgaatt       780
     ctttgaagtg ctttaaataa tgcgggtcta cgtcatcaat gacgttgtac catg             834
//