ID EF205130; SV 1; linear; genomic RNA; STD; VRL; 6657 BP. XX AC EF205130; XX DT 16-JAN-2007 (Rel. 90, Created) DT 16-JAN-2007 (Rel. 90, Last updated, Version 1) XX DE Tomato white ringspot virus isolate T818 segment RNA1 polyprotein gene, DE partial cds. XX KW . XX OS Tomato white ringspot virus OC Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Nepovirus; OC unclassified Nepovirus. XX RN [1] RP 1-6657 RA Ciuffo M., Margaria P., Lenzi R., Turina M.; RT "Characterization of a new Nepovirus species isolated from tomato in RT Italy"; RL Unpublished. XX RN [2] RP 1-6657 RA Ciuffo M., Margaria P., Turina M.; RT ; RL Submitted (04-JAN-2007) to the INSDC. RL IVV, CNR, Strada delle Cacce 73, Torino, TO 10135, Italy XX DR MD5; d9d0cba86b884036a37817e5778f8419. XX FH Key Location/Qualifiers FH FT source 1..6657 FT /organism="Tomato white ringspot virus" FT /segment="RNA1" FT /host="Solanum lycopersicum" FT /isolate="T818" FT /mol_type="genomic RNA" FT /country="Italy" FT /db_xref="taxon:419587" FT CDS <1..5752 FT /codon_start=2 FT /product="polyprotein" FT /note="ORF-1" FT /db_xref="GOA:A2ID54" FT /db_xref="InterPro:IPR000605" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR004004" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR014759" FT /db_xref="UniProtKB/TrEMBL:A2ID54" FT /protein_id="ABM65095.1" FT /translation="LPPKVVTAAAPVKAEFNFPAEHFLPGELRYNSKPFPKDEAVSIPA FT PVADAPIWERTHYFGLEAATPAGIAYKACMDAAHRIPLPERVRDFLITVAPCSLKWGKY FT ASLLLRLYEHIPFGSYFEATKNVLTYTFDYEGVMVTLQEEVDCLDEFARTSIGAQGMMS FT WINESASSLGHKFAKGIINAVTESADKMISKMQELARDAFTKIKQAFMELVSPHLARLQ FT HISAEIEKYWVCVCRWATKMAESMSVQLQAFRDSMWWASAMLLSAGIVAIIEKILVKME FT IITYPGVLVGCFLSSILAYMGYTALDDSGAIKMLMRTIKQSIISLYVQKETSPAEVRAM FT VHGDADMIAHSVGEVPLRFLNAIGSGLIAAPLGTLQYAGKYGAALDQIRRGKDAMKEFT FT GWTIECIGDAWDMYSGRRDTFFHEIARLTKVDIVKWIRDSQNIILQSQTTANTDPLLLE FT MCTRALSKGWKLQQSLAKGKRTTNVDYGFIVGKYVTELQSIRAKCAMAGKMEGRRKEPF FT WVYIYGESHCGKSLLMEPIIDALTDELGLPAGDTYAKNGRDNFWPGYTRQAVVTVDDLS FT ATIAQPSLESEFMQLVGSKPYALNMAAVEEKGMLFSSRVIVTSSNFFDAPTKAEIQDRV FT AYQNRRNVVVRCRRKPDSEFDPTNPHASCEAVFVDRKTEQQIGEWRNCEALIDEIKIKA FT AAHDEKEEKLQAHYLGSHRRVHPIHNDIQDFLRAGIVMTKHLADTNYDTYRENWLDANL FT AVDGKLYKVSLKNVCDELLELPPDGFEEACLARIPTLSTAMADEGVSEFVQTVIEGMIE FT GPSFVESVDKMSAETPADHREFFSRLPLGERVYFRLLQKRFEQLKADKDFNFQIDMKMR FT VLKSLKSSYDKVIENGGRIFLVCCAFIMIYFAYSTFFSIFNAFVGGSSAGMAGALITQL FT DAHSVYSSGASVQSYRSRNLPTTYRQRMMAHSQDDSKKLADEDAKFKTDLLVRLTIPGG FT RVICAVRFYGRSLLMTKHQAMAMRKGDRVMCNYTARGVQSGKIEFLYDPSRLTEFPDTE FT LVQYADNVLSPLPNPAHNAFVFDHAKLKGTLQLFGAVIKLRRHCGDHTIGLENVDGDVP FT TLHKWDAIGNVTTTRQTISTFVDGAPYYNDIPKYLHSNSPTTVEDCGAIMTALVDGEYR FT VVGIHVAGGVTPTGQYTSMACLIPYVPHFECHSRMPALEERVGIDTLGCTKIGFVSNPV FT ERPYYATKTQFVEVPEMVKIPYHDVKIPSILAKGDARLRGTEHEAYDPLKNGMSKYEEP FT MSLVDEKLLREVAQEIVETWHDCEDGTFGDADDDVVINGIDGEDFFDALVMSTSEGYPY FT IKERNIGEKGKARYFEPTGDGCRKQLIQGTMVAQDIEYLKETVHEIVPEIICVETPKDE FT RLPARKVTGKPKTRLFSVLPLSYNFMLRKKFLYFVAFLQKNRGRLPCQVGINAYSREWQ FT TLYNRLAERSENALNCDYSSFDGLMTGQMLSCIGDMINTMYGDSQKSKNGRKNLLMAIC FT NRKSLCGADAYEVRAGIPSGCALTVLLNSIFNEILVRMVYKTVVPGVPRNHFNEYVTLL FT VYGDDNLIAVDPSILEVFNGDVIKKTMAKWRVTITDGSDKLSPTLTEKPLLSLDFLKRG FT FKLADNGQVYAPLDKTAIYSSLHWVAGRGQDVMSALKDNARSALIEMWAHQDKAEFVEL FT RSFYVSKIPSWSDLPTWDQARCFHEAQQHGAMPYRPQASMELLVDMHTDKKMMANHGEQ FT DHLIYVQPRIAVSGPKWIIESCDKQFVVSTLPLSRAEKFSGIHIPVECGDGLGRMPSQD FT WVRRFRRIRHVQIRVIYDAYAAGKTIIFKDVAPYIAGWTAAISFACAQQYSYRDMLNRY FT NNVCTPNSSGIEQYFAKDMAMKCKLPFHPPGEKCTCDVLSSR" XX SQ Sequence 6657 BP; 1828 A; 1198 C; 1655 G; 1976 T; 0 other; attaccacct aaggtggtta ccgctgcagc cccggttaag gctgaattca acttccccgc 60 agaacatttt ctgcctggtg agttgagata caacagcaag ccctttccaa aggatgaggc 120 tgtttctatt ccagcaccag ttgctgatgc tcccatctgg gaaagaaccc attattttgg 180 gttggaagct gccacaccag ctggaattgc ctataaggca tgcatggatg cggcacacag 240 aatccctcta cctgagaggg ttcgtgattt cctaatcacg gttgcccctt gttctttgaa 300 gtggggtaag tatgcatctc ttttgttgcg tctttatgaa catattccct ttgggagtta 360 ttttgaagca acaaagaatg tattaactta cacctttgat tatgaagggg ttatggttac 420 actccaagag gaagtggatt gtctggatga atttgctaga acttccattg gagcacaggg 480 aatgatgtcg tggataaatg agtctgcttc atcacttgga cataagtttg ctaagggtat 540 tattaatgcc gtgacagagt ctgcagataa gatgatatct aaaatgcaag aactggctcg 600 cgatgcattt acgaaaatca agcaagcttt catggaattg gtttcgcctc acttggcgcg 660 tctacaacac atcagtgctg aaattgaaaa atactgggtg tgcgtttgta gatgggccac 720 aaagatggct gaatcaatgt cggttcaact ccaagcattt agagattcga tgtggtgggc 780 tagtgctatg ctgttatcag ctggtattgt ggccatcatt gagaaaattt tagtgaagat 840 ggagattatc acttatccag gagtccttgt ggggtgtttt ctgtcgagta tattggctta 900 tatgggctat actgctctag acgatagtgg tgctattaag atgttaatga gaacaatcaa 960 acagagcatc atctcccttt atgtccaaaa agaaacctcc ccagctgaag ttcgggccat 1020 ggttcatggt gatgcagata tgatagctca ctcagttggt gaagtgccat tgcgtttctt 1080 aaatgcaatt ggcagtggtt tgattgctgc tcccctaggc acgttgcaat atgctgggaa 1140 atacggtgcc gcgcttgatc aaattaggcg tggtaaggat gctatgaaag agttcacggg 1200 atggactatt gaatgcatag gagatgcatg ggatatgtat agtggtagaa gagacacgtt 1260 cttccatgag attgctcgat tgacgaaagt cgatatagtg aagtggattc gtgattcaca 1320 gaacataatc ttgcagtctc aaacaacagc caatacagat cctttgcttc tcgaaatgtg 1380 cacccgggct ctttcaaagg ggtggaagtt gcaacaatcc ctcgccaagg gcaagcgtac 1440 aactaatgtg gattacggat tcatagttgg gaagtacgtt actgagttac agagcatacg 1500 tgctaaatgt gctatggcag ggaagatgga aggaaggcgc aaggaaccat tttgggttta 1560 catttatggt gagtcccact gtgggaaatc attgttaatg gagccgatta tagatgcgct 1620 aactgatgag ctaggattgc cagctggtga tacctatgca aagaatggcc gtgacaattt 1680 ttggccaggt tacacaagac aagccgttgt gacggttgat gatctatcag ctacaatagc 1740 acaaccaagt cttgaatcag agttcatgca actggtgggc tcaaagcctt atgcacttaa 1800 tatggctgct gttgaggaaa aaggaatgtt gttttcatca cgtgtgatag tgacatcttc 1860 caatttcttt gatgcaccaa ccaaggccga gattcaagac agggttgcgt accaaaaccg 1920 tcgcaatgtg gtggttaggt gtcgtaggaa gccagacagt gaatttgacc caaccaaccc 1980 acacgcttct tgcgaggctg tttttgtgga ccggaagaca gagcagcaaa ttggtgaatg 2040 gcgcaattgt gaggcgctca tcgatgaaat taagattaag gcagctgctc atgatgagaa 2100 agaggaaaag cttcaggctc actatttggg atcgcaccgc agagttcatc caatacacaa 2160 tgatattcaa gatttcttgc gagctggtat tgtgatgaca aagcatttag cagatacaaa 2220 ttacgataca tatcgtgaaa attggctaga tgcaaatctt gcggtggatg gtaaactcta 2280 caaagtgagc ttgaagaatg tttgtgatga gttattggaa ctacctccgg atggattcga 2340 ggaagcttgt ttggcacgta ttccaacgct gtcaacagct atggctgatg agggagtttc 2400 tgaatttgta cagactgtta ttgagggtat gatagaaggt ccctcttttg tagaatctgt 2460 agataagatg tctgccgaaa caccagcgga tcacagggag ttcttctcgc gcctacctct 2520 tggtgagcgt gtgtacttcc gtctcttgca aaagagattt gagcaattga aagctgataa 2580 agatttcaat tttcaaattg atatgaagat gcgtgttttg aaatcactaa agtcatctta 2640 tgataaggtg attgaaaatg gtggacgaat tttcttagtt tgttgtgctt ttattatgat 2700 ttattttgca tatagcactt tcttttctat ttttaatgct tttgtgggtg gctccagtgc 2760 tggtatggcc ggagccctta taactcagct tgatgcacat tctgtttata gttctggtgc 2820 ttcggttcag agttatcgat cacgcaattt gccaacaacg tacaggcagc gaatgatggc 2880 gcattcccaa gatgattcca agaaattggc agatgaggat gcgaaattta agactgattt 2940 gttggtgcgt ttaactattc ctggtggtcg tgtcatttgt gctgtgcgct tttatgggcg 3000 ttcattactc atgacgaaac atcaggctat ggcaatgcgc aagggtgatc gtgtcatgtg 3060 taattatact gctaggggtg tacagagtgg gaagatcgaa tttttatatg atccttcccg 3120 tctcactgag tttcctgata ctgagcttgt acaatatgct gataatgtgc tcagtccttt 3180 acccaatcca gctcacaatg cctttgtttt tgatcatgct aaacttaagg gaacgctcca 3240 actttttgga gctgttatta aattgagaag gcattgtggt gatcatacga ttggcttgga 3300 gaatgtggat ggggatgtgc caacattgca caagtgggat gctattggta atgttactac 3360 aactaggcaa actatttcta cttttgtaga tggggcgcct tattataatg acattccaaa 3420 gtatctccac tctaactccc caaccacagt tgaagactgt ggagccataa tgacagccct 3480 ggttgatggt gaatacaggg ttgtgggcat ccacgttgca ggtggtgtga ctccaacagg 3540 gcaatatacc tcaatggcat gtttgatccc gtacgtacca cattttgagt gccattcacg 3600 aatgcctgca ttggaagaaa gagttggtat tgatacactt gggtgtacga agattggttt 3660 tgtgtccaat cccgttgaga gaccttatta tgcgaccaaa acacagttcg ttgaagttcc 3720 agaaatggtt aaaataccat accatgacgt taagatacct agtattttgg cgaaagggga 3780 tgcccgtctg aggggtacgg aacacgaggc atatgatcca ttgaaaaatg gtatgtccaa 3840 gtatgaagag ccaatgagtt tagttgatga gaaacttctg cgtgaagttg cccaagaaat 3900 cgtcgaaact tggcacgatt gcgaagatgg tacctttggt gatgccgatg atgatgttgt 3960 tattaatggt attgatggtg aggatttttt cgatgcgttg gttatgtcaa cgtccgaagg 4020 atatccttac attaaggaac gcaacatcgg agagaaaggc aaggctagat actttgagcc 4080 aactggagat gggtgtagaa aacaattaat acagggaaca atggttgcgc aggatattga 4140 atatctgaag gaaactgtgc atgaaattgt tcctgaaatt atttgtgttg aaacacctaa 4200 agatgagcgc ttgccggctc gtaaggttac tggtaaaccc aaaaccagat tgttctctgt 4260 tctacccctg agttacaatt tcatgttgcg caagaagttt ttatactttg tagcgtttct 4320 tcaaaagaat cggggtaggt tgccatgtca ggtggggata aatgcatatt cccgtgagtg 4380 gcaaacacta tacaatcgtt tggcagaaag aagcgagaac gctttgaact gtgattattc 4440 atcttttgat ggtttaatga cgggacaaat gttatcttgt attggagata tgattaatac 4500 gatgtatggt gattcccaaa aatccaaaaa tggtcggaaa aatcttttga tggccatatg 4560 caatcgcaag tcactttgtg gagctgatgc ttatgaggtg agagctggga taccttcagg 4620 ctgtgcttta acggtgttgt tgaactccat ttttaatgaa attttggtta gaatggtgta 4680 caaaacagtt gtgcctgggg ttccgcgtaa tcatttcaat gagtatgtca ctctattggt 4740 ttatggggat gataatttga tcgctgttga cccttctatc ttagaagtgt ttaatggtga 4800 tgtgataaag aaaaccatgg ccaaatggag ggtcactatt actgatggta gtgacaaatt 4860 atcgccaact cttactgaaa agcctctctt atctcttgat tttttgaaga gaggttttaa 4920 gttggcagat aatggacagg tgtatgctcc attggataaa acggcaattt actcctcatt 4980 gcactgggta gcgggtcgcg gtcaggatgt gatgtctgca ttaaaagata atgcacgtag 5040 tgcattgatt gaaatgtggg cacaccaaga taaggcagag ttcgtggaat tgcgctcatt 5100 ctatgtgagt aaaataccat cctggtctga tctcccaact tgggatcagg ctaggtgttt 5160 tcatgaagcg caacaacatg gagctatgcc ctatagaccg caggcatcaa tggaattgct 5220 ggttgacatg cataccgaca agaaaatgat ggcaaaccat ggtgaacagg atcatttgat 5280 atatgttcaa ccacgtattg ctgtttcagg acccaaatgg attatagaga gttgtgataa 5340 acagtttgtt gtctcaactc taccattgtc gcgtgcagag aaattttcag gaattcacat 5400 acctgtggaa tgtggtgatg gtttagggcg aatgccgtca caagattggg tgaggagatt 5460 tagacgtatc cgtcatgtgc aaattcgtgt tatttatgat gcatatgctg cgggtaagac 5520 tataatcttc aaagatgttg caccatacat agctggttgg actgctgcta tctcttttgc 5580 ctgtgctcaa cagtacagtt atagggatat gttgaatagg tataataatg tttgtacccc 5640 aaattcatcg ggtattgagc aatattttgc caaagatatg gctatgaagt gcaagttacc 5700 attccacccg cctggtgaaa agtgtacttg tgatgttctt tcatcccgtt gagagtaacg 5760 gggtctggtt gtcaacaagc cagtctgcta aatttgttga gaacctctga tcttaattga 5820 ttggagttat gctttatttt gtgttttgtt ttacacaaca tcaaaactca cacacttgtg 5880 tgataccact ttggttccgt gaaatcggta attgatggtt gtagagtctc ccatttggga 5940 tagaggacta tggttcccct cgataaaaac gaactacgta ttgagtaata ggcttgctcc 6000 agggtggtat gccgtcccct ggctcaatat gaagatttgg tgctttttgt cagatatgag 6060 cacccccgct tcacacgggg ttaagtcagt gtagtaaagg tgaaatattc cctggggcac 6120 tggttaacgt gaacgtttgg cgcgaaaagt ctaaaggtat gtgtacaaca ccttctgtac 6180 tcaagatcga agtttggcaa ctgagattgg atgggggccc gagatgaatg cggggaggta 6240 ataaacctca ggaaggcaca catgctgatt tccaaattta tgtaaatttg gcgttggaag 6300 tgaaggttcg acgatataga actttcaaga gctaggctga tgtcaatttg acacaaaccc 6360 aatagatcat ggaccctgga attgataccc gggagtaaat ccacaccaga tggagtgagt 6420 tttaatgatc ccctcacacg tggtgggaga atctattggc atttgtgggg ttggcaaaac 6480 cctagtaagg acgttgtttc tgacaggttt gttggtccta ttgagttttc taaacctgtt 6540 ttatcgtatg ataagctcct ctgactttca ctagttggag ttctgtgagc attgggctga 6600 tggacggact ttaattagtt cttactgaag cttttagtgc aaaaaaaaaa aaaaaaa 6657 //