ID   EF155995; SV 1; linear; genomic RNA; STD; VRL; 1814 BP.
XX
AC   EF155995;
XX
DT   05-OCT-2010 (Rel. 106, Created)
DT   19-NOV-2010 (Rel. 106, Last updated, Version 2)
XX
DE   Sweet potato feathery mottle virus isolate 43RUK polyprotein gene, partial
DE   cds.
XX
KW   .
XX
OS   Sweet potato feathery mottle virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1814
RX   DOI; 10.1111/j.1365-294X.2010.04682.x.
RX   PUBMED; 20609081.
RA   Tugume A.K., Cuellar W.J., Mukasa S.B., Valkonen J.P.;
RT   "Molecular genetic analysis of virus isolates from wild and cultivated
RT   plants demonstrates that East Africa is a hotspot for the evolution and
RT   diversification of sweet potato feathery mottle virus";
RL   Mol. Ecol. 19(15):3139-3156(2010).
XX
RN   [2]
RP   1-1814
RA   Tugume A.K., Cuellar W.J., Mukasa S.B., Valkonen J.P.T.;
RT   ;
RL   Submitted (30-NOV-2006) to the INSDC.
RL   Department of Applied Biology, University of Helsinki, P.O. Box 27
RL   (Latokartanonkaari 7), Helsinki FIN-00014, Finland
XX
DR   MD5; 5312dc75adbfff04dc7f55e62a9f33dd.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1814
FT                   /organism="Sweet potato feathery mottle virus"
FT                   /host="Ipomoea tenuirostris"
FT                   /isolate="43RUK"
FT                   /mol_type="genomic RNA"
FT                   /country="Uganda:Rukungiri"
FT                   /isolation_source="leaf"
FT                   /db_xref="taxon:12844"
FT   CDS             <1..1593
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:E1U288"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:E1U288"
FT                   /protein_id="ABO92957.1"
FT                   /translation="GNNSGQPSTVVDNTLMVVLAVHYTLLKLGIQESEFDKCCVFFANG
FT                   DDLLLAMRPDTAHLLDKFGECFSELGLNYDFSSRTNKKEDLWFMSHCGVKRDGIFIPKL
FT                   EPERIVSILEWDRSHEPIHRLEAICAAMVESWGYDELLHHIRKFYAWVLDQAPYNELAR
FT                   NGKAPYIAETALKALYTGVQPNASELSAYTRVLKEMYDDSMLQENELEVYHQSNESTEF
FT                   KDAGANPPAPKPKDVPPPPTITEITDPEDPKQAALKAARAKQPAVIPESYGRDTSKERE
FT                   SIVGTSSKSVRDKDVNVGTVGTFVVPRVKMNANKKRQPMINGRAIINFQHLSTYEPEQF
FT                   EVANTRSTQEQFQAWYEGVKGDYGVDDTGMGILLNGLMVWCIENGTSPNINGVWTMMDG
FT                   DEQVTYPIKPLLDHAVPTFRQIMTHFSDVAEAYIEMRNRTKAYMPRYGLQRNLTDMSLA
FT                   RYAFDFYELHSTTPARAKEAHLQMKAAALKNARNRLFGLDGNVSTQEEDTERHTTTDVT
FT                   RNIHNLLGMRGVQ"
FT   mat_peptide     <1..645
FT                   /product="nuclear inclusion body protein"
FT                   /note="NIb"
FT   mat_peptide     646..1590
FT                   /product="coat protein"
FT                   /note="CP"
FT   3'UTR           1594..1814
XX
SQ   Sequence 1814 BP; 572 A; 330 C; 426 G; 486 T; 0 other;
     ggtaataata gtggtcagcc atctactgtg gttgataata cacttatggt tgtgttagca        60
     gttcactaca cactgctgaa actaggaatc caagaaagcg agtttgataa atgttgtgtc       120
     tttttcgcaa atggtgatga tttattgttg gcaatgaggc cagatacagc ccatttattg       180
     gataagtttg gtgaatgttt ttctgaatta gggctcaatt atgacttttc atcacgaaca       240
     aataagaaag aagatctatg gtttatgtca cactgtggcg tgaaacgtga tggaatattt       300
     attccgaagc tggagcctga aaggattgtt tcaattcttg aatgggatcg ttcacacgag       360
     ccaattcatc gactggaagc aatatgtgcc gcgatggtgg aatcatgggg ttatgatgaa       420
     cttcttcatc atattaggaa attctatgca tgggttttgg accaagcccc atataacgaa       480
     ctagcacgaa atggaaaagc accatacata gctgaaactg cactcaaagc actctatact       540
     ggtgttcaac ctaatgcttc tgaattgagt gcgtatacga gagtgctcaa agaaatgtat       600
     gatgacagta tgcttcaaga gaatgaatta gaagtatatc atcaatctaa tgagagcact       660
     gaatttaaag atgcaggagc aaaccctcca gcccctaagc ctaaggacgt ccctccacca       720
     cccacaataa ctgaaatcac tgatccagag gacccgaagc aggcagcttt gaaagctgca       780
     cgagcaaagc aacccgcagt cattccagaa tcatatggac gagacacgag caaagaaagg       840
     gagtcaatag tggggacatc atcaaagagt gtgagggata aagatgtgaa tgttggcact       900
     gttggtacat ttgttgtgcc acgtgtcaaa atgaatgcaa acaagaaaag gcaaccaatg       960
     attaatggaa gggccattat aaatttccag cacttgtcaa catatgaacc agagcagttt      1020
     gaggttgcaa acacccgatc aactcaagaa cagttccaag catggtatga aggagttaaa      1080
     ggggattatg gtgttgacga cacaggaatg gggatcttat tgaatggact aatggtttgg      1140
     tgcattgaaa atggcacatc cccaaatata aatggtgtgt ggacaatgat ggatggtgat      1200
     gagcaggtga catatccaat taaaccatta ctggaccatg cagtgcctac ttttaggcag      1260
     attatgacgc acttcagtga cgttgctgaa gcttacatag aaatgcgaaa ccgtacaaag      1320
     gcgtacatgc caagatatgg tctacaacgt aatttgactg atatgagtct tgcgcgatat      1380
     gcatttgatt tttacgagct gcattcaact acacctgcac gtgctaaaga agcacatttg      1440
     cagatgaagg cagccgcact taagaatgcg cgaaatcggt tgtttggttt ggacggaaac      1500
     gtctccacgc aagaagaaga tacggagagg cacacgacaa ctgatgttac tagaaatata      1560
     cataacctct taggaatgag gggtgtgcaa taggacatct tctgcactgt agtttatact      1620
     tatgttatct ttagtatgcc tttaatttaa attcgtgtct ttcagtcccg aaggagatgg      1680
     ttgaatgcat aacatggtgg gattatatct cggttattgc atttgagaag tcacctttct      1740
     attacgtatc ataagggact cttaaaagtg aggagtacct cgtaagaaaa gcctttttgg      1800
     ttcgtgatcg agcc                                                        1814
//