ID EF155983; SV 1; linear; genomic RNA; STD; VRL; 4224 BP. XX AC EF155983; XX DT 05-OCT-2010 (Rel. 106, Created) DT 19-NOV-2010 (Rel. 106, Last updated, Version 2) XX DE Sweet potato feathery mottle virus isolate 15KAP polyprotein gene, partial DE cds. XX KW . XX OS Sweet potato feathery mottle virus OC Viruses; Riboviria; Potyviridae; Potyvirus. XX RN [1] RP 1-4224 RX DOI; 10.1111/j.1365-294X.2010.04682.x. RX PUBMED; 20609081. RA Tugume A.K., Cuellar W.J., Mukasa S.B., Valkonen J.P.; RT "Molecular genetic analysis of virus isolates from wild and cultivated RT plants demonstrates that East Africa is a hotspot for the evolution and RT diversification of sweet potato feathery mottle virus"; RL Mol. Ecol. 19(15):3139-3156(2010). XX RN [2] RP 1-4224 RA Tugume A.K., Cuellar W.J., Mukasa S.B., Valkonen J.P.T.; RT ; RL Submitted (30-NOV-2006) to the INSDC. RL Department of Applied Biology, University of Helsinki, P.O. Box 27 RL (Latokartanonkaari 7), Helsinki FIN-00014, Finland XX DR MD5; d8d28358e1b95a6738008a692ee46aad. XX FH Key Location/Qualifiers FH FT source 1..4224 FT /organism="Sweet potato feathery mottle virus" FT /host="Hewittia sublobata" FT /isolate="15KAP" FT /mol_type="genomic RNA" FT /country="Uganda:Kapchorwa" FT /isolation_source="leaf" FT /db_xref="taxon:12844" FT CDS <1..4002 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="GOA:E1U276" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR001592" FT /db_xref="InterPro:IPR001730" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR009003" FT /db_xref="UniProtKB/TrEMBL:E1U276" FT /protein_id="ABO92945.1" FT /translation="GATSCVLHQTKDALSKHLRLKGVWNKSVITQDLFILAGVFAGGLW FT MIMAGLKESFDQTVLHQGKEKRQMQKLKFRKARDNKLGFEVHADDGTIEHFFGSAYTKK FT GKQKGKVTGMGSKNRKFINMYGFDPTEYSFVRFVDPLTGAVIDDSPYTDILLVQEKIGE FT ARLNAIKEDELSREKVAQNPGIHAYYVNEITNAALKVDLTPHNPLLACERHSTIAGHPE FT YEGVLRQTGPPIKMTLTDVPVNPEEASLVGHESKSLFRGLRDYNPIASVICHLMNEADG FT RTSDCFGIGYGGLIITNRHLFKRNNGTLTIKSRHGEFVIKNTTQLGMKPCADRDILIIR FT MPKDIPPFPQRLKFRVPKENERICLVGSNFQDKSITSTISETSVTCHVPNSHFWKHWID FT TKDGHCGLPLVSTTDGALLGVHSLSNLTNTQNFFASFPENFEVDYLKTPEAMDWIKKWS FT YNPDEICWGTLELKTGQPVAPFKVSKLITDLEGIQVYAQTRSDRWVQDRLHGNLKAVGR FT CPAQLVTKHVVKGKCMLFDLYLQQDQSEREYFKPLMGAYGKSKLNKEAYNKDLFKYATQ FT IQAGDVQVDTFELAERSVVSMLTSKGFEKCSYITDPEEILKALNMKAAVGAMYSGKKKD FT YFEGMSDHDVENHLFHSCKRLFMGHKGLWNGSLKAELRPMEKVELNKTRTFTAAPLDTL FT LGGKVCVDDFNNMFYNHHLKCPWTVGITKFYQGWDRLLTSLPEGWVYCDADGSQFDSSL FT SPYLINSVLNIRREFMEDWDVGDQMLRNLYTEIVYTPILTPDGTIVKKFKGNNSGQPST FT VVDNTLMVVLAVHYTLLKLGIQESEFDKCCVFFANGDDLLLAMRPDTAHLLDQFSECFS FT ELGLNYDFSSRTNKKEDLWFMSHCGVKRDGIFIPKLEPERIVSILEWDRSHEPIHRLEA FT ICAAMVESWGYDELLHHIRKFYAWVLDQAPYNELARNGKAPYIAETALKALYTGVQPNA FT SELSVYTRVLKEMYDDSMLQENDLEVYHQSNERTEFKDAGANPPAPKPKDIPPPLTITE FT ITDPEDPKQAALKAARAKQPAVTPESYGRDTSKERESIVGTSSKGVRDKDVNVGTVGTF FT VVPRVKMNANKKRQPMVNGRAIINFQHLSIYEPEQFEVANTRSTQEQFQAWYEGVKGDY FT GVDDTGMGILLNGLMVWCIENGTSPNINGVWTMMDGDEQVTYPIKPLLDHAVPTFRQIM FT THFSDVAEAYIEMRNRTKAYMPRYGLQRNLTDMSLARYAFDFYELHSTTPARAKEAHLQ FT MKAAALKNARNRLFGLDGNVSTQEEDTERHTTTDVTRNIHNLLGMRGVQ" FT mat_peptide <1..27 FT /product="cytoplasmic inclusion protein" FT /note="CI" FT mat_peptide 28..186 FT /product="6K2 protein" FT mat_peptide 187..762 FT /product="VPg protein" FT mat_peptide 763..1491 FT /product="NIa-Pro protein" FT mat_peptide 1492..3054 FT /product="nuclear inclusion body protein" FT /note="NIb" FT mat_peptide 3055..3999 FT /product="coat protein" FT /note="CP" XX SQ Sequence 4224 BP; 1367 A; 769 C; 979 G; 1109 T; 0 other; ggagccacct cttgtgtgct tcatcaaaca aaagatgcac tctcaaagca ccttcgtttg 60 aaaggagtgt ggaataaatc agtcatcaca caggatttgt tcattttagc aggggtattt 120 gctggtggtt tgtggatgat aatggcgggg ctaaaggaat catttgatca aactgtgctg 180 caccaaggaa aagaaaagcg ccaaatgcaa aagctgaagt ttaggaaagc gcgagataat 240 aaacttggat tcgaagtaca cgctgatgat ggaactatcg aacacttctt tggtagtgca 300 tacaccaaga aagggaaaca aaaaggaaag gttactggaa tgggatcaaa gaacaggaaa 360 tttataaaca tgtacggatt tgatcccact gaatattcct ttgtccgatt tgttgacccg 420 ctaactggag ctgtgataga tgattctcca tatacagata ttcttcttgt tcaggagaag 480 attggtgagg ctcgtttgaa tgccatcaaa gaagatgaac tttcaagaga gaaagttgca 540 caaaatccag gaattcatgc atactatgtc aatgaaatca caaatgctgc actcaaagtt 600 gatcttacac cgcacaatcc attacttgca tgtgaaagac atagcaccat tgccggtcat 660 cctgaatatg aaggagtttt gagacaaacc ggacccccaa ttaagatgac acttactgac 720 gtgccagtaa atcctgaaga ggcaagttta gtcgggcatg agagtaagtc actattcaga 780 ggcttaaggg attacaaccc aatagcaagt gttatatgtc acctaatgaa tgaagcggat 840 gggagaacaa gcgactgctt tggaatcgga tacggtggtc tcattataac aaataggcat 900 cttttcaaaa ggaacaatgg cacattaaca attaaatctc gacatggaga atttgttatc 960 aagaacacaa cccaacttgg gatgaaacct tgtgctgaca gagacatact catcattagg 1020 atgcctaagg atatacctcc gtttccacaa cgcctgaaat ttagggttcc aaaagaaaat 1080 gaaagaatct gcttggttgg atcaaatttt caggataaat caatcacaag tacgatttct 1140 gaaaccagcg taacgtgcca tgtgccaaat tcgcattttt ggaagcactg gatcgataca 1200 aaagatggac attgtggtct tcccttagta agtactactg atggtgcttt gttgggagtg 1260 catagcctat caaatttgac gaacactcag aatttctttg catcatttcc tgagaacttt 1320 gaagtggact atttgaaaac tcctgaggca atggattgga taaagaagtg gagttataat 1380 ccagatgaaa tttgttgggg aacgctggaa ctgaagacag gacaacccgt tgccccattc 1440 aaagtgtcca aactaatcac ggacttagaa ggcatacaag tgtatgctca aacaaggtca 1500 gatagatggg ttcaagatag actacatggc aatcttaaag cagttggtcg atgtcctgca 1560 caattggtta ctaagcacgt tgtaaaggga aaatgcatgc tatttgacct atatttgcag 1620 caagatcaat ctgaaaggga gtatttcaaa cctcttatgg gagcatacgg gaaaagtaag 1680 ctcaacaaag aggcgtataa taaggatttg tttaagtatg cgacacaaat tcaggcagga 1740 gatgtgcaag tggatacgtt cgaattggcg gaaagatctg ttgtttccat gctcacatca 1800 aaaggatttg aaaagtgcag ctacatcaca gatccagagg aaattctgaa agcactgaat 1860 atgaaagctg cagtcggtgc gatgtacagt ggaaagaaga aggattactt tgaaggaatg 1920 agtgatcacg atgtagaaaa ccatcttttc cacagttgca agcgtttgtt catgggacac 1980 aaaggtcttt ggaatggatc cttgaaagct gagttgagac ctatggaaaa agtggaactt 2040 aacaaaacaa gaaccttcac agcggctcct cttgacacgt tacttggtgg taaggtgtgt 2100 gtagacgatt tcaataacat gttttacaac caccatttaa aatgtccatg gacggtagga 2160 ataaccaaat tctaccaagg atgggatagg cttctcacat ctctacctga gggatgggtt 2220 tattgtgacg ctgatggctc gcaatttgat agttctctct ctccatattt gattaactca 2280 gttcttaata taagaagaga atttatggag gattgggatg ttggtgatca aatgcttcgg 2340 aatttataca cagaaatagt gtacacacca atactgacac cagatggaac catagtgaag 2400 aagttcaaag gtaacaacag tggacagcca tccactgtgg ttgataatac acttatggtt 2460 gtgttagcag ttcactacac actactgaaa ctaggaatcc aagaaagtga gtttgataaa 2520 tgctgtgtct ttttcgcaaa tggtgatgat ttattgttgg caatgaggcc agatacagcc 2580 catttattgg accagtttag tgaatgtttt tctgaattag gactcaatta tgacttttca 2640 tcacgaacaa ataagaaaga agatctatgg tttatgtcac actgtggcgt gaaacgtgat 2700 ggaatattca ttccaaagtt ggagcctgaa aggattgttt caattcttga atgggatcgt 2760 tcacacgaac caattcatcg gctggaagca atatgtgccg cgatggtaga atcgtggggt 2820 tatgatgaac ttcttcatca tattagaaaa ttctatgcat gggttttgga ccaagcccca 2880 tacaatgaac tagcacgaaa tggaaaagca ccatacatag ctgaaactgc actcaaagca 2940 ctttatactg gtgttcaacc taatgcttct gaattgagtg tgtatacgag agtgctcaaa 3000 gaaatgtatg atgacagcat gctccaagag aatgatttgg aagtatatca tcaatctaat 3060 gagagaactg aatttaaaga tgcaggagcg aaccctccag cccctaagcc taaggacatt 3120 cctccaccac tcacaataac tgaaatcact gatccagagg acccgaagca ggcagctttg 3180 aaagctgcac gagcaaagca acccgcagtc actccagaat catatggacg agatacgagc 3240 aaagaaaggg agtcaatagt ggggacatca tcaaagggcg tgagggataa agatgtgaat 3300 gttggcaccg ttggtacgtt cgttgtgcca cgtgtcaaga tgaatgcaaa caagaaaagg 3360 caaccaatgg tcaatggaag ggccattata aatttccagc acttgtcaat atatgaacca 3420 gagcagtttg aggttgcaaa cacccggtcg actcaagagc aattccaagc atggtatgag 3480 ggagttaaag gggattacgg tgttgacgac acaggaatgg ggatcttatt gaatggacta 3540 atggtttggt gcattgaaaa tggcacatcc ccaaatataa atggtgtgtg gacaatgatg 3600 gacggtgatg agcaagtgac atacccaatt aaaccattat tggatcatgc agtgcctact 3660 tttaggcaga tcatgacgca cttcagtgac gttgctgaag cctatataga aatgcgaaac 3720 cgtacaaagg cgtacatgcc aaggtatggt ctacaacgta atttgactga tatgagtctt 3780 gcgcgatatg catttgattt ttacgagctg cattcaacta cacctgcacg tgctaaagaa 3840 gcacatttac agatgaaggc agctgcactt aagaatgcgc gaaatcggtt gtttggttta 3900 gacggaaacg tctccacgca agaagaagat acggagaggc acacgacaac tgatgttact 3960 agaaatatac ataacctctt aggaatgagg ggtgtgcaat aggacatcct ctgcactgta 4020 gcttatactt atgttatctt tagtatgcct ttaatttaaa ttcgtgtctt tcagtcccga 4080 aggagatggt tgagtgcata acatggtggg attatatctc gggttattgc atttgagaag 4140 tcacctttct attacgtatc ataagggact cttaaaagtg aggagtacct cgtaagaaaa 4200 gcctttttgg ttcgtgatcg agcc 4224 //