ID   DQ631852; SV 1; linear; genomic RNA; STD; VRL; 767 BP.
XX
AC   DQ631852;
XX
DT   29-MAY-2008 (Rel. 95, Created)
DT   06-JUN-2008 (Rel. 96, Last updated, Version 2)
XX
DE   Barley yellow dwarf virus-PAV isolate Yolo_278_PAV coat protein gene,
DE   partial cds.
XX
KW   .
XX
OS   Barley yellow dwarf virus PAV
OC   Viruses; Riboviria; Luteoviridae; Luteovirus.
XX
RN   [1]
RP   1-767
RA   Newton L.A., Linton E.W., Malmstrom C.M.;
RT   "Secrets of the herbarium: Historic associations among RNA viruses and wild
RT   grass hosts";
RL   Unpublished.
XX
RN   [2]
RP   1-767
RA   Newton L.A., Linton E.W., Malmstrom C.M.;
RT   ;
RL   Submitted (12-MAY-2006) to the INSDC.
RL   Department of Plant Biology, Michigan State University, 166 Plant Biology
RL   Laboratories, East Lansing, MI 48824, USA
XX
DR   MD5; 58d25c0fee6d3a77cd0f4cf1d554add8.
DR   GrainGenes; DQ631852; DQ631852.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..767
FT                   /organism="Barley yellow dwarf virus PAV"
FT                   /host="Avena fatua"
FT                   /isolate="Yolo_278_PAV"
FT                   /mol_type="genomic RNA"
FT                   /country="USA:California, Yolo County"
FT                   /isolation_source="wild host with natural infection in
FT                   field experiment"
FT                   /collection_date="2002"
FT                   /note="acronym: BYDV"
FT                   /db_xref="taxon:2169986"
FT   CDS             202..>767
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="ORF3"
FT                   /db_xref="GOA:B3EYA8"
FT                   /db_xref="InterPro:IPR001517"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:B3EYA8"
FT                   /protein_id="ABG24223.1"
FT                   /translation="MNSVGRRGPRRANQNGTRRRRRRTVRPVVVVQPNRAGPRRRNGRR
FT                   KGRGGANPVFRPTGGTEVFVFSVDNLKANSSGAIKFGPSLSQCPALSDGILKSYHRYKI
FT                   TSIRVEFKSHASATTAGAIFIELDTACKQSALASYINSFTISRTASKVFRAEAINGKEF
FT                   QESTIDQFWMLYKANGTTTDTAGQF"
XX
SQ   Sequence 767 BP; 232 A; 198 C; 174 G; 163 T; 0 other;
     ccaactccag agcgtgaagg tgacgactcc acatctgcaa tcaatactac tttccatacc        60
     ggaaaaccac tcacaaaacg aatattaatt accaaatctt agctgggttt gggatagggt       120
     tcatagttag tataccctgt acattagctc tcgcgtactt tatttacaat aaagtttcag       180
     acaccactag agaggtggtg aatgaattca gtaggccgta gaggacctag acgcgcaaat       240
     caaaatggca caagacggag gcgccgtaga acagttcggc cagtggttgt ggtccaaccc       300
     aatcgagcag gacccagacg acgaaatggt cgacgcaagg gaagaggagg ggcaaatcct       360
     gtatttagac caacaggcgg gactgaggta ttcgtattct cagtcgacaa ccttaaagcc       420
     aactcttccg gggcaatcaa attcggcccc agtctatcgc aatgcccagc gctttcagac       480
     ggaatactta agtcctacca ccgttacaag atcacaagta tccgtgttga gtttaagtca       540
     cacgcgtccg caaccacggc cggcgctatc tttattgaac tcgacaccgc gtgcaaacaa       600
     tcagccctgg ctagctacat taattccttc acaatcagca ggaccgcctc aaaggtcttc       660
     agagccgaag cgattaacgg gaaggaattc caggaatcaa cgatagacca gttttggatg       720
     ctctacaaag ccaatggaac caccactgac acggcaggac aattcat                     767
//