ID DQ520942; SV 1; circular; genomic DNA; STD; VRL; 2609 BP. XX AC DQ520942; XX DT 28-MAY-2006 (Rel. 87, Created) DT 11-MAR-2007 (Rel. 91, Last updated, Version 2) XX DE Euphorbia mosaic virus - B [Mexico:Jalasco:Pepper:2005] segment A, complete DE sequence. XX KW . XX OS Euphorbia mosaic virus - B [Mexico:Jalasco:Pepper:2005] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2609 RA Bernal-Alcocer A., Alpuche-Solis A.G., Virgen-Calleros G., RA Frias-Trevino G.A., Zarate V., Ambriz-Granados S., Arguello-Astorga G.R.; RT "Pepper mosaic Jalisco virus, a new begomovirus of the SLCV lineage"; RL Unpublished. XX RN [2] RP 1-2609 RA Bernal-Alcocer A., Alpuche-Solis A.G., Virgen-Calleros G., RA Frias-Trevino G.A., Zarate V., Ambriz-Granados S., Arguello-Astorga G.R.; RT ; RL Submitted (29-APR-2006) to the INSDC. RL Molecular Biology, Instituto Potosino de Investigacion Cientifica y RL Tecnologica, A.C., Camino a la Presa San Jose 2055, San Luis Potosi, SLP RL 78231, Mexico XX DR MD5; 94708da07a04f462efe65b68ff5d31a4. DR EuropePMC; PMC2974675; 20958988. XX FH Key Location/Qualifiers FH FT source 1..2609 FT /organism="Euphorbia mosaic virus - B FT [Mexico:Jalasco:Pepper:2005]" FT /segment="A" FT /host="Capsicum annum" FT /isolate="CC-Jalisco-1" FT /mol_type="genomic DNA" FT /country="Mexico" FT /collection_date="2005" FT /db_xref="taxon:429329" FT gene 198..953 FT /gene="AV1" FT CDS 198..953 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /note="capsid protein; CP; AR1" FT /db_xref="GOA:Q19LG7" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q19LG7" FT /protein_id="ABF67521.1" FT /translation="MVKRDAPWRLSAGTYKVSRSSNYSPRGGMGPKLDKAAAWVNRPMY FT RKPRIYRTLRGPDVPKGCEGPCKVQSYEQRHDISHVGKVMCISDVTRGNGITHRVGKRF FT CVKSVYILGKIWMDENIKLRNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATV FT KNDLRDRYQVMHKFYAKVTGGQYASNEQALVKRFWKVNNHVVYNHQEAGKYENHTENAL FT LLYMACTHASNPVYATLKIRIYFYDSIMN" FT gene complement(950..1348) FT /gene="REn" FT CDS complement(950..1348) FT /codon_start=1 FT /gene="REn" FT /product="replication enhancer protein" FT /note="rep-interacting protein; AC3; AL3" FT /db_xref="GOA:Q19LG6" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q19LG6" FT /protein_id="ABF67524.1" FT /translation="MDSRTGGSITASQAENSVFIWEVPNPLYFKMCRVEDPPHTWVRIY FT HIQIRFNYNLRKELSLHQAYLNFQVWTTSVRASGTTYLSRFRHLVMLYLDRLGVIGINN FT VIRAVRFATDRSYVNYVLEDHEIKVKIY" FT gene complement(1089..1484) FT /gene="AC2" FT CDS complement(1089..1484) FT /codon_start=1 FT /gene="AC2" FT /product="transactivator protein TrAP" FT /note="transcription factor; silencing suppressor; FT regulation of virus late genes expression, suppressor of FT the plant silencing response; AL2" FT /db_xref="GOA:Q19LG5" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q19LG5" FT /protein_id="ABF67523.1" FT /translation="MLNSSSSTPPSIKPQHRIAKKRAIRRRRIDLNCGCSIYLHINCAD FT NGFTHRGKHHCVSGREFRFYLGGSKSPLFQDVPSRGSTSYVGQNIPHTNPVQLQPQEGA FT ESTPSLPELPSLDDISSSFWDDLFKSL" FT gene complement(1396..2475) FT /gene="AC1" FT CDS complement(1396..2475) FT /codon_start=1 FT /gene="AC1" FT /product="replication protein" FT /note="rolling-circle initiator protein; initiator of virus FT replication via a RC mechanism; Rep; AL1" FT /db_xref="GOA:Q19LG4" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q19LG4" FT /protein_id="ABF67522.1" FT /translation="MPRNPNSFRIQARNIFLTYPQCDVPKDEVLQMLQHLPWSIVKPTY FT IRVAREEHRDGFPHLHCLIQLSGKSNIKDARFFDISHPRRSACFHPNIQGAKDTNAVKN FT YITKDGDYCESGQYKVSGGTKSNKDDVYHNAVNAASAGEALDIIKAGDPKTFIVSYHNV FT KANIERLFKKAADPWVPPFPLSSFVNVPEEMQEWADDYFGRGAAARPERPISLIVEGDS FT RTGKTMWARALGPHNYLSGHLDFNSKVYSNQVEYNVIDDVNPQYLKLKHWKELIGAQKD FT WQSNCKYGKPVQIKGGIPSIVLCNPGEGGSYKDFLEKEENASLRAWTLKNAKFVFLNSP FT LYQATAQDCQEESHTSTTN" FT gene complement(2031..2408) FT /gene="AC4" FT CDS complement(2031..2408) FT /codon_start=1 FT /gene="AC4" FT /product="AC4" FT /note="AL4" FT /db_xref="UniProtKB/TrEMBL:Q19LG3" FT /protein_id="ABF67525.1" FT /translation="MFPKMKFFRCFNIFLGRSSNRRTSVSPERNIAMGSRTYTASYNYL FT ASPTSRMLDFSTYLTPDGQPVFTRTSREPKTPTPSRITSPKTAIIVNPGNIRCLGVQSP FT TKTTYITTPSMQQVRERLSTL" XX SQ Sequence 2609 BP; 660 A; 597 C; 622 G; 730 T; 0 other; accggatggc cgcgattttt tcggagtccc tcggcccagg cccaaacgca aagctattct 60 cgtcctttta tgggaccact acaactattt actgaccaat cattttgcgt ctgacgcgtc 120 tagataatca tgacttaccc accaagctgt ggtccctata aataaagatg attagtccca 180 tacctcttta attcaaaatg gttaagaggg atgccccatg gcgactatcg gcggggacct 240 ataaggtttc ccgctcttct aactattcgc ctcgtggagg tatgggcccc aaattggata 300 aggccgctgc gtgggttaat aggcccatgt acaggaagcc caggatctat cggacgctga 360 gagggcccga cgttcccaaa ggctgtgaag ggccctgcaa ggttcagtct tacgagcagc 420 ggcacgacat ctctcacgtt ggtaaggtga tgtgcatatc tgacgtgacc cgtggtaacg 480 gtataacaca tcgtgtaggc aagcgtttct gcgtcaagtc tgtatatatt ttagggaaga 540 tatggatgga cgagaatatc aagttgagga accatactaa cagcgtcatg ttctggctgg 600 ttagagatcg tagaccgtat ggaactccta tggattttgg ccaagtgttc aacatgttcg 660 acaacgagcc cagtacagct acggtcaaga acgatctccg cgatcggtac caggttatgc 720 acaagtttta cgcgaaggtt accggtggtc aatacgcgag caacgagcag gcgttggtta 780 agcggttctg gaaggtgaac aaccatgtgg tctacaacca tcaggaagca gggaaatatg 840 agaatcatac ggagaacgcg ttgttattgt atatggcgtg tactcatgca tctaaccccg 900 tgtatgcgac attgaaaatt cggatctatt tttatgattc gataatgaat taataaattt 960 taacttttat ttcatgatct tcgagtacat aatttacata tgaacggtct gttgcgaaac 1020 gcacagctct aataacatta ttaattccaa tcacaccaag ccgatctaaa tacaacataa 1080 ctaaatgtct aaagcgactt aaataagtcg tcccagaagc tcgaactgat gtcgtccaaa 1140 cttggaagtt caggtaggct tggtgtagac tcagctcctt cctgaggttg tagttgaacc 1200 ggatttgtat gtggtatatt ctgacccacg tatgaggtgg atcctctact cggcacatct 1260 tgaaatagag gggatttgga acctcccaaa taaaaacgga attctctgcc tgagacgcag 1320 tgatgcttcc ccctgtgcgt gaatccatta tccgcgcagt ttatgtggag gtatatggaa 1380 cagccgcagt tcaagtcaat tcgtcgtcga cgtatggctc tcttcttggc aatcctgtgc 1440 tgtggcttga tagagggggg agttgaggaa gacgaattta gcatttttta atgtccaggc 1500 tctcagtgat gcattttcct ctttctcgag gaaatcttta taggaccccc cctctcctgg 1560 attgcacagc acgattgatg ggataccccc tttaatttga accggctttc catatttaca 1620 gttggactgc cagtcctttt gggccccaat caattccttc cagtgcttta gctttaagta 1680 ttgcggattg acatcatcta tgacgttata ctccacttga ttggagtata ctttggaatt 1740 gaaatcgaga tgaccgctca gataattatg tgggcctagc gctctagccc acatcgtctt 1800 gcccgtccgt gaatcccctt cgactatcaa actaatcggt ctctctggcc gcgcagcggc 1860 accccttcca aaataatcat ccgcccactc ttgcatctct tccggtacat taacgaacga 1920 cgacagtgga aacgggggaa cccatggatc cgcagctttt ttgaagaggc gctcgatgtt 1980 ggccttaaca ttatgataac tgacgataaa cgttttagga tcaccagcct ttataatgtc 2040 gagagcctct cccgcacttg ctgcattgac ggcgttgtga tatacgtcgt ctttgttgga 2100 ctttgtaccc ccagacacct tatattgccc ggattcacaa taatcgccgt ctttggtgat 2160 gtaattcttg acggcgttgg tgtctttggc tccctggatg ttcgggtgaa aacaggctga 2220 ccgtctgggg tgagatatgt cgaaaaatct agcatccttg atgttggact tgccagataa 2280 ttgtatgagg cagtgtaagt gcgggaaccc atcgcgatgt tcctctctgg cgacacggat 2340 gtacgtcggt ttgacgatcg accaaggaag atgttgaagc atctgaagaa cttcatcttt 2400 gggaacatcg cactgcggat atgttaagaa gatatttctg gcttgtatac gaaatgaatt 2460 agggtttcgt ggcatttttg taattatgac ccaggactcc aagggagctc tctcataaaa 2520 cctattgttt gtggagtcct ggagtcccat ttatacataa agtcctctag gactccaagg 2580 ggcacgtggc ggccatccgc aataatatt 2609 //