ID DQ376181; SV 1; linear; genomic RNA; STD; VRL; 2934 BP. XX AC DQ376181; XX DT 06-MAR-2006 (Rel. 87, Created) DT 05-AUG-2023 (Rel. 144, Last updated, Version 2) XX DE Tomato spotted wilt virus isolate P272 nonstructural protein (NSs) and DE nucleocapsid (N) genes, complete cds. XX KW . XX OS Orthotospovirus tomatomaculae OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Tospoviridae; Orthotospovirus. XX RN [1] RP 1-2934 RA Margaria P., Ciuffo M., Turina M.; RT "Molecular characterization of resistance-breaking strains of tomato RT spotted wilt virus (Tospovirus, Bunyaviridae) infecting resistant pepper RT carrying the TSW gene"; RL Unpublished. XX RN [2] RP 1-2934 RA Margaria P., Ciuffo M., Turina M.; RT ; RL Submitted (25-JAN-2006) to the INSDC. RL IVV, CNR, Strada Delle Cacce 73, Torino, TO 10135, Italy XX DR MD5; 455a60cac30bd0f7b88075f6c4c259cd. XX FH Key Location/Qualifiers FH FT source 1..2934 FT /organism="Orthotospovirus tomatomaculae" FT /segment="S" FT /host="pepper" FT /isolate="P272" FT /mol_type="genomic RNA" FT /country="Italy" FT /isolation_source="open field in the Italian Riviera" FT /note="resistance-breaking strain from resistant pepper" FT /db_xref="taxon:3052585" FT gene 89..1492 FT /gene="NSs" FT CDS 89..1492 FT /codon_start=1 FT /gene="NSs" FT /product="nonstructural protein" FT /note="putative silencing suppressor" FT /db_xref="InterPro:IPR004915" FT /db_xref="UniProtKB/TrEMBL:Q27U64" FT /protein_id="ABD38694.1" FT /translation="MSSSVYESIIQTRASVWGSTASGKAVVDSYWIHELGTGSQLVQTQ FT LYSDSRSKSSFGYTAKVGDLPCEEEEILSQHVCIPIFDDIDFSINIDDSVLALSVCSNT FT VNANGVKHQGHLKVLSPAQLHSIGSIMNRSDITDRFQLQEKDIIPNDRYIEAANKGSLS FT CVKEHTYKIEMCYNQALGKVNVLSPNRNVHEWLYSFKPNFNQVESNNRTVNSLAVKSLL FT MSAENNIMPNSQAFVKASTDSHFRLSLWLRVPKVLKQISIQKLFKVAGDETNKTFYLSI FT ACIPNYNSVETALNITVICKHQLPIRKFKAPFELSMMFSDLKEPYNIVHDPSYPQRIVH FT ALLETHTSFAQVLCNNLQEDVIIYTLNNHELTPGKLDLGEKTLNYSEDAYKRKYFLSKT FT LECLPSNTQTMSYLDSIQIPSWKIDFARGEIKISPQSISVAKSLLKLDLSGIKKKESKI FT KEAHASGSK" FT gene complement(2007..2783) FT /gene="N" FT CDS complement(2007..2783) FT /codon_start=1 FT /gene="N" FT /product="nucleocapsid" FT /db_xref="GOA:Q88910" FT /db_xref="InterPro:IPR002517" FT /db_xref="UniProtKB/TrEMBL:Q88910" FT /protein_id="ABD38695.1" FT /translation="MSKVKLTKESIVALLTQGKDLEFEEDQNLVAFNFKTFCLENLDQI FT KKMSVISCLTFLKNRQSIMKVIKQSDFTFGKITIKKTSDRIGATDMTFRRLDSLIRVRL FT VEETGNSENLNTIKSKIASHPLIQAYGLPLDDAKSVRLAIMLGGSLPLIASVDSFEMIS FT VVLAIYQDAKYKDLGIDPKKYDTREALGKVCTVLKSKAFEMNEDQVKKGKEYAAILSSS FT NPNAKGSIAMEHYSETLNKFYEMFGVKKQAKLAELA" XX SQ Sequence 2934 BP; 924 A; 550 C; 473 G; 987 T; 0 other; agagcaattg ggccataatt ttattcttaa tcaaacctca cttagaaaat cacaatactg 60 taataagaac acagtaccaa taaccataat gtcttcaagt gtttatgagt cgatcattca 120 gacaagagct tcagtctggg gatcaactgc atctggtaaa gctgttgtag attcttactg 180 gattcatgaa cttggtactg gttctcaact agttcagacc caactgtatt ctgattcaag 240 aagcaaaagt agctttggct atactgcaaa agtaggggat cttccttgtg aagaagaaga 300 gattctttct cagcatgtgt gtatccctat ttttgatgat attgatttta gcatcaatat 360 tgatgactct gttctggcat tatctgtttg ctcaaataca gtcaatgcta atggagtgaa 420 acatcaaggt catttgaagg ttttgtctcc tgctcagctc cactctattg gatctatcat 480 gaacagatct gatattacgg atcgattcca gctccaagaa aaagatataa ttcccaatga 540 cagatacatt gaagctgcaa acaaaggctc tttgtcttgt gtcaaggagc atacctataa 600 gatcgagatg tgctataatc aagctttagg caaagtgaat gttctatctc ctaatagaaa 660 tgtccatgaa tggctgtaca gtttcaagcc aaatttcaat caagttgaaa gcaacaacag 720 aactgtgaat tctcttgcag tgaaatctct gctcatgtca gcagaaaaca acatcatgcc 780 taactctcaa gcttttgtca aagcttccac tgattctcat ttcaggctga gcctctggct 840 aagggttcca aaggttttga agcagatttc cattcagaaa ttgttcaagg ttgcaggaga 900 tgaaacaaat aaaacatttt atttatctat tgcctgcatt ccaaactata acagtgttga 960 gacagcttta aacattactg ttatttgcaa acatcagctc ccaattcgta aatttaaagc 1020 tccttttgaa ttatcaatga tgttttctga tttaaaggag ccttacaaca ttgttcatga 1080 tccttcatat ccccaaagga ttgttcatgc tctgcttgaa actcacacat cttttgcaca 1140 agttctttgc aacaacttgc aagaagatgt gatcatctac accttgaaca accatgagct 1200 aactcctgga aagttagatt taggtgaaaa aaccttgaat tacagtgaag atgcctacaa 1260 aaggaaatat ttcctttcaa aaacacttga atgtcttcca tctaacacac aaactatgtc 1320 ttatttagac agcatccaaa tcccttcctg gaagatagac tttgccaggg gagaaattaa 1380 aatttctccg caatctattt cagttgcaaa atctttgtta aagcttgatt taagcgggat 1440 caaaaagaaa gaatctaaaa ttaaggaagc acatgcttca ggatcaaaat gatcttgctg 1500 tgtccagctt tttctaatta tgttatgttt attttcctcc tttgcttata attatttctc 1560 tgtttgtcat ttctttcaaa ttcctcctgc ctagtagaaa ccataaaacc aaaaataaaa 1620 ataaaataaa atcaaaataa aataaaaatc aaaaaatgaa ataaaaacaa caaaaaatta 1680 aaaaacaaaa aaccaaaaaa gatcccgaaa gggacaattt tggccaaatt tgggttttgt 1740 ttttgttttt tgttttttgt tttttgtttt ttatttttat tttttatttt ttatttttta 1800 ttttacttta ttttattttt atttgttttt attttatgtt ttttgttggt tttttattat 1860 gttatttatt aagcacaaca cacagaaagc aaactttaat taaacacact tatttaaaat 1920 ttaacacact aagcaagcac aagcaataaa gataaagaaa gctttatata tttataggtt 1980 ttttataatt taacttacag ctgcttttaa gcaagttctg cgagttttgc ctgtttttta 2040 accccaaaca tttcatagaa cttgttaaga gtttcactgt aatgttccat agcaatactt 2100 cctttagcat taggattgct ggagctaagt atagcagcat actctttccc cttcttcacc 2160 tgatcttcat tcatttcaaa tgctttgctt ttcagcacag tgcaaacttt ccctaaggct 2220 tccctggtgt catacttctt tgggtcgatc ccaaggtcct tgtattttgc atcctgatat 2280 atagccaaga caacactgat catctcaaag ctatcgactg aagcaataag aggtaagcta 2340 cctcccagca ttatggcaag cctcacagac tttgcatcat caagaggtaa tccataggct 2400 tgaatcaaag ggtgggaagc aatcttagat ttgatagtat tgagattctc ggaattccca 2460 gtttcctcaa caagcctgac cctgatcaag ctatcaagcc ttctgaaggt catgtcagtg 2520 gctccaatcc tgtctgaagt tttctttatg gtaattttac caaaagtaaa atcactttgc 2580 ttaataacct tcattatgct ctgacgattc ttcaggaatg tcagacatga aataacactc 2640 atctttttga tctggtcaag gttttccaga caaaaagtct tgaagttgaa tgctaccaga 2700 ttctgatctt cctcaaactc aaggtctttg ccttgtgtca acaaagcaac aatgctttcc 2760 ttagtgagct taaccttaga catgatgatc gtagaagttg ttatatgctt tgaccgtatg 2820 taactcaagg tgcaaaagtg caactctgta tcccgcagtc gtttcttagg gttttaatgt 2880 gatgatttgt aagactgagt gttaaggttt gaataaaatt gacacaattg ctct 2934 //