ID   DQ314753; SV 1; linear; mRNA; STD; VRL; 666 BP.
XX
AC   DQ314753;
XX
DT   01-JAN-2006 (Rel. 86, Created)
DT   22-APR-2009 (Rel. 100, Last updated, Version 2)
XX
DE   Alfalfa mosaic virus isolate Ca401 coat protein (CP) mRNA, complete cds.
XX
KW   .
XX
OS   Alfalfa mosaic virus
OC   Viruses; Riboviria; Bromoviridae; Alfamovirus.
XX
RN   [1]
RP   1-666
RX   DOI; 10.1094/PHYTO-96-1237.
RX   PUBMED; 18943961.
RA   Xu H., Nie J.;
RT   "Identification, Characterization, and Molecular Detection of Alfalfa
RT   mosaic virus in Potato";
RL   Phytopathology 96(11):1237-1242(2006).
XX
RN   [2]
RP   1-666
RA   Xu H., Nie J.;
RT   ;
RL   Submitted (05-DEC-2005) to the INSDC.
RL   Charlottetown Laboratory, Canadian Food Inspection Agency, 93 Mt. Edward
RL   Rd., Charlottetown, PE C1A 5T1, Canada
XX
DR   MD5; 01f96537bace68b576b2414cc12a7ca3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..666
FT                   /organism="Alfalfa mosaic virus"
FT                   /chromosome="RNA3"
FT                   /isolate="Ca401"
FT                   /mol_type="mRNA"
FT                   /country="Canada"
FT                   /isolation_source="potato"
FT                   /db_xref="taxon:12321"
FT   gene            1..666
FT                   /gene="CP"
FT   CDS             1..666
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q2PP32"
FT                   /db_xref="InterPro:IPR002681"
FT                   /db_xref="UniProtKB/TrEMBL:Q2PP32"
FT                   /protein_id="ABC47122.1"
FT                   /translation="MSSSQKKAGGKAGKPTKRSQNYAALRKAQLPKPPALKVPVAKPTN
FT                   TILPQTGCVWQSLGTPLSLSSFNGLGVRFLYSFLKDFAGPRILEEDLIYRMVFSITPSH
FT                   AGTFCLTDDVTTEDGRAVAHGNPMQEFPQGAFHANEKFGFELVFTAPTHAGMQNQNFKH
FT                   SYAVALCLDFDAHAEGSKNPSYRFNEVWVERKAFPRAGALRSLITVGLLDEADDLDRD"
XX
SQ   Sequence 666 BP; 158 A; 167 C; 175 G; 166 T; 0 other;
     atgagttctt cacaaaagaa agctggtggg aaagctggta aacctactaa acgttctcag        60
     aactatgctg ctttacgcaa agctcaactg ccgaagcctc cggcgttgaa agtcccggtt       120
     gcaaaaccga cgaatactat actgccacag acgggctgtg tgtggcaaag cctcgggacc       180
     cctctgagtc tgagctcttt caacgggctc ggcgtgagat tcctctacag ttttctgaag       240
     gatttcgcgg gacctcggat cctcgaagag gatctgattt acaggatggt gttttctata       300
     acaccgtccc atgccggcac cttttgtctc actgatgacg tgacgactga ggatggtagg       360
     gccgttgcgc atggtaatcc catgcaagaa tttcctcaag gcgcgtttca cgccaatgag       420
     aagttcgggt ttgagttggt cttcacagct cctacccatg cgggaatgca aaatcaaaat       480
     ttcaagcatt cctatgccgt agccctctgt ttggacttcg atgcgcacgc tgagggatct       540
     aaaaatccct cataccgatt caacgaagtt tgggtcgaga gaaaggcgtt cccgcgagca       600
     ggggccctcc gcagtttgat tactgtgggg ctgctcgacg aagctgacga tcttgatcgt       660
     gattga                                                                  666
//