ID DQ113897; SV 1; linear; genomic RNA; STD; VRL; 3538 BP. XX AC DQ113897; XX DT 15-AUG-2005 (Rel. 84, Created) DT 20-SEP-2008 (Rel. 97, Last updated, Version 3) XX DE Adult diarrheal rotavirus strain J19 VP1 gene, complete cds. XX KW . XX OS Adult diarrheal rotavirus strain J19 OC Viruses; Riboviria; Reoviridae; Sedoreovirinae; Rotavirus. XX RN [1] RP 1-3538 RX DOI; 10.1099/vir.0.2008/001933-0. RX PUBMED; 18796732. RA Jiang S., Ji S., Tang Q., Cui X., Yang H., Kan B., Gao S.; RT "Molecular characterization of a novel adult diarrhoea rotavirus strain J19 RT isolated in China and its significance for the evolution and origin of RT group B rotaviruses"; RL J. Gen. Virol. 89(Pt 10):2622-2629(2008). XX RN [2] RP 1-3538 RA Ji S.Z., Jiang S.J., Yang H.Y.; RT "Complete genomic sequence of a novel adult diarrhea rotavirus strain J19 RT related to the evolution and origin of group B rotaviruses"; RL Unpublished. XX RN [3] RP 1-3538 RA Ji S.Z., Jiang S.J., Yang H.Y.; RT ; RL Submitted (30-JUN-2005) to the INSDC. RL Department of Diarrhea Disease, National Institute for Communicable Disease RL Control and Prevention, Chinese Center for Disease Control and Prevention, RL P.O.Box 5, Changping, Beijing 102206, People's Republic of China XX DR MD5; 95cd7805932fe6c673ceed795893528d. DR EuropePMC; PMC2687386; 19357162. XX FH Key Location/Qualifiers FH FT source 1..3538 FT /organism="Adult diarrheal rotavirus strain J19" FT /strain="J19" FT /mol_type="genomic RNA" FT /db_xref="taxon:335103" FT CDS 7..3510 FT /codon_start=1 FT /product="VP1" FT /note="RNA polymerase" FT /db_xref="GOA:Q45UG0" FT /db_xref="InterPro:IPR001795" FT /db_xref="InterPro:IPR007097" FT /db_xref="UniProtKB/Swiss-Prot:Q45UG0" FT /protein_id="AAZ03485.1" FT /translation="MEPENYLAWLARDIVRNLSYTSLVYNNPKVAIVELLDNKEAFFAY FT EKEQKTPEALINYIDSIVKSSISVEDKIEALLKIRYISVYVDDKSDKRDIVLQLLNRTI FT KKIELKTKISDELNDAINAITIESKNWKIQNSKSFKPYHYNQLVSDFIKYNEFEVLEGT FT DPLKWKSDTLQGLSPNYNHRTHTLISSIIYATSVRFDNYNDEQLQVLLYLFSVIRTNYV FT NGYLEILPNRKWSHSLADLRENKSIMMYSAKIIHASCAMISILHAVPIDYFFLAQIIAS FT FSEIPAHAAKHLSSPMTLYIGIAQLRSNIVVSTKIAAESVATESPNISRLEESQIREWE FT QEMSEYPFQSSRMVRMMKKNIFDVSVDMFYAIFNCFSATFHVGHRIDNPQDAIEAQVKV FT EYTSDVDKEMYDQYYFLLKRMLTDQLAEYAEEMYFKYNSDVTAESLAAMANSSNGYSRS FT VTFLDREIKTTKKMLHLDDDLSKNLNFTNIGDQIKKGIPMGTRNVPARQTRGIFILSWQ FT VAAIQHTIAEFLYKKAKKGGFGATFAEAYVAKAATLTYGILAEATSKADQLILYTDVSQ FT WDASQHNTEPYRSAWINAIKEARTKYKINYNQEPVVLGMNVLDKMIEIQEALLNSNLIV FT ESQGSKRQPLRIKYHGVASGEKTTKIGNSFANVALITTVFNNLTNTMPSIRVNHMRVDG FT DDNVVTMYTANRIDEVQENIKEKYKRMNAKVKALASYTGLEMAKRFIICGKIFERGAIS FT IFTAERPYGTDLSVQSTTGSLIYSAAVNAYRGFGDNYLNFMTDVLVPPSASVKITGRLR FT SLLSPVTLYSTGPLSFEITPYGLGGRMRLFSLSKENMELYKILTSSLAISVQPDEIKKY FT SSTPQFKARVDRMISSVQIAMKSEAKIITSILRDKEEQKTLGVPNVATTKNRQQIEKAR FT KTLSLPKETLPKVTKYYPEEIFHLILRNSTFTIPKLNTMTKVYMNNSANITKLQQQLGV FT RVSSGIQVHRPVNTLLKLVEKHSPIKISPSDLVLYSKKYDLTNLNGKKQFLIDLGISGN FT ELRFYLNSKLLFHDLLLSKYDKLYESPGFGATQLNALPLDLTAAEKVFSIKLNLPNTYY FT ELLMLILLYEYVNFVMFTGDTFRAVCIPESQTINAKLVKTVMTMIDNIQLDTVMFSDNI FT Y" XX SQ Sequence 3538 BP; 1320 A; 574 C; 587 G; 1057 T; 0 other; ggcactatgg aacctgagaa ctatctagct tggctagcta gagatatagt tcgaaattta 60 tcatatactt ctctcgttta taataatcca aaagtcgcaa ttgtagagtt actggataat 120 aaagaagcgt tctttgctta tgaaaaagag caaaaaacac ctgaagcact aattaattat 180 attgactcta tagttaaatc ctctatatca gtagaagata aaattgaagc attgttgaaa 240 attcgatata tttcggtata cgttgatgat aaatctgaca aaagagatat agtattgcag 300 cttttgaatc gtactattaa aaaaatagaa ttaaaaacta aaatatctga tgaattgaat 360 gatgcaatta atgctataac gattgaatcg aaaaattgga agattcaaaa ttcaaagtca 420 tttaaaccat atcattataa ccagttagtg tcagacttta taaagtataa cgagtttgag 480 gtacttgaag gtacggatcc tttaaaatgg aaaagtgata ctttacaagg attgagtcca 540 aactacaatc ataggacaca tactttgatt tcatcaatta tatatgcgac aagcgttagg 600 tttgataatt ataatgatga acaattacaa gtattattat atttatttag tgtaattaga 660 actaattatg tgaatggtta tcttgaaatt ctaccaaata ggaaatggtc acattcatta 720 gctgatctac gagaaaataa atcaataatg atgtattctg ctaaaattat acatgcttct 780 tgtgcgatga tttcaatatt gcatgctgtt ccaatcgact actttttcct tgcacaaatc 840 atcgcgtcat tttccgaaat acccgcccat gctgctaaac atctttcttc tccgatgact 900 ttatacattg gaattgcaca gcttcgttct aatattgttg tatcaactaa aatcgcggct 960 gaaagtgttg caacagaaag cccgaatatt tctagattag aagaaagcca aatacgtgaa 1020 tgggagcaag agatgagtga atatccattt caatcttcta ggatggtaag aatgatgaaa 1080 aaaaatatat ttgacgtttc tgttgatatg ttttatgcaa tttttaattg cttttcagcc 1140 acattccacg ttggccatag aatagacaat ccacaagatg ctattgaagc ccaagttaaa 1200 gttgaatata catctgatgt agataaagaa atgtatgatc aatattattt tctcttaaaa 1260 cgaatgttaa ctgaccaact tgccgaatat gctgaagaaa tgtatttcaa atataactct 1320 gacgttacag ctgaatcttt agcggcaatg gcaaattcat caaatggtta ttcaagatct 1380 gtcactttcc ttgacagaga aattaaaact acaaagaaga tgttgcattt ggatgacgat 1440 ttatcaaaga atcttaattt cacaaatatt ggtgaccaga taaaaaaggg tattccaatg 1500 ggaacaagaa atgtaccagc gagacaaact agaggtatat ttatactaag ctggcaagtc 1560 gctgcaatac aacacaccat tgccgagttt ttatacaaaa aagctaaaaa aggtggtttt 1620 ggtgctactt ttgcggaagc ctacgtagcc aaagctgcta cattgactta tggaattcta 1680 gctgaggcaa cgtcaaaagc agatcaatta attttatata ctgatgtatc ccaatgggac 1740 gcctcgcaac ataacactga gccttatcgt tcagcttgga ttaatgcaat taaagaagct 1800 agaactaaat ataaaataaa ttacaatcaa gaacctgtcg ttcttggaat gaatgtgttg 1860 gataaaatga ttgaaatcca agaagcactt ttaaattcaa atttaatagt tgagtcacaa 1920 ggatcaaaaa gacagccatt gcgcatcaaa tatcatggtg tggcctcagg tgagaaaaca 1980 acaaagatag gaaattcatt tgccaatgta gctttaataa ctacggtatt caataatcta 2040 acgaatacta tgccttctat aagagttaat catatgagag ttgacggtga cgataatgtt 2100 gtaactatgt acacagctaa tagaatagat gaagtccaag aaaatataaa agaaaaatac 2160 aaacgcatga atgcgaaagt taaggcttta gcatcatata caggattaga aatggctaaa 2220 agatttatta tatgtggtaa aatatttgaa agaggtgcta tatcaatatt cactgcagaa 2280 cgtccatatg ggactgattt atcagttcaa tctaccacgg gttcattaat ttattcagca 2340 gcagtaaacg catatcgagg atttggtgat aactatttga attttatgac tgatgtacta 2400 gtgccaccat cagcttcagt aaaaataaca ggcagactga ggtccctgtt gtcaccagtt 2460 acactatact ccaccggacc attatccttt gaaataacac catatggatt aggaggtagg 2520 atgagactgt tttcgttatc taaagagaat atggagttat ataagatttt aacatcctcc 2580 ctcgcaatat cagttcaacc tgatgaaata aaaaaatatt catctactcc acagtttaaa 2640 gcaagagttg atagaatgat atcatcagtg caaatagcaa tgaaatcaga agcaaaaatt 2700 ataacgtcta tattgagaga taaagaagag cagaaaacct taggtgttcc gaatgttgca 2760 acaacaaaga acagacaaca aattgaaaaa gctagaaaaa ctctgtcttt accaaaagaa 2820 acattaccga aagtaacaaa atattatcca gaagaaatat ttcatctgat attacgtaac 2880 tcaaccttta ccattcccaa gttaaatact atgacaaaag tttacatgaa taattctgca 2940 aatataacaa aattgcaaca acagctcgga gtcagagtat cttcaggaat acaggtgcac 3000 aggccagtta ataccttact aaaattagtt gagaagcatt caccaatcaa aatatcacca 3060 tctgatctag tattgtattc aaagaaatac gatctaacaa acttaaatgg aaaaaaacaa 3120 tttctaatag acttaggtat atcaggcaat gaactacgat tttatttaaa ctcaaaacta 3180 ctctttcatg acttgttact ctcaaaatat gataaattgt atgaatctcc cggttttggt 3240 gcaacacaat taaatgcgct accattagat ttaacggcag cagaaaaagt tttctctatt 3300 aaactaaatt taccaaatac atactatgaa ctcttaatgt taatattgtt atatgagtac 3360 gtcaattttg tcatgttcac tggcgatact ttcagagcgg tgtgcattcc agaatcacaa 3420 actataaacg caaaattagt caaaacggtc atgaccatga ttgataacat tcagttagac 3480 acagttatgt tttctgataa catatattaa acgtgagagt acatccatta atataccc 3538 //