ID D90033; SV 1; linear; genomic RNA; STD; VRL; 2570 BP. XX AC D90033; X16017; XX DT 09-MAY-1992 (Rel. 31, Created) DT 07-DEC-2007 (Rel. 94, Last updated, Version 8) XX DE Rice dwarf virus A segment 5 ORF gene, complete cds. XX KW . XX OS Rice dwarf virus OC Viruses; Riboviria; Reoviridae; Sedoreovirinae; Phytoreovirus. XX RN [1] RP 19-2570 RX DOI; 10.1093/nar/17.21.8858. RX PUBMED; 2587221. RA Suzuki N., Watanabe Y., Kusano T., Kitagawa Y.; RT "Nucleotide sequence of rice dwarf virus segment 5"; RL Nucleic Acids Res. 17(21):8858-8858(1989). XX RN [2] RP 1-2570 RX DOI; 10.1016/0042-6822(90)90313-G. RX PUBMED; 2219732. RA Suzuki N., Watanabe Y., Kusano T., Kitagawa Y.; RT "Sequence analysis of rice dwarf phytoreovirus genome segments S4, S5, and RT S6: comparison with the equivalent wound tumor virus segments"; RL Virology 179(1):446-454(1990). XX DR MD5; 20cea8fe8864c5a89978d9d304a5c677. XX CC These data kindly submitted in computer readable form by: CC Nobuhiro Suzuki CC Biotechnology Institute CC Akita Prefectural College of Agriculture CC Ohgata CC Minami-Akita-Gun, Akita CC 010-04 CC Japan XX FH Key Location/Qualifiers FH FT source 1..2570 FT /organism="Rice dwarf virus" FT /mol_type="genomic RNA" FT /clone="5RD" FT /db_xref="taxon:10991" FT misc_feature 1..6 FT /note="consensus sequence in rice dwarf virus" FT CDS 27..2432 FT /codon_start=1 FT /product="ORF" FT /db_xref="GOA:P14583" FT /db_xref="PDB:5X6X" FT /db_xref="PDB:5X6Y" FT /db_xref="PDB:5X6Z" FT /db_xref="PDB:5X70" FT /db_xref="PDB:5X71" FT /db_xref="UniProtKB/Swiss-Prot:P14583" FT /protein_id="BAA14081.1" FT /translation="MSNPDYCIPNFSQTVNERTIIDIFTICRYRSPLVVFCLSHNELAK FT KYAQDVSMSSGTHVHIIDGSVEITASLYRTFRTIATQLLGRMQIVVFVTVDKSVVSTQV FT MKSIAWAFRGSFVELRNQSVDSSTLVSKLENLVSFAPLYNVPKCGPDYYGPTVYSELLS FT LATNARTHWYATIDYSMFTRSVLTGFIAKYFNEEAVPIDKRIVSIVGYNPPYVWTCLRH FT GIRPTYIEKSLPNPGGKGPFGLILPVINELVLKSKVKYVMHNPQIKLLCLDTFMLSTSM FT NILYIGAYPATHLLSLQLNGWTILAFDPKITSDWTDAMAKATGAKVIGVNKEFDFKSFS FT VQANQLNMFQNSKLSVIDDTWVETDYEKFQAEKQAYFEWLIDRTSIDVRLISMKWNRSK FT DTSVSHLLALLPQPYGASIREMRAFFHKKGASDIKILAAETEKYMDDFTAMSVSDQINT FT QKFMHCMITTVGDALKMDLDGGRAVIASYSLSNSSNPKERVLKFLSDANKAKAMVVFGA FT PNTHRLAYAKKVGLVLDSAIKMSKDLITFSNPTGRRWRDYGYSQSELYDAGYVEITIDQ FT MVAYSSDVYNGVGYFANSTYNDLFSWYIPKWYVHKRMLMQDIRLSPAALVKCFTTLIRN FT ICYVPHETYYRFRGILVDKYLRSKNVDPSQYSIVGSGSKTFTVLNHFEVPHECGPLVFE FT ASTDVNISGHLLSLAIAAHFVASPMILWAEQMKYMAVDRMLPPNLDKSLFFDNKVTPSG FT ALQRWHSREEVLLAAEICESYAAMMLNNKHSPDIIGTLKSAINLVFKI" FT misc_feature 2567..2570 FT /note="consensus sequence in rice dwarf virus" XX SQ Sequence 2570 BP; 692 A; 507 C; 579 G; 792 T; 0 other; ggcaaaagct ccgaaggcga cgaaaaatgt cgaacccgga ctattgcata cctaatttct 60 ctcaaacggt gaatgagaga acgataattg atatatttac gatttgcagg taccgttcac 120 ctctagtggt attctgcctt agccacaatg aactggctaa gaaatatgct caagatgttt 180 ccatgagtag tggaactcac gtccatatca ttgatggaag tgtggaaatt actgcttctt 240 tatataggac atttcgtact attgcaaccc aactgcttgg aaggatgcaa atagtcgtat 300 ttgtcaccgt ggataagtct gtcgtatcca cgcaagtaat gaaaagtatt gcctgggctt 360 ttcggggctc atttgtcgaa ctccggaatc agtcggttga ttcgtcaacc ttggtaagta 420 agcttgagaa cttggtatcg tttgctcctt tgtataacgt gcccaaatgt ggtccagatt 480 attatggtcc cactgtatac tctgaactat tatccttggc tacaaatgct cgcactcatt 540 ggtatgccac cattgattat tctatgttta ccaggtctgt tttaactggt ttcatagcta 600 aatatttcaa tgaagaagct gtacccatag ataaaaggat tgtgtcaatt gttggctaca 660 atccgcctta tgtctggacg tgtctacgcc acggaattcg tccaacatat attgagaaat 720 cgctcccgaa tccgggtgga aaaggtccct ttggacttat cttacccgta atcaacgagc 780 tggtgttaaa gagtaaggtg aagtatgtaa tgcataatcc ccaaatcaag cttttgtgtt 840 tggatacatt tatgctgtct acttcgatga atattttata cattggtgcc tatccagcta 900 ctcatctatt aagcttacag cttaatgggt ggacgattct ggcgtttgat cctaagataa 960 ctagcgattg gactgatgcc atggcgaaag ctacaggtgc taaggtgatt ggcgtgaaca 1020 aagaatttga ttttaagtct ttctctgttc aagctaacca actgaatatg tttcagaatt 1080 cgaagttatc agttattgat gacacatggg ttgagacgga ctatgagaag tttcaagccg 1140 agaagcaagc ttattttgaa tggctaattg ataggacgtc aatcgacgtt cgtttaattt 1200 ctatgaagtg gaacaggagt aaagatactt cggtgtctca tcttcttgca cttctcccac 1260 agccttacgg tgctagtatc cgtgagatga gggcattctt tcacaagaaa ggagccagcg 1320 atataaaaat tctggctgct gagacggaaa aatacatgga cgattttacg gctatgtctg 1380 tttcggatca gatcaatacg caaaaattta tgcattgcat gatcactacg gttggcgatg 1440 ctttgaaaat ggatttggat ggtggcagag ctgtcattgc atcctattca ttatcaaatt 1500 cttcaaaccc gaaagaacgc gtgcttaagt ttttaagtga cgctaataag gctaaagcca 1560 tggtggtatt tggggcacct aatacgcatc ggctggccta tgctaaaaag gttggtttag 1620 tcttagacag tgcgattaaa atgtctaagg acctaatcac cttttcaaat ccaacggggc 1680 gtcgttggag ggactacgga tatagtcaat cagagttgta tgacgctgga tatgttgaga 1740 taaccattga tcaaatggtt gcttactctt cagatgttta caacggggtt ggttatttcg 1800 ctaattcaac ttataatgat ttattctcat ggtacattcc taaatggtat gtgcacaaga 1860 ggatgctgat gcaggacatt cgtctttcac cagccgcatt agttaaatgc ttcactactc 1920 taatacgtaa tatatgttac gtaccacacg aaacatatta tcgttttaga gggatacttg 1980 ttgacaagta tctaagatct aagaatgttg atccatctca atactctatc gttgggagtg 2040 gatcaaagac tttcacagtg ctcaatcact ttgaagtccc tcatgaatgt gggccattgg 2100 tatttgaggc gtctactgac gtgaacatat cagggcatct actttcgttg gccattgctg 2160 ctcactttgt cgcatcaccc atgattctgt gggctgaaca gatgaagtat atggctgttg 2220 atcgtatgtt gccgcccaat cttgacaaat ctcttttctt cgacaataag gttacgcctt 2280 ccggtgctct tcagaggtgg cactctcgcg aggaggtctt attggcagcg gagatatgcg 2340 agtcttatgc ggccatgatg ttgaataaca agcattcacc tgacatcatt ggtacgctta 2400 agtcagctat aaatttggta ttcaaaatct gatgttctgc agctatggat ctggtataca 2460 tgcccgagga gtcggccgca ctcatgattc ccttgtgtct gtgtgagtag gttcgtgggc 2520 ctctgccagt accatatggg gtagtcgcct tcccagaagc ttgaactgat 2570 //