ID D14996; SV 1; linear; genomic RNA; STD; VRL; 7552 BP. XX AC D14996; XX DT 14-DEC-1993 (Rel. 38, Created) DT 07-JUL-2003 (Rel. 76, Last updated, Version 7) XX DE Apple chlorotic leaf spot virus genomic RNA, complete genome. XX KW . XX OS Apple chlorotic leaf spot virus OC Viruses; Riboviria; Tymovirales; Betaflexiviridae; Trivirinae; Trichovirus. XX RN [1] RP 1-7552 RA Yoshikawa N.; RT ; RL Submitted (14-APR-1993) to the INSDC. RL Nobuyuki Yoshikawa, Iwate University, Bioscience and Technology; Ueda RL 3-18-8, Morioka, Iwate 020, Japan (Tel:81-196-23-5171(ex.2516), RL Fax:81-196-25-7667) XX RN [2] RP 1-7552 RX PUBMED; 8376968. RA Sato K., Yoshikawa N., Takahashi T.; RT "Complete nucleotide sequence of the genome of an apple isolate of apple RT chlorotic leaf spot virus"; RL J. Gen. Virol. 74:1927-1931(1993). XX DR MD5; fc83520fdc4055d48647c21d6d853915. DR EuropePMC; PMC3220667; 22040379. DR EuropePMC; PMC4982687; 27519059. XX FH Key Location/Qualifiers FH FT source 1..7552 FT /organism="Apple chlorotic leaf spot virus" FT /isolate="P-205" FT /mol_type="genomic RNA" FT /db_xref="taxon:12175" FT CDS 152..5809 FT /codon_start=1 FT /product="216.5K protein" FT /db_xref="GOA:P54891" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR005123" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR008744" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="InterPro:IPR037151" FT /db_xref="UniProtKB/Swiss-Prot:P54891" FT /protein_id="BAA03641.1" FT /translation="MAFSYRTPQEELLSRLPQSQQEAISGFQYERFQKEEEKKVENFSF FT YLPEKTREWFTKSGVYLSPFAYVNHSHPGCKTLENHLLFNVVASYISKYSYVACLSIKS FT NKMSKMERLGSNSVKTYDILNRLVTAKDKARYGPLARPERSPCPKKTNIFIHDEIHYWS FT RDQLETFLQVHRPKNLWATLVFPPEILAGYKSSVLPFLYQFEIHGKDLVYMPDGVRSES FT YTQPLENGFLLSSSSILVRNKATGVEIRYQVSLVYSLGSHHLFHIYPTEDLMKEEVRRF FT GPYDLFDVGSLFVKPVRVPIQDFPLSVFKKIFIYLSSLKKPDVQSAVAKLRQLSDADIS FT IESVFMVQEFASRVEKNGVGSWSCSFWECMKDWFFDKLPYREVLEKIGLANDFTRRLMK FT IKPLAFDIHTTDRPLTVRMVIDQIWGERQSSCDDVPNIIFYGRKEWLEHGLLPKVKKGL FT AKLVPGRETGGSDYPEEIYSDLLSSTSIWRSYDENLRHRKASPIVILKSEKAYSEAPGF FT SSNCISLCSTPFGEVIERTPFEVERERKKRELSFGCLDFHIRKMKVKDASELSIKLDEQ FT NKEGLRRQKRKEKAKKTRMIPVHLLELGSDQKEKNLGQEASKGKGIEQEERRKSDEAKF FT DSGPSGVCSIKAENPVDAQHIAEPVPCLKLNDLIGKEKICSSGLIKTVGNDYLTLARQI FT EDMPLAQLKNRKAAYFCIDYPMVYFHDKISYPTFEATGEIKQIIMRARDKWGANFNSAL FT IQVYNDGCRLPLHSDNEECYDDDEILTINVVGDAKFHTTCHGEIIDLRQGDEILMPGGY FT QKMNKHAVEVASEGRTSVTLRVHKRDFSFESKLRFIKGKFDCLFVSIAEIIHKKPEEVM FT MFIPHIVDRCVSNRGCSLDDARAICEKYEIKIECEGDCGLVECGTIGLSVGRMLLRGNH FT FTVASVRRSSMDSLANSSKELKSNGVLDHVMFNFHKRLRSVEPDLTVEEIKVDSSRAGK FT LLKSLMDGMTGIVSHNSTHEGWRMIKGINSTSEMRSFMSMIKGKSEETRGDLFDRVQEL FT NFMKVKIYGIFGFAGSGKSHAIQNLIQTEFKGSQGVMVICPRRFLAKDWSEKGVDEKDI FT KTFESALKSDVKGKRLFILDEISLLPKGFTDLLMLKMHMEGILKKSTIVCIGDPLQAGY FT FCPKDDNYLSREGEIKRLFKDGVNYKWYSYRINKFIAKKLAIETMNDFIGIDEQNLIYK FT DMPSAHHFMENKGNHIEVILVPSMIEKELYSNYGNVMTFGESQGLTFNCGVIVLSEEAK FT LCSDAHIMVAITRFRRGFCFALGSKGSKEDYMRSMKSGLLQRMCSGIGASKEFILGSSS FT VKLILSEKDVSKGAGVDEMDREARLEGDVWLKSMIYLGKRYHIVEPLGQVIKLTENAIK FT CHIPVCSSQTLGPELDNIQAREFREFKGKNGWSNQFREEAGPNWKHPYRVNQAMSYEAI FT YPRHRMDDDLTFLAAIKKRLRFDNVANNYAKFKAAESRGKYLAKVFLRHVPIKCGRDQR FT LLDQCRQEFEETKLSKSAATIGAHSQRSDSDWPLDKIFLFMKSQLCTKFEKRFTEAKAG FT QTLACFPHKILVEFSPWCRYTEKVLTANLPDNYYIHQRKNFSELEDFAKRFSNGSMCVE FT SDYTAFDVSQDHTILAFEVELLKHFGWDDKVLQSYIKMKCTLGCRLGGFAIMRFTGEFS FT TFLFNTLANMVFTFCRYEVPDGTPICFAGDDMCALRNLREIDTHECILSKLSLKAKVNR FT TKVPMFCGWRLCFDGLIKEPCLIYERLQVAIENGRLMDVIDSYFLEFSFAYKLGERLYS FT HLEIEQLNYHQVLTRFFIRNKHLLRGDSRHNISELEWLSDEDSDDDKGSQIEDRRRGYS FT NCWGEKLQNLF" FT CDS 5727..7100 FT /codon_start=1 FT /product="50.4K protein" FT /db_xref="GOA:P54892" FT /db_xref="InterPro:IPR001815" FT /db_xref="InterPro:IPR028919" FT /db_xref="UniProtKB/Swiss-Prot:P54892" FT /protein_id="BAA03642.1" FT /translation="MMIRGHKLKIAEGDIPIAGVKSSRIYSDVSPFRKASDLMIHWNEF FT VFKVMPEDIAGDGFRLASIPVIPSSEVQAVLRKRESTNYVHWGALSISIDALFRKNAGV FT SGWCYVYDNRWETFEQAMLQKFRFNLDSGSATLVTSPNFPVSLDDPGLSNSISVAVMFE FT NLNFKLESYPISVRVGNMCRFFDSFLSCVKNKVDSNFLLEAANADPLGAGAFGFEQDDQ FT VSELFNYIQTVPTQAIKSREHEVPRGLFGMMGKKKVKSFEFASGSRNLGRRKPQRGRPL FT ERSASLRVAPGFRSQDERVEHQGLSTDSDFENFLRKGKGKAGTESITSEGSSFDNISAR FT EFQFARQDQKAKDGGSAEPPIKSGRRSESVPGRRRQTPSWKDRGNSGTDTGGHLREHSD FT TGDLGTNRVPGRAGGGEIHGGSEGGGVIQSEGGSRFDQNIQDYIFGPEYKQHDLPPSV" FT CDS 6784..7365 FT /codon_start=1 FT /product="coat protein" FT /note="21.4K protein" FT /db_xref="GOA:P54890" FT /db_xref="InterPro:IPR008879" FT /db_xref="UniProtKB/Swiss-Prot:P54890" FT /protein_id="BAA03643.1" FT /translation="MAAVLNLQLKVDADLKAFLAAEGRPLHGKTGAILEQTLEAIFANI FT AIQGTSEQTEFLDVLVEVKSMEDQKVVGSFNLKEVVGLIKIFRTTSSDPNISSMTFRQV FT CEAFAPEARNGLVKLKYKGVFTNLFSTTPEVGGKYPELMFDFNKGLNMFIMNKAQQKVI FT TNMNRRLLQTEFAKSENEAKMSSVTTDLCV" FT polyA_site 7552 XX SQ Sequence 7552 BP; 2297 A; 1314 C; 1885 G; 2056 T; 0 other; tgatactgat acagtgtaca ctcacgtcgt gagtaaacag attgacgtaa cgcctcaatc 60 gtggtcaagg accagcattt taatgctaca acgttaaata caatcccatt gtattcaaga 120 actttccgtt taactacgtg aaaggttaca aatggctttc tcttatagaa cgccacagga 180 agaacttctg agcaggttac ctcagtctca gcaggaagcg atcagcggat ttcagtacga 240 gcgatttcaa aaggaggaag agaagaaggt ggaaaacttc tctttttacc taccggagaa 300 gaccagggag tggttcacta agtcaggtgt atatctctca ccctttgctt atgtcaatca 360 ttctcaccct ggttgcaaaa ctctggagaa ccacctttta tttaatgttg tagctagtta 420 tattagtaag tattcttatg tagcttgtct tagtattaag tcgaataaaa tgagcaagat 480 ggaacgtttg ggttccaatt cagtcaaaac ctatgacatt ttgaacagat tagttactgc 540 taaggacaag gctcgatatg gacctttggc caggcctgag cggtctccat gtccaaagaa 600 aacaaacatt ttcattcatg atgagatcca ttattggtca agggatcaac ttgagacatt 660 ccttcaggtt cacagaccca aaaatttgtg ggcgactctt gtttttcccc ctgagatctt 720 ggctggttat aagtcgtcag ttttaccatt tctttaccag tttgagattc atggaaaaga 780 tttggtttac atgcctgatg gagttagatc agagagttac actcaacctc ttgagaatgg 840 atttcttctg agttcaagca gtatacttgt gagaaacaag gctactggag ttgaaattag 900 atatcaggtt agtcttgtgt attctctggg ttctcaccat ttgttccaca tttaccccac 960 ggaggacctg atgaaagaag aggtgagaag gtttggacct tatgatttgt tcgatgtggg 1020 ttcattattt gtcaagccag tgcgcgtccc tatccaagac ttccctttga gtgtcttcaa 1080 aaagatattc atttatctta gttcattaaa gaagcctgat gttcagtctg cagtggccaa 1140 actcagacag ttatccgatg ccgacatttc cattgagagt gttttcatgg tgcaggagtt 1200 tgcaagtagg gtggaaaaaa atggagtcgg aagttggtcc tgctcatttt gggagtgcat 1260 gaaggactgg ttttttgata agctgccata cagagaggtg ctggaaaaaa ttggattggc 1320 gaatgacttt accaggcgtt tgatgaaaat caaaccattg gctttcgata tccacacaac 1380 agacagacca ctcacagtca ggatggtcat agaccagatt tggggagaga ggcaaagctc 1440 ttgtgatgat gttccaaata ttatatttta tggaaggaag gaatggcttg agcatgggct 1500 attgcctaag gtgaagaaag gcttagccaa attggttcca ggaagggaga ctggtggaag 1560 tgattaccca gaagaaatct attctgattt gctgtcatcc acctcaattt ggaggtctta 1620 tgatgagaat ctaaggcaca ggaaagccag tcctattgtg atacttaagt ccgaaaaggc 1680 atactctgag gcccctgggt tcagctcaaa ctgtatcagc ctgtgttcta cgccttttgg 1740 tgaggttatt gaaaggaccc cttttgaggt ggaaagggaa aggaagaaaa gagagttgtc 1800 ttttggttgt cttgattttc acattagaaa gatgaaggtt aaagatgctt ctgaactttc 1860 catcaagttg gatgagcaga ataaagaagg tttgaggagg cagaaaagaa aggagaaggc 1920 gaagaaaaca aggatgattc ctgtgcatct gctagaatta ggttcagatc aaaaggaaaa 1980 gaatttgggg caggaggctt ccaaaggaaa aggaattgaa caggaagaga ggaggaaaag 2040 tgatgaagca aagtttgatt ctgggccctc gggagtttgc agcataaaag cggaaaatcc 2100 tgttgatgca caacacattg ctgagcccgt gccatgtttg aaattgaatg atctgattgg 2160 caaagagaaa atctgttctt ctggtcttat caaaacagtt ggaaatgatt atctcacttt 2220 ggccaggcag atagaggata tgcccctcgc ccagttgaag aacaggaaag cagcatattt 2280 ctgcattgac taccctatgg tgtactttca tgacaagatt tcatacccaa cttttgaagc 2340 tactggtgag atcaaacaaa tcatcatgag agcaagagac aaatggggtg caaatttcaa 2400 cagtgctcta attcaggtct ataatgacgg gtgcaggtta cctttgcata gcgataatga 2460 ggagtgctat gatgatgatg agatactcac gatcaatgtt gtcggtgatg caaaatttca 2520 cacaacctgt catggtgaaa tcatagatct gaggcagggt gatgaaatac tgatgcccgg 2580 gggttaccag aagatgaaca agcatgctgt ggaagtggca tcggaagggc gaactagtgt 2640 tactttgaga gtgcacaaaa gggacttcag ctttgagtca aaactcaggt tcattaaagg 2700 aaaatttgat tgcttgtttg tcagcatcgc ggaaataata cacaaaaaac cagaagaggt 2760 gatgatgttt atcccacata ttgtggacag atgtgtgagc aataggggtt gctcacttga 2820 tgacgcaaga gcaatatgtg agaaatatga gatcaagata gaatgtgaag gggactgtgg 2880 cctagttgag tgtggaacaa ttggtctgtc tgttgggagg atgctcctca gagggaatca 2940 ttttacagtg gcttcggtaa gaagatcatc catggactcc cttgccaatt catcaaaaga 3000 actcaaatca aatggagtct tggatcatgt aatgtttaat tttcataaaa gacttagatc 3060 cgtggaacct gatctgactg tagaggaaat caaagtggat tcttcaagag cggggaagtt 3120 gctcaaaagt ttgatggatg gaatgacagg aatagtttcc cacaactcaa ctcatgaggg 3180 gtggagaatg atcaaaggca taaatagcac ctccgagatg agatcattca tgagtatgat 3240 caaaggtaaa agtgaagaga ccaggggtga cttatttgac agagttcagg aactgaactt 3300 catgaaggtt aagatctacg gcatatttgg gtttgctgga tcagggaaga gtcatgcaat 3360 tcaaaatctc attcagacag aattcaaagg atcacaaggt gttatggtga tctgtccaag 3420 aaggtttttg gccaaggact ggagtgaaaa aggggtggat gagaaggata ttaaaacctt 3480 tgagagcgca ctgaagtcag atgttaaagg aaagagatta ttcatacttg atgaaatcag 3540 tttgttgcct aaaggtttca ctgacctctt gatgctcaaa atgcatatgg aagggattct 3600 gaaaaagtca acaattgtgt gtattggtga ccctctgcaa gctgggtact tctgtcctaa 3660 ggatgacaat tatttgtcta gggagggaga aatcaagagg cttttcaaag atggggtcaa 3720 ttacaaatgg tacagctaca ggattaataa gtttattgca aagaagctgg ccatagagac 3780 aatgaatgac tttattggca ttgatgagca gaatttaata tacaaagata tgccatctgc 3840 tcaccatttc atggagaaca aagggaatca cattgaagtg attctcgttc ccagcatgat 3900 agagaaagag ttatactcga attacggcaa tgtgatgact tttggcgagt cacagggtct 3960 tactttcaac tgtggggtca tagtgctgtc cgaagaggcc aagctatgct ccgatgctca 4020 tataatggtg gcgatcacaa gatttaggcg aggtttctgc tttgcacttg gcagtaaagg 4080 gtcaaaggag gattacatga gatccatgaa aagtggattg cttcaaagga tgtgctccgg 4140 gattggtgct tctaaggaat ttattctagg atcctcttca gtcaaattaa tcctgagtga 4200 aaaggacgtc tcaaagggtg ctggagttga tgaaatggac agagaagcca ggttggaagg 4260 agatgtttgg ctcaagagca tgatatatct tggaaaaagg taccatatag ttgaaccgct 4320 aggtcaagtg atcaagctca ctgagaatgc gatcaagtgc cacattcctg tttgttcaag 4380 ccagactcta ggtcctgagt tggacaacat tcaagcaaga gagttcaggg aattcaaggg 4440 caagaacggg tggtccaatc aattcaggga agaggctggt ccaaattgga agcaccctta 4500 cagagtgaat caggcaatga gttatgaggc tatatatcca aggcacagga tggatgatga 4560 tctaaccttt cttgctgcca tcaagaagag gcttcgtttc gataacgttg ctaataatta 4620 tgcaaagttt aaagcagcag agagtagagg caagtactta gcaaaagttt tcttgcgaca 4680 tgttccaata aagtgtggaa gagatcagag acttcttgat caatgcagac aagagtttga 4740 agagaccaaa ttgtcaaaaa gtgctgcaac cattggagcg cactcacaaa ggtctgactc 4800 tgattggcca ttggacaaaa tctttctttt catgaagtca caattatgca ccaagttcga 4860 gaagaggttc acagaagcca aagcgggtca gactttggcc tgctttccgc ataagatact 4920 tgttgagttc agcccatggt gcaggtacac agagaaagta ctcactgcaa accttccaga 4980 taattattac attcatcaaa ggaagaactt cagtgaactt gaagattttg caaagaggtt 5040 ctcaaatggc tcaatgtgtg tggaatcgga ttacacagct ttcgatgtct cgcaggatca 5100 taccatttta gcctttgaag tggagttgct caagcatttt ggttgggatg acaaggtatt 5160 acagagttac atcaaaatga aatgcaccct aggatgcaga ttgggaggtt ttgccattat 5220 gaggttcact ggagagttct caacattcct gttcaacaca ctcgcaaata tggtatttac 5280 cttttgcagg tatgaagttc cagacggcac tccaatttgc tttgcaggag atgatatgtg 5340 tgccctcagg aacttgagag aaattgacac ccatgaatgc attttgagta agttgagcct 5400 caaagcaaaa gtgaacagaa caaaggtacc gatgttttgt ggatggaggt tgtgtttcga 5460 cggacttata aaggaacctt gtttgattta cgaaagattg caagttgcaa ttgaaaatgg 5520 aaggttgatg gatgtgatag actcatattt tctggaattt tcattcgcct acaaattagg 5580 tgagaggctc tattcacatc ttgaaataga acaactgaat taccatcaag ttttgacaag 5640 attcttcata agaaacaagc atttgttaag gggtgattca aggcacaaca tctcagagct 5700 tgagtggctt tcagacgagg atagcgatga tgataagggg tcacaaattg aagatcgcag 5760 aaggggatat tccaattgct ggggtgaaaa gctccagaat ttattctgat gtgagtcctt 5820 tcaggaaggc ctctgacctt atgattcatt ggaatgaatt cgtattcaag gttatgccag 5880 aggatattgc aggtgatggt tttagattgg catccatacc tgttatacct tcctcagagg 5940 ttcaagcggt gctgagaaag agagagagta ccaactacgt gcattgggga gcactatcaa 6000 tatccattga cgcactgttc agaaagaatg ccggggtttc agggtggtgt tatgtgtacg 6060 acaacagatg ggaaactttt gagcaggcga tgctacaaaa gtttcggttc aacctggata 6120 gtggctcggc cacattggtg acctcaccga attttccagt ttcattggat gatcctggtt 6180 tgtccaattc gatcagtgta gcggtgatgt ttgagaatct gaacttcaag cttgaaagct 6240 accctataag tgttagggta gggaacatgt gtagattctt cgacagcttc ttgagttgcg 6300 tcaagaataa agtggactcc aactttttgc ttgaggccgc taatgcagat ccgcttggcg 6360 cgggtgcttt cgggtttgaa caggacgatc aggtctctga attgttcaat tatattcaga 6420 ctgtcccaac ccaggcaatt aaatccaggg agcatgaagt accgaggggt ttgttcggta 6480 tgatgggaaa aaagaaggtc aaatcttttg agtttgcctc tggttcaaga aatctgggaa 6540 gaagaaaacc gcaacgcgga agacctttgg aaagatctgc tagcctgaga gttgctcctg 6600 gatttaggtc ccaggatgag agagttgaac atcaaggatt atcgactgac tctgattttg 6660 aaaattttct gaggaaaggc aaaggaaaag ctggaactga atccattact tcagaagggt 6720 catccttcga taacatttct gcaagagagt ttcagtttgc tagacaagat cagaaggcga 6780 aggatggcgg cagtgctgaa cctccaatta aaagtggacg cagatctgaa agcgttcctg 6840 gccgcagaag gcagacccct tcatggaaag acaggggcaa ttctggaaca gacactggag 6900 gccatcttcg cgaacatagc gatacagggg acctcggaac aaacagagtt cctggacgtg 6960 ctggtggagg tgaaatccat ggaggatcag aaggtggtgg ggtcattcaa tctgaaggag 7020 gtagtcggtt tgatcaaaat attcaggact acatcttcgg acccgaatat aagcagcatg 7080 accttccgcc aagtgtgtga ggcatttgcc ccggaggcaa gaaatgggct cgtaaagcta 7140 aagtacaaag gggtcttcac aaacctcttt tctactacgc ctgaagtggg ggggaagtat 7200 ccggagctca tgtttgactt caataagggc ctaaatatgt tcataatgaa caaagcccag 7260 cagaaagtga taactaatat gaaccggcgt cttttacaga ctgaatttgc aaagagcgaa 7320 aatgaggcga aaatgtcgtc tgttacaact gatctttgcg tttagtctca taaggaagtt 7380 tggtttaata aataaagtta ataaatagtg tgcatttggt ttaatgtcaa ttgtgtgtat 7440 ttaattaacg tcaaactctt gaacccatga gagagtataa acagtcatgg tatctaattg 7500 gagtgtttag acttataata aatagcctgt agacttttaa atattttact ac 7552 //