ID   AY738101; SV 1; linear; genomic DNA; STD; VRL; 1282 BP.
XX
AC   AY738101;
XX
DT   22-APR-2005 (Rel. 83, Created)
DT   22-APR-2005 (Rel. 83, Last updated, Version 1)
XX
DE   Tomato leaf curl Karnataka virus from India coat protein (AV1) gene,
DE   partial cds; replication associated protein (AC3) and transactivator
DE   protein (AC2) genes, complete cds; and replicase (AC1) gene, partial cds.
XX
KW   .
XX
OS   Tomato leaf curl Karnataka virus
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-1282
RA   Chowda Reddy R.V., Colvin J., Muniyappa V., Seal S.;
RT   "Molecular characterization of tomato leaf curl Karnatka virus in tobacco
RT   at Shimoga, India";
RL   Unpublished.
XX
RN   [2]
RP   1-1282
RA   Chowda Reddy R.V., Colvin J., Muniyappa V., Seal S.;
RT   ;
RL   Submitted (31-AUG-2004) to the INSDC.
RL   Plant Animal and Human Health Group, Natural Resources Institute,
RL   University of Greenwich, Central Avenue, Chatham Maritime, Kent ME4 4TB,
RL   United Kingdom
XX
DR   MD5; 3ac74f259922a63b2facba6cb0275554.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1282
FT                   /organism="Tomato leaf curl Karnataka virus"
FT                   /mol_type="genomic DNA"
FT                   /country="India:Shimoga"
FT                   /note="begomovirus acronym: ToLCKV"
FT                   /db_xref="taxon:220932"
FT   gene            <1..420
FT                   /gene="AV1"
FT   CDS             <1..420
FT                   /codon_start=1
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q534Z4"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:Q534Z4"
FT                   /protein_id="AAW50901.1"
FT                   /translation="GKIWMDENIKTKNHTNSVMFFLVRDRRPTDKPQDFGEVFNMFDNE
FT                   PSTATVKNMHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKYEN
FT                   HTENALMLYMACTHASNPVYATLKIRIYFYDSVSN"
FT   gene            complement(417..821)
FT                   /gene="AC3"
FT   CDS             complement(417..821)
FT                   /codon_start=1
FT                   /gene="AC3"
FT                   /product="replication associated protein"
FT                   /db_xref="GOA:Q534Z3"
FT                   /db_xref="InterPro:IPR000657"
FT                   /db_xref="UniProtKB/TrEMBL:Q534Z3"
FT                   /protein_id="AAW50902.1"
FT                   /translation="MDSRTGELITAAQAENGVFIWEIQNPLYFKITEHHNRPFLMNQDI
FT                   ITVQVQFNHNLRKVLGIHKWFLVYRIWMTSQPPTGRFLRVFKAQVLKYLNNLGVISINN
FT                   VIRAVDHVLWNVLHHVVYVDQTYSIKFNIY"
FT   gene            complement(562..966)
FT                   /gene="AC2"
FT   CDS             complement(562..966)
FT                   /codon_start=1
FT                   /gene="AC2"
FT                   /product="transactivator protein"
FT                   /db_xref="GOA:Q534Z2"
FT                   /db_xref="InterPro:IPR000942"
FT                   /db_xref="UniProtKB/TrEMBL:Q534Z2"
FT                   /protein_id="AAW50903.1"
FT                   /translation="MRSSSPSKAHSTQVPIKVQHRLAKKGTRRRRVDLPCGCSYFIALA
FT                   CHNHGFTHRGTHHCSSSREWRVYLGDSKSPIFQDNRASQPAIPDEPRHHNRPSTVQSQP
FT                   EESAGDTQMVPSLPNLDDLTASDWSFLKGI"
FT   gene            complement(869..>1282)
FT                   /gene="AC1"
FT   CDS             complement(869..>1282)
FT                   /codon_start=1
FT                   /gene="AC1"
FT                   /product="replicase"
FT                   /db_xref="GOA:Q534Z1"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="UniProtKB/TrEMBL:Q534Z1"
FT                   /protein_id="AAW50904.1"
FT                   /translation="TGKTMWARSLGPHNYLCGHLDLNPKVYNNEAWDNVIDDVDPHYLK
FT                   HFKEFMGAQRDWQSNRKYGKPVQIKGGIPTIFLCNPGPKSSYKEFLDDEENSKLKNWAI
FT                   KNAIFVTLEGPLYSGSNQSATQASQEGDQTSTS"
XX
SQ   Sequence 1282 BP; 336 A; 247 C; 295 G; 404 T; 0 other;
     gggaagattt ggatggatga gaacatcaag accaagaatc acacgaacag tgtcatgttt        60
     tttcttgttc gtgaccgtcg tcctactgac aagccacaag actttggaga ggtgttcaat       120
     atgtttgaca acgagcctag cactgctact gttaagaata tgcacagaga tcgttatcag       180
     gtgttgagga agtggcatgc aactgtcacc ggtggacagt acgcttcaaa ggaacaggca       240
     ttagtgaaga agtttgttag ggttaataat tatgttgttt ataaccagca agaggctggg       300
     aaatatgaga atcatactga gaatgcattg atgttgtata tggcgtgtac tcacgcctct       360
     aaccctgtgt atgctacttt gaagatacgg atctattttt atgattcagt atcgaattaa       420
     taaatattga attttattga atatgtttgg tctacatata caacgtggtg taatacattc       480
     cataatacat gatcaacggc tctaattaca ttgttaatac tgataactcc taaattattt       540
     aaatacttaa gcacttgggc cttaaatacc cttaagaaac gaccagtcgg aggctgtgag       600
     gtcatccaga ttcggtagac taggaaccat ttgtgtatcc ccagcacttt cctcaggttg       660
     tgattgaact gtacttggac ggttatgatg tcttggttca tcaggaatgg ccggttgtga       720
     tgctctgtta tcttgaaata taggggattt tgaatctccc agataaacac gccattctct       780
     gcttgagctg cagtgatgag ttcccctgtg cgtgaatcca tggttgtggc aggctaatgc       840
     tatgaagtaa gaacaaccgc aaggtagatc aactcgtcga cgtctggtcc ccttcttggc       900
     tagcctgtgt tgcactttga ttggaacctg agtagagtgg gccttcgagg gtgacgaaga       960
     tcgcattctt tatagcccag ttttttagtt tggaattttc ttcgtcatcc aagaactctt      1020
     tataactgga ctttggtcct ggattgcaga ggaagattgt ggggattccg cctttaattt      1080
     gaactggctt cccgtacttt ctattggatt gccagtctct ttgggccccc atgaattcct      1140
     taaagtgctt taaatagtgg gggtctacgt catcaattac gttatcccag gcttcattat      1200
     tgtatacctt tgggttaagg tctagatgac cacacagata attatgtggc cctagtgatc      1260
     tggcccacat agtcttcccc gt                                               1282
//