ID   AY705785; SV 1; linear; genomic RNA; STD; VRL; 1708 BP.
XX
AC   AY705785;
XX
DT   14-SEP-2004 (Rel. 81, Created)
DT   22-JAN-2005 (Rel. 82, Last updated, Version 2)
XX
DE   White clover cryptic virus 1 segment RNA2, complete sequence.
XX
KW   .
XX
OS   White clover cryptic virus 1
OC   Viruses; Riboviria; Partitiviridae; Alphapartitivirus.
XX
RN   [1]
RP   1-1708
RX   DOI; 10.1007/s00705-004-0423-7.
RX   PUBMED; 15503213.
RA   Boccardo G., Candresse T.;
RT   "Complete sequence of the RNA2 of an isolate of White clover cryptic virus
RT   1, type species of the genus Alphacryptovirus";
RL   Arch. Virol. 150(2):403-405(2005).
XX
RN   [2]
RP   1-1708
RA   Boccardo G., Candresse T.;
RT   ;
RL   Submitted (04-AUG-2004) to the INSDC.
RL   UMR GD2P, IBVM INRA, 78 Av E. Bourleaux, Villenave d'Ornon 33883, France
XX
DR   MD5; bc2e8610aa90e630cb2d33c93568aed6.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1708
FT                   /organism="White clover cryptic virus 1"
FT                   /segment="RNA2"
FT                   /mol_type="genomic RNA"
FT                   /note="type member of Alphacryptovirus genus"
FT                   /db_xref="taxon:292052"
FT   5'UTR           1..104
FT   CDS             105..1568
FT                   /codon_start=1
FT                   /product="capsid protein"
FT                   /db_xref="GOA:Q64FN9"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q64FN9"
FT                   /protein_id="AAU14889.1"
FT                   /translation="MNQDTPLANLNGPEVPSGNVPPANPPGRTNVAPPAQGAVQQPPAP
FT                   AARRARNPHGPVPPAGPSRSAGAPAMLELSAAYPMYTEQRRAPNYYVPDAQLLFHTLGV
FT                   CDQLMTTTDRFLRSMPSWLPIVSQLYVSVLWNVMILKVYVNTGYGAAYAHDLDVLLNHL
FT                   QINECMIPGPLVPFFQSLAAVNGPFDWIGDIIPAMPSFTELWTDEFAPHAAYARQIPIP
FT                   AILLDQLYRFATLAFDAQLQTNYATFEWYSNIFNQDVNTHNARLRLGPQLCGSLFTTQA
FT                   QCDSARAFWNPAFANGFTRIDAANGPLMAFPQLLGFISQDGALQSNWFMHISLIMHKYA
FT                   QYFNGSVPLKSISPVGIGASVIYGTPLEDTNVRDWLYPAAAAIAPFRSTRFLPRRELPA
FT                   TLAVRFAHADHEIEEQAEQYSILCHTNMKWYVNNATQNNHTAIEGNYIHQGEYWNFTPF
FT                   RYSPPVSLKTQFAQVIASRYHQQAANRAE"
FT   3'UTR           1569..1708
XX
SQ   Sequence 1708 BP; 371 A; 555 C; 293 G; 489 T; 0 other;
     gttttaactt aagcttttcg taatcaaaat agaacgcgaa tctcaactgc tctacctcaa        60
     ctttttacct actctaccgc taacttagcc gccctaccca caagatgaat caagacactc       120
     ctctcgccaa tctcaatggc cccgaagttc catccggcaa cgtccctccc gccaaccctc       180
     ctggtcgaac aaacgtcgcc cctcccgccc aaggtgctgt tcaacagcct cctgctccgg       240
     ctgctcgtcg tgcccgcaac ccacacggcc ctgtccctcc tgctggacca tcccgttctg       300
     ctggtgcccc tgctatgctt gaactttccg ctgcctaccc tatgtacacc gaacaacgtc       360
     gtgcacccaa ctactatgtg cctgacgcac aacttctctt ccacaccctc ggtgtctgcg       420
     accaactgat gaccacaact gaccgcttcc tccgctccat gccttcatgg ttgccaatcg       480
     tctctcagct ttacgtctct gtcctttgga atgttatgat actcaaggtc tatgtcaaca       540
     ccggttacgg tgctgcctac gcacatgact tggatgtcct cctcaaccac cttcaaatta       600
     acgaatgtat gatccctggc cccctcgtcc cctttttcca atccctcgct gccgtcaatg       660
     gcccttttga ctggataggt gatattattc ctgccatgcc atcattcact gaactctgga       720
     ctgatgaatt tgctccccat gctgcttacg ctaggcaaat acccatacct gccatcctcc       780
     ttgatcagct ttaccgtttt gccactcttg cctttgatgc tcaactacaa acaaactatg       840
     ccacttttga atggtatagc aacattttca accaagatgt caacactcac aatgctcgtc       900
     tccgcctcgg ccctcaactc tgtggctctc tgttcacaac acaagcccag tgtgactccg       960
     cccgcgcctt ctggaaccca gcttttgcta atgggtttac tagaatcgat gctgctaatg      1020
     gccccctaat ggcttttccc caactacttg gatttatttc tcaagatggt gccctgcaat      1080
     ctaactggtt catgcacatc tccttaatca tgcacaagta cgctcagtac ttcaatggtt      1140
     ctgtacccct taagtccatc tcccctgttg gaattggtgc ttccgtgatc tacggaactc      1200
     cgcttgaaga taccaacgtc cgtgactggc tctaccccgc tgctgctgct attgctcctt      1260
     tccgttctac ccgcttttta ccgcgtcgtg aactacctgc gaccctagct gtccgtttcg      1320
     cccatgccga tcatgagatc gaagaacaag ctgaacagta ttccatactg tgtcacacca      1380
     atatgaagtg gtatgtcaac aacgccactc agaacaacca cacagctatt gaaggaaact      1440
     acattcacca aggtgagtac tggaacttca cccctttccg ctactctcct cctgtctctc      1500
     tgaagaccca gtttgctcaa gtgatcgctt cccgctacca ccaacaagct gccaaccgtg      1560
     ctgaatgatt cctccgacct ttgatgtcgt taatctcacc aattttgctg cctaagtgca      1620
     gttaatctga tcagattgga ttttttttgt tttaactttc ttttaatcaa ctttatcctt      1680
     ttaattctga cctattatcg ctcttgcg                                         1708
//