ID AY686718; SV 1; linear; genomic RNA; STD; VRL; 3061 BP. XX AC AY686718; XX DT 31-JUL-2005 (Rel. 84, Created) DT 08-JUL-2006 (Rel. 88, Last updated, Version 3) XX DE Tomato yellow ring virus strain TYRV-t non-structural protein (NS) and DE nucleocapsid protein (N) genes, complete cds. XX KW . XX OS Tomato yellow ring virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Tospoviridae; unclassified Tospoviridae. XX RN [1] RP 1-3061 RX DOI; 10.1094/PHYTO-95-0852. RX PUBMED; 18944405. RA Hassani-Mehraban A., Saaijer J., Peters D., Goldbach R., Kormelink R.; RT "A new tomato-infecting tospovirus from iran"; RL Phytopathology 95(8):852-858(2005). XX RN [2] RP 1-3061 RG Wageningen University RA Mehraban A.H., Peters D., Goldbach R., Kormelink R.; RT ; RL Submitted (15-JUL-2004) to the INSDC. RL Laboratory of Virology, Wageningen University, Binnenhaven 11, Wageningen RL 6709 PD, The Netherlands XX DR MD5; 7701f8fa6514e982c4a6f324c1b5cb08. DR EuropePMC; PMC2828552; 20151164. DR EuropePMC; PMC3371012; 22715400. DR EuropePMC; PMC4263035; 25465801. DR EuropePMC; PMC4326804; 25540203. DR EuropePMC; PMC4439075; 25993336. XX FH Key Location/Qualifiers FH FT source 1..3061 FT /organism="Tomato yellow ring virus" FT /segment="S" FT /host="tomato" FT /strain="TYRV-t" FT /mol_type="genomic RNA" FT /country="Iran" FT /note="acronym: TYRV" FT /db_xref="taxon:304859" FT gene 72..1403 FT /gene="NS" FT CDS 72..1403 FT /codon_start=1 FT /gene="NS" FT /product="non-structural protein" FT /db_xref="InterPro:IPR004915" FT /db_xref="UniProtKB/TrEMBL:Q49N23" FT /protein_id="AAV98586.1" FT /translation="MSTVKTTAVEFFSNYGISCDSRSSNDCYRIFSGEGKTLMDVFMHS FT TIGIKPAFSVGNLGRNEDIKANEAEIIDEHHYYDVFDKLGLDISFCNHFMEITVKKPSV FT KNYETKFQMHNQIFEPSTQLLRHGIGKMTESDFYACSNLSKDEIYPSEWFINEARRKNF FT FIADVSGFSLDYGFSVMGKTTSYWKENMDKTSLISVKQKSMNNPLVPTNRLLSASTIKA FT IEIASNIACNKSIILAVKQDLTSDLKTQFRISLPGEYNETAIARTFLINQGRKGQYICI FT YAKTVMDKSNERTTLILKIVTQSRPGEYISTLLPKDHSDCRRVVGASFGIVEQKPTDPN FT YNKIIAHELLSVHTNFALKISKVLKKPVIVYKIYEKELLPRKVEIEGRTFNYQEDIDGN FT VYFLSTTLAILPLSVSVLSYLDSASPSCWKESRGLGHFTVEELQ" FT gene complement(2166..2990) FT /gene="N" FT CDS complement(2166..2990) FT /codon_start=1 FT /gene="N" FT /product="nucleocapsid protein" FT /db_xref="GOA:Q49N22" FT /db_xref="InterPro:IPR002517" FT /db_xref="UniProtKB/TrEMBL:Q49N22" FT /protein_id="AAV98587.1" FT /translation="MATARVSKENIEKLLAGGEADVVIEAEETAGFNFKEFVLANKAMK FT MTFNNGYTILRNRAGIYKMVKAGQFKFQGNPIIVPSATVSAGQDDWTFRRLEGFIRAKM FT FMELIAVENASEQQKMYEKLCELPMVNAYGLKPSPKFDATTARVMLTLGGPLPLMASLD FT KFAATAFPLAYFQNVKKEALGISKFSTYDQLGKIARVMATKEFTFTGVSKDIFEETIKI FT LNDCTPGTAGAASLNKFNEQIKALESAFGKIVDDNGAGSSKPKPSSKKNDAF" XX SQ Sequence 3061 BP; 1027 A; 542 C; 531 G; 961 T; 0 other; agagcaatcg acgtataaac ataaaatcat tgacagcttg aaacaaagta agcagcaata 60 ctatctcagc catgtctacc gtcaaaacaa cagcagtgga attcttctca aactatggga 120 tatcctgtga ctctcgttct agcaacgact gctataggat attctctggt gagggaaaaa 180 ctctcatgga tgtttttatg cattctacta ttggaatcaa gccagcattc agtgttggta 240 atctcgggag gaatgaagac attaaagcta atgaagcaga gattattgat gagcatcact 300 attatgatgt ttttgacaaa cttgggctgg acataagctt ctgcaaccat ttcatggaga 360 ttactgttaa gaaaccatca gtgaaaaatt atgagacaaa attccagatg cacaatcaga 420 tatttgaacc ttcaacacaa ctgttgcgtc atggtatagg caaaatgact gaatctgatt 480 tctatgcttg ctcaaatctg tccaaagatg aaatatatcc tagcgaatgg ttcataaatg 540 aagctaggag aaagaacttt ttcatagctg atgtttctgg gttcagccta gattatgggt 600 tttcagtgat gggcaaaact acttcttatt ggaaagagaa tatggacaaa acatcactga 660 tttcagtcaa gcaaaaatcc atgaacaacc ctctggtgcc tacaaacaga cttttatcag 720 cttccactat aaaagcaata gaaatagcat ctaacattgc ttgcaacaaa tcgattattc 780 ttgcagtcaa acaagatctg acttccgacc tcaaaactca atttaggatc tctttgccag 840 gagaatataa tgaaactgcc atagctagaa catttttaat taatcaagga aggaaaggtc 900 aatatatatg catctatgcc aaaactgtta tggataaatc caatgaaagg acaacattga 960 tcttaaaaat tgtcacccaa agcaggccag gagagtacat ctcaacactg cttccaaaag 1020 accattcaga ttgcaggaga gtggttggag ctagctttgg gattgttgaa cagaaaccaa 1080 ctgatccgaa ctacaacaag ataattgcgc atgaactact ttctgtgcac acaaattttg 1140 ctctaaagat atctaaagtt ttgaagaaac ctgtaatagt atacaaaatt tatgagaaag 1200 aattgttgcc gagaaaagta gaaatagaag gtaggacatt caactaccag gaggatattg 1260 atggaaatgt ttacttctta tctactactc ttgcaatttt gcccttatct gtttctgttt 1320 tgtcctacct ggattctgcg tctccatctt gctggaagga atccagaggg ttaggccatt 1380 tcactgtaga ggagttacag tgatcaaagt ggtagattct gtgataatta gtataagatc 1440 ttgtttatcg tattgtaagc atgtaagctt tgaactgctt gttcaaataa tttaagtatt 1500 gtagttcttt tatcatacat caataagctg ttttaactgt ttttgagtat tgtctacttt 1560 taaaaataca taagcaagtt gttttaagtg tttttgagta ttgtctattt ttaaagaatc 1620 ttttaataat aaagtaaggt atgtaagtca gtaataaagg agtactagtt tagataaaat 1680 aaatagatag aataatgtag actaagtaaa taagataaaa caaataaacc aaaagataaa 1740 acaaaaagaa aaactaaaag caaaaaaacc aaaaaaacca aaaaacaaaa accaaaaaaa 1800 gcctacgggc aaattctgac ttccttaccc atataattat tggtaagaaa accagaattt 1860 gcccgtaggc tttttttggt ttttttgttt tttgttgttt ttggtttttt gttttttgat 1920 ttttttggtt tttcataaac ttatttaaac acccttgatt atatttaaac acataattaa 1980 atgtgataga cagataaaac ttaaacacgc tgataaacta tatggcacac aaaaaactga 2040 aataaaatat ttaaatatat ataagtaata aaacacacaa tgactagaag tactttagta 2100 atcttaaata ctatataata ctgagtaata gcagaaaatg cttttaaaac cagtaaaagc 2160 actcattaaa atgcatcatt ctttttggaa gatggtttag gctttgaaga cccagcacca 2220 ttatcatcaa caattttccc aaaagcactt tcaagagctt taatttgctc attgaactta 2280 ttcaatgaag cagcaccagc agtccctgga gtacagtcat ttagaatctt tatggtctct 2340 tcaaaaatgt ctttggagac cccagtgaaa gtgaattctt tagttgccat aactcgggca 2400 atcttgccca gctggtcata agttgaaaat ttgcttattc ccaaagcttc tttttttaca 2460 ttctggaaat aagccaatgg gaacgcagtt gcagcaaact tatcaagact tgccatcaag 2520 gggagagggc ctcctagtgt tagcataact ctagctgtag ttgcatcaaa tttagggcta 2580 ggttttaaac catatgcgtt taccattgga agctcacaaa gtttttcata cattttctgt 2640 tgctcgcttg cattctccac agcaatcagt tccatgaaca ttttggctct tatgaagcct 2700 tccaacctcc tgaatgtcca atcatcttga ccagcgctta cagttgcact gggaacaata 2760 ataggattgc cttggaattt aaattggcct gctttcacca ttttgtaaat acctgctctg 2820 ttccttaaaa ttgtgtaacc gttattgaac gtcattttca tggctttgtt agccaaaaca 2880 aactctttga agttgaatcc tgcagtttct tcagcttcaa tcactacatc tgcttcacca 2940 ccagcaagaa gcttctcaat gttctctttg ctcactcgtg cggtagccat ggtgtttact 3000 taggaagcag cttactttgt ggaagttgtt tgaatttaat gtgttatacc tcgattgctc 3060 t 3061 //