ID AY675353; SV 1; linear; mRNA; STD; VRL; 3615 BP. XX AC AY675353; XX DT 28-JUL-2004 (Rel. 80, Created) DT 11-JAN-2006 (Rel. 86, Last updated, Version 3) XX DE Soochong virus-1 isolate SC-1 glycoprotein precusor mRNA, complete cds. XX KW . XX OS Soochong virus-1 OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Hantaviridae; Mammantavirinae; Orthohantavirus; OC unclassified Orthohantavirus; unclassified Hantavirus. XX RN [1] RP 1-3615 RX DOI; 10.1002/jmv.20538. RX PUBMED; 16372283. RA Baek L.J., Kariwa H., Lokugamage K., Yoshimatsu K., Arikawa J., RA Takashima I., Kang J.I., Moon S.S., Chung S.Y., Kim E.J., Kang H.J., RA Song K.J., Klein T.A., Yanagihara R., Song J.W.; RT "Soochong virus: an antigenically and genetically distinct hantavirus RT isolated from Apodemus peninsulae in Korea"; RL J. Med. Virol. 78(2):290-297(2006). XX RN [2] RP 1-3615 RA Song J.-W., Moon S.-S., Baek L.J.; RT ; RL Submitted (02-JUL-2004) to the INSDC. RL Microbiology, College of Medicine, Korea University, 5-ka, Anam-dong, RL Sungbuk-ku, Seoul 136-705, Korea XX DR MD5; e7836e2a4b02161a0a3abbb2b730e2ad. DR EuropePMC; PMC1997112; 17711577. DR EuropePMC; PMC2262106; 18217572. DR EuropePMC; PMC2786626; 19828747. DR EuropePMC; PMC2823670; 20096099. DR EuropePMC; PMC3147906; 21632770. DR EuropePMC; PMC4054438; 24741077. DR EuropePMC; PMC4153883; 23871164. DR EuropePMC; PMC4851257; 26932442. XX FH Key Location/Qualifiers FH FT source 1..3615 FT /organism="Soochong virus-1" FT /segment="M" FT /host="Apodemus peninsulae" FT /isolate="SC-1" FT /mol_type="mRNA" FT /db_xref="taxon:286541" FT CDS 41..3448 FT /codon_start=1 FT /product="glycoprotein precusor" FT /note="G1 and G2 glycoprotein polyprotein" FT /db_xref="GOA:Q6B7Z0" FT /db_xref="InterPro:IPR002532" FT /db_xref="InterPro:IPR002534" FT /db_xref="InterPro:IPR012316" FT /db_xref="InterPro:IPR016402" FT /db_xref="UniProtKB/TrEMBL:Q6B7Z0" FT /protein_id="AAT78478.1" FT /translation="MGLWKWLIIAVLVWPCFALRNVYDMKIECPHTVNFGENSVVGYVE FT LPPMPIADITQMMPESSCSMDNHQSLNTITKYTQVSWRKKADQAQSSQNSFETVASEVD FT FKGTCVLKHKMVEDSYRSRKSIICYDLSCNSTFCKPTLYLIVPVHACNMMKSCLIALGP FT YRVQVVYERTYCMSGVFIERKCFVPDQSVVSIIKHGIFDIASVHIVCFFVAIKGGTYKI FT LEQVKKSFELTCNDTDNKIQGYYTCLVGGNSAPIYVPTLDDFRSMEAFAGIFKSPHGED FT HDLAGEEIASYSIVGPATAKVPHSASTDTLTLVAFSGIPSYSSFSVLTGSADARHGFSP FT GFFPQLNQTRCDKTALPLTWTGMIDLPGYYEAVHPCTVFCVLSGPGASCEAFSEGGIFN FT ITSPMCLVSKQNRFRSSEQQVNFVCQRVDMDIVVYCNGQKKVILTKTLVIGQCIYTITS FT LFSLLPGVAHSIAVELCVPGFHGWATAALLTTFCFGWVLIPAVTLVILTILKFIANIFH FT TSNQENRLKSVLKKIKEEFEKTKGSMVCDVCKYECETYKELKAHGVSCPQSQCPYCFTH FT CEPTEAAFQAHYQRCQVTHRFRDDLKKTVTPQNFTPGCYRTLNLFRYKSRCYIFTMWVF FT LLILESILWAASASETPLVPIWNDNAHGVGSVPMHTDLELDFSLASSSKYTYRRRLTNP FT LEETQSVDLHIELEEQTIGVDVHALGHWFDGRLNLKTSFHCYGACTKYEYPWHTAKCHY FT ERDYQYETSWGCNPADCPGVGTGCTACGLYLDQLKPVGSAYKIITIKYSRRVCVQFGEE FT NLCKVIDMNDCFVSRHVKVCIIGTVSKFSQGDTLLFFGPLEGGGLIFKHWCTSTCQFGD FT PGDIMSPRDRGFLCPEFPGSFRKKCNFATTPVCEYDGNMVSGYKKVMATIDSFQSFNTS FT SMHFTDERIEWKDPDGMLRDHINILVTKDIDFDNLGDNPCKVGLQTSAIEGAWGSGVGF FT TLTCQVSLTECPTFLTSIKACDKAICYGAESITLTRGQNTVKVSGKGGHSGSTFKCCHG FT EECSQIGLHAAAPHLDKVNGVSEMENSKVYEDGAPECGIKCWFVKSGEWISGIFNGNWI FT VLIVLCAFLIFSLILLSLLCPVRKHKKS" XX SQ Sequence 3615 BP; 1074 A; 693 C; 765 G; 1083 T; 0 other; tagtagtaga caccgcaaga gaaagcagtc aagcagcaac atgggtttat ggaagtggct 60 aataatagcc gttttggtat ggccatgttt tgccttgagg aatgtatatg acatgaaaat 120 tgagtgcccc catacagtca acttcggaga aaacagtgtg gtcgggtatg tggagctacc 180 acctatgcca attgctgaca tcacccaaat gatgccagaa agctcttgta gcatggataa 240 ccaccagtct ttgaacacaa tcacgaagta cactcaggtc agttggagaa aaaaagctga 300 ccaggcgcag tcaagccaga attcatttga aacagtagcc tctgaggtgg actttaaagg 360 aacttgtgtg ttaaaacaca aaatggtgga agactcatat cgcagtcgca aatcaataat 420 ttgctatgac ctctcatgca atagtacatt ttgtaaaccc accctttacc taattgtgcc 480 tgtacatgcc tgtaacatga tgaagagctg cctgatagca ctagggccct atcgagtaca 540 ggttgtctat gagagaacat actgcatgtc aggagtcttc attgaacgaa aatgctttgt 600 gcctgatcag agtgtagtga gcatcattaa acatggtata tttgacattg caagtgttca 660 tattgtttgt ttctttgttg caatcaaagg tggcacatat aagatccttg agcaggttaa 720 gaagtcattt gagctaacat gcaatgatac tgataataag atccaaggtt attatacatg 780 ccttgtggga ggaaactcag cacccatata tgttccaacc cttgatgact ttagatcaat 840 ggaggctttt gctggtatct ttaaatcccc tcatggagaa gatcatgacc ttgcagggga 900 agagattgcc tcttattcca ttgtaggacc tgccactgcg aaagtacccc atagtgctag 960 cacagacaca ctgaccttag ttgctttctc agggattcca tcctattcat cctttagtgt 1020 cctaacaggt tctgcagatg ctcgtcatgg ttttagccct ggattctttc cacaactaaa 1080 ccagacaagg tgtgataaga cagccttacc actgacttgg acaggtatga ttgatctacc 1140 tggctactat gaagcagtac atccatgcac tgttttctgt gttttgtctg gccctggagc 1200 atcttgtgaa gcattctcag aaggaggaat ctttaacatt acttctccaa tgtgcctagt 1260 ctcaaaacaa aatcgcttca gatcatcaga gcaacaagtc aactttgttt gtcaaagagt 1320 tgatatggat atcgtagttt actgtaatgg tcagaaaaaa gtgatattaa caaaaacctt 1380 agtaattggc cagtgtatat atacaataac tagcctgttt tcacttcttc ctggagttgc 1440 acattctatt gccgttgaat tgtgtgtccc tggcttccat ggctgggcca cagcagcact 1500 gcttacaaca ttctgctttg gttgggtgct aatacctgca gttacccttg tcatattaac 1560 aattctaaag tttattgcaa acattttcca cacaagcaat caggaaaaca ggttaaaatc 1620 agtcttaaag aaaattaagg aagagtttga aaagactaaa ggctctatgg tgtgtgatgt 1680 atgcaagtat gagtgtgaga catataaaga attaaaagca catggggtat catgtcctca 1740 gtctcaatgc ccatattgct ttacccattg tgaacctaca gaagctgcat ttcaagccca 1800 ttaccaaaga tgccaagtta cccatagatt tagggatgac ttaaagaaga cagtaactcc 1860 ccagaatttt accccaggct gttaccgtac cttaaatttg tttagatata aaagtaggtg 1920 ctatattttt acaatgtggg tgtttttatt aatcctagaa tccatattat gggctgctag 1980 tgcctctgaa actcctctag tccctatctg gaatgacaat gctcatgggg taggatctgt 2040 cccgatgcac acagaccttg aattagattt ctccttggct tctagctcta aatacactta 2100 ccgaagaagg cttacaaacc cacttgaaga gacacaatca gtagatctcc atattgagct 2160 tgaggaacaa actataggtg tagatgtgca tgcgttgggg cattggtttg atggccgctt 2220 aaatcttaaa acctcctttc actgctatgg tgcatgtaca aaatacgaat acccatggca 2280 tactgccaag tgtcattatg aacgagatta tcagtatgag acaagttggg gatgtaaccc 2340 agctgactgc cccggagttg gcacaggttg tactgcatgc ggcctatatc tagaccaatt 2400 aaaacctgtt ggtagcgctt ataaaatcat tacaataaaa tacagcagga gagtctgtgt 2460 tcagtttgga gaagaaaact tgtgcaaggt gattgatatg aatgactgct ttgtatcaag 2520 gcatgtcaag gtctgtataa ttggcactgt ttcaaaattt tctcaaggtg atacactatt 2580 gttttttgga ccgttagagg gtggtggctt aatatttaag cactggtgta catctacatg 2640 tcagtttggg gatcctggag atattatgag tccaagagat agaggcttcc tgtgccctga 2700 atttcctggg agttttcgga agaagtgcaa ctttgcaact accccagtat gtgagtatga 2760 tggaaacatg gtctcagggt ataagaaggt catggctaca attgactcat ttcaatcatt 2820 taatactagc tctatgcatt ttactgatga gagaatagag tggaaagatc ctgatgggat 2880 gttacgagac cacataaata tcctagttac aaaggatatt gactttgaca accttggtga 2940 caatccttgt aaagttgggt tacaaacatc agctatagag ggagcttggg gctctggtgt 3000 tggtttcaca ttgacttgtc aagtttcctt aacagagtgt cctacttttc tgacatcaat 3060 taaagcatgt gacaaagcaa tctgttatgg cgcagagagc ataacactta caagaggaca 3120 gaatactgtt aaagtctcag ggaaaggagg gcatagtgga tcaacattta agtgctgtca 3180 tggcgaagag tgctcacaaa ttggtcttca tgctgctgca cctcatcttg acaaagtcaa 3240 tggggtttca gagatggaaa acagtaaggt ttatgaagat ggagcacctg aatgtggcat 3300 aaaatgttgg tttgttaagt caggtgaatg gatttcaggg attttcaatg gtaattggat 3360 agtactcatt gtcttatgtg catttttaat attctcactt atattgctta gccttctctg 3420 tcctgttcga aagcacaaaa agtcatagtt ctaaagcact gcatttataa ttatcttatt 3480 tataattaac atttattaac tgctatactt tactacattt tatctaacac actaaaaaaa 3540 atagtagctt tttaaccaca caacttaacc ttttcttctg tatgatgtct taacatcttg 3600 cggtgtctac tacta 3615 //