ID   AY675349; SV 1; linear; mRNA; STD; VRL; 1695 BP.
XX
AC   AY675349;
XX
DT   28-JUL-2004 (Rel. 80, Created)
DT   11-JAN-2006 (Rel. 86, Last updated, Version 3)
XX
DE   Soochong virus-1 isolate SC-1 nucleocapsid protein mRNA, complete cds.
XX
KW   .
XX
OS   Soochong virus-1
OC   Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes;
OC   Bunyavirales; Hantaviridae; Mammantavirinae; Orthohantavirus;
OC   unclassified Orthohantavirus; unclassified Hantavirus.
XX
RN   [1]
RP   1-1695
RX   DOI; 10.1002/jmv.20538.
RX   PUBMED; 16372283.
RA   Baek L.J., Kariwa H., Lokugamage K., Yoshimatsu K., Arikawa J.,
RA   Takashima I., Kang J.I., Moon S.S., Chung S.Y., Kim E.J., Kang H.J.,
RA   Song K.J., Klein T.A., Yanagihara R., Song J.W.;
RT   "Soochong virus: an antigenically and genetically distinct hantavirus
RT   isolated from Apodemus peninsulae in Korea";
RL   J. Med. Virol. 78(2):290-297(2006).
XX
RN   [2]
RP   1-1695
RA   Song J.-W., Moon S.-S., Baek L.J.;
RT   ;
RL   Submitted (02-JUL-2004) to the INSDC.
RL   Microbiology, College of Medicine, Korea University, 5-ka, Anam-dong,
RL   Sungbuk-ku, Seoul 136-705, Korea
XX
DR   MD5; 0f45a5654ddaf2aec4a83739f6a739cc.
DR   EuropePMC; PMC1578555; 16953877.
DR   EuropePMC; PMC1997112; 17711577.
DR   EuropePMC; PMC2786626; 19828747.
DR   EuropePMC; PMC3147906; 21632770.
DR   EuropePMC; PMC4054438; 24741077.
DR   EuropePMC; PMC4851257; 26932442.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1695
FT                   /organism="Soochong virus-1"
FT                   /segment="S"
FT                   /host="Apodemus peninsulae"
FT                   /isolate="SC-1"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:286541"
FT   CDS             36..1325
FT                   /codon_start=1
FT                   /product="nucleocapsid protein"
FT                   /db_xref="GOA:Q6B7Z4"
FT                   /db_xref="InterPro:IPR002214"
FT                   /db_xref="UniProtKB/TrEMBL:Q6B7Z4"
FT                   /protein_id="AAT78474.1"
FT                   /translation="MATMEELQKEINAHEGQLVIARQKVRDAERQYEKDPDELNKRAST
FT                   DREGVAASIQAKIDELKRQLADRIATGKNLGKEQDPTGVEPGDHLKERSMLSYGNVLDL
FT                   NHLDIDEPTGQTADWLSIVVYLTSFVVPILLKALYMLTTRGRQTTKDNKGTRIRFKDDS
FT                   SFEDVNGIRKPKHLYVSLPNAQSSMKAEEITPGRYRTAICGLYPAQIKARQMVSPVMSV
FT                   IGFLALAKDWGDRIEQWLSEPCKLLPDTAAVSLHGGPATNRDYLRQRQAALGNMETKES
FT                   KAIRQHAETAGCSMIEDIESPSSIWVFAGAPDRCPPTCLFIAGIAELGAFFSILQDMRN
FT                   TIMASKTVGTSEEKLRKKSSFYQSYLRRTQSMGIQLDQRIIVLFMVAWGKEAVDNFHLG
FT                   DDMDPELRTLAQSLIDLKVKEISNQEPLKL"
XX
SQ   Sequence 1695 BP; 545 A; 320 C; 386 G; 444 T; 0 other;
     tagtagtaga ctccctaaga gctacgataa caacaatggc aactatggag gaattgcaaa        60
     aggagatcaa tgcccatgag ggtcaacttg tgatagcaag gcaaaaagta agggatgcag       120
     aaaggcaata tgagaaggat ccagatgagt tgaacaaaag agcatcaaca gacagagaag       180
     gggttgcagc atccattcag gcaaaaattg atgaattaaa gaggcagttg gcagatagaa       240
     tagcaactgg aaaaaacctg ggaaaggagc aagacccaac aggtgttgaa cccggggacc       300
     atttaaaaga gagatcaatg ctcagctatg ggaatgtact ggatttgaac catctagaca       360
     ttgatgagcc aacaggtcag actgcagact ggctgagcat tgttgtttat cttacatcct       420
     ttgtggttcc gatactcctg aaagcccttt acatgctgac aacaagggga agacagacaa       480
     ctaaggacaa taaagggaca agaatccgat tcaaagatga cagctctttt gaagatgtga       540
     atggaattcg gaagccgaaa catctctatg tgtctttacc taatgcacag tctagtatga       600
     aggcagaaga gataacacct ggaaggtaca ggacagcaat ctgtggatta taccctgctc       660
     agattaaagc cagacagatg gtaagcccag tcatgagtgt aattggattc cttgccttgg       720
     ctaaagactg gggtgatagg attgagcagt ggctaagtga accctgtaag ctcctcccag       780
     acacagcagc agtaagcctc catggtggtc ctgcaactaa tagagattat ctccggcaaa       840
     ggcaggcagc tttaggaaac atggagacta aggagtcaaa agcaatccgc caacatgcag       900
     aaacagcagg ctgtagcatg atagaagata ttgagtcacc atcatccatc tgggtgtttg       960
     ctggggcccc agaccgatgc ccaccaacat gtttattcat tgcagggatt gcagagttag      1020
     gtgccttttt ttccatctta caagatatgc ggaatactat aatggcatct aagacagttg      1080
     gtacatcaga ggaaaagttg agaaagaagt catcatttta ccagtcttac ctcaggagaa      1140
     cacaatcaat gggaatacaa ctggaccaga gaattattgt tctctttatg gttgcttggg      1200
     ggaaggaagc agtggataat ttccatcttg gagatgacat ggatcctgaa ttgaggacac      1260
     tagcacagag tttgattgat ctaaaagtga aggaaatttc aaaccaagaa cctttaaaac      1320
     tataatcact gaatgtataa cccatattat gtgatcattt tatactactg aatcattatc      1380
     aatcatattt gcactattat tatcagggga atcaacatat tagggtgagg atacatttat      1440
     gggtgggaat tattacttag agggtgggtc agttaacccg ttgtgggtgg gtttagttcc      1500
     aggctgcctt aagtagcttt ttttgtatat aaagatgtag atatcatttg atccttaaac      1560
     taattttgct ttctttcctt cttccttgct ttctctgctc actaacaaca acattctacc      1620
     tcaacacaaa actacctcac ttcaactacc tcatttgctt tttccttgat tgtcttttta      1680
     gggagcatac tacta                                                       1695
//