ID AY523538; SV 1; linear; genomic RNA; STD; VRL; 2752 BP. XX AC AY523538; XX DT 31-JAN-2005 (Rel. 82, Created) DT 16-APR-2005 (Rel. 83, Last updated, Version 2) XX DE Sweet potato feathery mottle virus isolate 115/1s polyprotein gene, partial DE cds. XX KW . XX OS Sweet potato feathery mottle virus OC Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA stage; OC Potyviridae; Potyvirus. XX RN [1] RP 1-2752 RA Ateka E.M., Barg E., Njeru R.W., Vetten H.J.; RT "Biological serological and molecular variability of Sweet potato feathery RT mottle potyvirus isolates"; RL Unpublished. XX RN [2] RP 1-2752 RA Ateka E.M., Barg E., Njeru R.W., Vetten H.J.; RT ; RL Submitted (10-JAN-2004) to the INSDC. RL Institute for Plant Virology, Microbiology and Biosafety, Federal RL Biological Research Center for Agriculture and Forestry, Messeweg 11/12, RL Braunschweig 38104, Germany XX DR MD5; bd84ef28ca1275f6a037639db6cc3335. XX FH Key Location/Qualifiers FH FT source 1..2752 FT /organism="Sweet potato feathery mottle virus" FT /strain="O" FT /isolate="115/1s" FT /mol_type="genomic RNA" FT /country="Kenya" FT /db_xref="taxon:12844" FT CDS 77..>2752 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="GOA:Q5GIV3" FT /db_xref="InterPro:IPR001456" FT /db_xref="InterPro:IPR002540" FT /db_xref="UniProtKB/TrEMBL:Q5GIV3" FT /protein_id="AAS99561.1" FT /translation="MATVMASVKPAGKRKLTWKECCNKWGKAAMEQQQQQQSKKTVHLG FT RDHLAAYLLAFVPDTEWHKYYYGNRGGPSPALLILKGAIEYGEVYKWESELTFCAECDD FT VLDGHKCDSCGHRYIRRDDNIADSMNDIARALGGYDAYYASNWAVYETAKYELDQVAPT FT AGMLYKQAKEAEKLLGKRPTRREIQEVEDLWAEYEEAAAKEAAEASEASNEYATPEVVN FT KTTYLSNEEDDEAFPPLVITIETVAPATTIIEPVPEANKTPEVQAPLVSAPEVSVAATF FT VEATNNGEGEQLPTQEKVTKNANCSAANPITLGNVSIGDIQFGTISCALGQSKVQETET FT TKESTTGFFFGTIPAIIPLPTIPIMKLESAIVEPIATPVVEVTSNEIVEVPIAAPTEME FT EAPKAPLPKHLYPWTSKTQTPGGVHHKMVRKWVQKTQQAAAEKEKLVWKKLDEQLAVRN FT EARKDLKVKWRWGLYRLVRKTRKDNQRQRRQKRMEKEQQLLTAMQPQILTSISIAGGPV FT ASLEMTPTLNGKIFCTPSMKKKRTLKSPMLTQERIHELMQAVLKIACKKEMNVELVGKK FT STRGQYKKFQGAKHLFLHLKHMKGLRESVDLRVHPTIQDIVLQAAKVGAWEKLIKTVTL FT SKGSSGLVMNPDKLLGPRGHAPQGMFVVRGAFKGVLYDARMKLGRSVLPYITQFSSNME FT RFLLGFDSKFKQMRQIDVDHVCESNYDAEQAGAVAAITHHMLYPMGRTTCKSCINNIED FT MSREEWCEYVKSFINKNKILSQSDYKDFVHLPQIMDFLSESLVNTNKNLKAFNEIQSLI FT GDRNDAPFINVCEINKILVKGGRTKSDELIRASENLLELARYLKNRTENIKKGSLQSFR FT NKISQKSSVNLALMCDNQLNH" FT mat_peptide 77..2143 FT /product="P1 protein" FT mat_peptide 2144..>2752 FT /product="HCpro protein" XX SQ Sequence 2752 BP; 898 A; 565 C; 649 G; 640 T; 0 other; agcataactt gcgatctact tactattagc aactttcagt aaattgcaat caagtcctag 60 ttctcgcgat tttgaaatgg caaccgtgat ggcatctgtg aaaccggctg gtaagcgaaa 120 gcttacatgg aaggaatgct gcaacaagtg ggggaaggct gctatggaac agcagcaaca 180 gcaacagtct aagaagactg ttcacttggg acgtgaccat ctggctgcgt accttcttgc 240 atttgtgcca gatactgaat ggcataaata ttattacggc aaccgtgggg gaccatctcc 300 tgctttactt attctgaagg gcgctatcga gtacggtgaa gtatataagt gggaatctga 360 actcactttc tgtgctgaat gtgatgatgt cctagatgga cacaagtgcg acagctgcgg 420 acaccgctac attagacgcg atgacaatat cgcggatagc atgaacgaca tcgctagagc 480 gttaggaggg tatgatgcat actatgcatc caactgggca gtgtatgaaa ctgccaaata 540 tgagcttgat caagtcgcac ccacagctgg catgctgtac aagcaggcca aggaggctga 600 gaaattgctg gggaagcgcc caacaagacg ggagattcaa gaggtcgagg acctctgggc 660 tgaatatgag gaagccgctg ctaaggaggc agctgaggcg tctgaagcct caaatgaata 720 tgccacgcct gaggtggtaa acaagaccac atacctcagc aatgaagagg atgatgaagc 780 attcccaccc cttgtgataa ctattgaaac ggtggcacct gctacgacta tcattgaacc 840 cgtcccagaa gcaaacaaaa cccctgaagt tcaggcacct cttgtgtctg cgccagaagt 900 atcagtagca gccacatttg tggaggctac taacaacgga gaaggtgaac aacttccaac 960 ccaggagaaa gtcacgaaga acgctaattg ctcagcagct aaccctatta ctcttgggaa 1020 cgtgtcaatt ggcgacatcc aattcggcac aatttcttgc gcattaggac aaagtaaggt 1080 ccaagagact gaaaccacta aggagtcaac cactggcttc ttctttggaa ccatccctgc 1140 tatcattcca ctcccaacta ttccaatcat gaaactggag tctgctattg ttgaacctat 1200 tgccacacct gtggtagagg tcacaagtaa cgaaattgtg gaagtcccga tcgcagctcc 1260 cactgagatg gaagaagcgc caaaagcacc attaccaaaa catttatatc cttggacatc 1320 taagactcaa acacctggtg gagtacacca caagatggtg cgtaaatggg ttcagaaaac 1380 tcaacaagct gcagcagaga aagagaagct cgtctggaaa aaactggacg aacaattggc 1440 tgtaaggaac gaggccagaa aggacctcaa agtgaaatgg aggtgggggc tctacagatt 1500 ggtcagaaag accaggaagg acaaccaaag acagcgccga cagaagcgca tggagaagga 1560 acaacaatta ctgacggcca tgcaaccgca aattctgacg agcatctcca tcgctggggg 1620 tcctgtagcg agtctggaaa tgactccaac tctgaatggg aagattttct gcacgccttc 1680 tatgaagaag aagagaactt taaaatctcc catgctgaca caagagagaa ttcacgaact 1740 catgcaagca gtcctgaaaa tagcttgcaa aaaggagatg aatgtagagc tagtaggcaa 1800 gaaatccaca agaggccaat acaagaaatt tcaaggagca aagcatttgt tccttcattt 1860 aaaacatatg aaaggcctca gagaatcagt ggacttaaga gttcatccaa caattcaaga 1920 tatcgtactg caagccgcca aggttggggc atgggagaag ttaataaaga cagtaacatt 1980 atccaaaggt tcaagtggtc tagttatgaa cccagacaag ctgctaggtc ctcggggtca 2040 cgcaccacaa ggaatgttcg tggtacgtgg ggctttcaaa ggagtgttgt acgacgcacg 2100 gatgaagctt ggtaggtctg tcctaccata tatcactcag tttagctcca acatggaaag 2160 gtttttgtta ggctttgata gtaagtttaa acagatgaga cagatagatg tggaccacgt 2220 gtgtgaatca aattatgatg ctgagcaggc aggagctgta gcagctataa cacatcacat 2280 gctttatcca atgggaagaa ctacttgtaa atcttgtata aataatatag aagacatgag 2340 tagagaggag tggtgtgaat atgttaagtc ttttatcaat aaaaataaaa tattgagtca 2400 gtctgattat aaagattttg tacatttacc tcaaataatg gactttctat ctgagtcact 2460 tgtaaataca aataaaaact taaaggcgtt caatgaaatt caaagcctca ttggcgatag 2520 aaatgacgca ccttttataa atgtttgtga aataaataaa atattagtga aaggcggtcg 2580 tactaaatcc gatgagctaa tcagagcatc tgaaaatctt ttagaattgg ctcgttattt 2640 gaaaaaccgc actgagaaca ttaagaaagg ttcactgcaa tcttttagga ataagatatc 2700 acagaaatct tcagtgaatt tagcattaat gtgtgacaac caactgaatc ac 2752 //