ID AY514630; SV 1; linear; genomic DNA; STD; VRL; 2747 BP. XX AC AY514630; XX DT 25-JAN-2004 (Rel. 78, Created) DT 24-MAR-2005 (Rel. 83, Last updated, Version 2) XX DE Tomato yellow leaf curl Thailand virus strain Chiang Mai segment A, DE complete sequence. XX KW . XX OS Tomato yellow leaf curl Thailand virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2747 RX DOI; 10.1016/j.virusres.2004.10.001. RX PUBMED; 15826907. RA Sawangjit S., Chatchawankanphanich O., Chiemsombat P., Attathom T., RA Dale J., Attathom S.; RT "Molecular characterization of tomato-infecting begomoviruses in Thailand"; RL Virus Res. 109(1):1-8(2005). XX RN [2] RP 1-2747 RA Sawangjit S., Chatchawankanphanich O., Chiemsombat P., Attathom T., RA Dale J.L., Attathom S.; RT ; RL Submitted (30-DEC-2003) to the INSDC. RL Plant Pathology, Kasetsart University, Malaiman, Kamphaengsaen, Nakhon RL Pathom 73140, Thailand XX DR MD5; d6777a620adfe9f2a0e7e37af5f93cd6. DR EuropePMC; PMC2224568; 17977971. XX FH Key Location/Qualifiers FH FT source 1..2747 FT /organism="Tomato yellow leaf curl Thailand virus" FT /segment="A" FT /strain="Chiang Mai" FT /mol_type="genomic DNA" FT /country="Thailand" FT /db_xref="taxon:85752" FT gene 275..622 FT /gene="AV2" FT CDS 275..622 FT /codon_start=1 FT /gene="AV2" FT /product="precoat protein" FT /db_xref="GOA:Q6R4E1" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q6R4E1" FT /protein_id="AAR98584.1" FT /translation="MWDPLLNEFPENVHGFRCMLAVKYLQAVEKTYSPDTLGFDLIRDL FT ISVIRAKNYVEASSRYSHFHARLESTSPSELRQPIQQPCCCPHCPRHKRADMEEPTCIQ FT KTQVLQNVQKP" FT gene 435..1205 FT /gene="AV1" FT CDS 435..1205 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:Q6R4E0" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q6R4E0" FT /protein_id="AAR98583.1" FT /translation="MSKRPADILISTPVSKVRRRLNFDSPYNSRAAVPTVRVTKGQIWK FT NRPAYRKPRFYRMYRSPDVPKGCEGPCKVQSFDAKNDIGHMGKVICLSDVTRGIGLTHR FT VGKRFCVKSLYFVGKIWMDENIKVKNHTNTVLFWIVRDRRPTGTPYDFQQVFNVYDNEP FT STATVKNDQRDRFQVIRRFQATVTGGQYAAKEQAIIRKFYRVNNYVVYNHQEAGKYENH FT TENALLLYMACTHASNPVYATLKVRSYFYDSVTN" FT gene complement(1202..1606) FT /gene="AC3" FT CDS complement(1202..1606) FT /codon_start=1 FT /gene="AC3" FT /product="REn protein" FT /db_xref="GOA:Q6R4D9" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q6R4D9" FT /protein_id="AAR98587.1" FT /translation="MDSRTGELLTATQSESGVYIWTVKNPLYFKITRHLESPFQRNHDI FT ITLQIQFNYNLRKALGIHKCFLVCKIWTHLHSQTSRFLRVFKYQCIKYLDRLGVISINN FT VIRAISHILYNVLEGTICVIEKHDIKFNIY" FT gene complement(1347..1751) FT /gene="AC2" FT CDS complement(1347..1751) FT /codon_start=1 FT /gene="AC2" FT /product="TrAP protein" FT /db_xref="GOA:Q6R4D8" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q6R4D8" FT /protein_id="AAR98586.1" FT /translation="MRSSSPSKAHSTQVPIKVQHRIAKRTTRRRRVDLPCGCSYFVAIG FT CHNNGFTHRGTTHCNSIREWRIYLDGQKSPVFQDNQAPREPIPEEPRHNHVTNPVQLQP FT EESVGDTQMFSSLQNLDSFTFSDLAFLKSI" FT gene complement(1654..2739) FT /gene="AC1" FT CDS complement(1654..2739) FT /codon_start=1 FT /gene="AC1" FT /product="Rep protein" FT /db_xref="GOA:Q6R4D7" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q6R4D7" FT /protein_id="AAR98585.1" FT /translation="MAPPNKFRINAKHYSLTYPHCSLTKEEALSQIQALETPTNKLFIR FT ICRELHEDGTPHLHVLIQFEGKFQCKNQRFFDLTSPTRSAHFHPNIQGAKSSTDVKSYM FT EKDGDVLDHGIFQIDGRSARGGCQSANDAYAEAINSGSKASALNILREKAPKDFVLQFH FT NLNSNLDRIFTPPIEEYISPFSSSSFNQVPEELDEWACNNVLSAAARPLRPMSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYNNDAWFNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEYLEEEKNSALRNWAIKNAIFVTLQGPL FT YSSTYQGATPNSQEDNQTTES" FT gene complement(2289..2582) FT /gene="AC4" FT CDS complement(2289..2582) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q6R4D6" FT /protein_id="AAR98588.1" FT /translation="MGLLTCMSSSNSKENSSVKIKDSSISHPQPGQHISIRTFRELKAQ FT QMLNHTWKKTETCLIMEFSRSMEDRLEEVANLPTTHMPRQSIQGPKLRPSIY" XX SQ Sequence 2747 BP; 733 A; 552 C; 602 G; 860 T; 0 other; ggtcaatcgg tgtctctcaa acttggctat gcaatcggtg tctggtgtct tatttatacc 60 tagacaccaa atggcattat tgtaatttag tacatgaaat tcaaaattca aaatccaatc 120 gtggccatcc gtataatatt accggatggc cgcgattttt tttaaagtgg tccccttgat 180 gtgacgtctc atccaataag aacgctccct caaagcttaa ttatttatgg tcccctatat 240 aagacttagt ccccaagttt cggcgaaatt caaaatgtgg gatccactcc taaacgaatt 300 tcctgaaaac gtccacggtt tccgttgtat gctagccgtg aagtatctgc aagcggtcga 360 gaagacgtat tcccctgata ccctagggtt tgatctcatc cgtgatctca tcagtgtaat 420 tcgtgcgaag aactatgtcg aagcgtccag cagatattct catttccacg cccgtctcga 480 aagtacgtcg ccgtctgaac ttcgacagcc catacaacag ccgtgctgct gtccccactg 540 tccgcgtcac aaaagggcag atatggaaga accgacctgc atacagaaaa cccaggttct 600 acagaatgta cagaagccct gatgtcccta agggatgtga aggcccatgc aaggtccaat 660 ctttcgatgc gaagaacgat attggtcata tgggtaaggt gatctgtttg tctgacgtta 720 ctcgtggtat tgggcttact catcgagttg gcaagcgttt ctgtgtcaag tcactttatt 780 tcgttggcaa gatatggatg gatgaaaata ttaaggttaa gaatcacact aacaccgttt 840 tgttttggat agttagggat cggcgtccta ctggaacgcc ttatgatttt cagcaggtct 900 ttaatgtata tgataatgaa cctagcactg ctactgtgaa gaacgatcag cgtgatcgtt 960 tccaggttat aaggaggttc caggcaactg ttactggtgg acaatatgca gctaaggagc 1020 aggcgattat tagaaagttt tatcgtgtta acaattatgt agtttacaat caccaggaag 1080 ctgggaagta cgagaaccat actgaaaatg ctctgttgtt gtatatggca tgtactcatg 1140 cctctaatcc tgtgtatgct actttgaaag tcaggagtta tttctacgac tcagtgacga 1200 attaataaat attaaatttt atatcatgtt tttcaattac acaaattgtt ccttctaata 1260 cattgtacaa tatatgagat attgccctaa ttacattgtt tatactaatc acgcctaatc 1320 tatctaaata tttaatacat tgatatttaa atactcttaa gaaacgcgag gtctgagaat 1380 gtaaatgagt ccagattttg cagactagaa aacatttgtg tatccccaac gctttcctca 1440 ggttgtaatt gaactggatt tgtaacgtga ttatgtcgtg gttcctctgg aatgggctct 1500 ctaggtgcct ggttatcttg aaatacaggg gatttttgac cgtccagata tatacgccac 1560 tctctgattg agttgcagtg agtagttccc cggtgcgtga atccattatt gtgacagcct 1620 atggcgacga agtacgaaca tccacaaggt agatcaactc tccgtcgtct ggttgtcctc 1680 ttggctattc ggtgttgcac cttgataggt acttgagtag agtgggcctt ggagggtgac 1740 gaagatcgca ttctttatag cccagtttct aagtgcggag ttcttttcct cttccaagta 1800 ctctttatag ctggagtttg gtccaggatt gcagaggaag atagtgggaa ttccgccttt 1860 aatttgaact ggcttgccgt atttggtgtt gctttgccag tccctttggg cccccatgaa 1920 ctctttaaag tgttttagat aatgcggatc aacgtcatcg atgacgttaa accacgcatc 1980 attattatac acttttggac ttaaatctaa atggccacac agataattat gtggtcccaa 2040 tgatctagcc cacatcgtct taccggtcct gctatcaccc tctatgacaa tactcatggg 2100 tctcaaaggc cgcgcagcgg cactgagaac gttattacaa gcccattcat caagttcttc 2160 gggaacttga ttaaaagaag atgaagaaaa aggagaaata tattcctcta ttggaggagt 2220 aaaaatccta tctaaattac tatttaaatt atgaaattgt aaaacaaaat ctttaggtgc 2280 cttttccctt agtatattga gggccgaagc tttggaccct gaattgattg cctcggcata 2340 tgcgtcgttg gcagattggc aacctcctct agccgatctt ccatcgatct ggaaaattcc 2400 atgatcaagc acgtctccgt ctttttccat gtatgattta acatctgttg agcttttagc 2460 tccctgaatg ttcggatgga aatgtgctga cctggttggg gatgtgagat cgaagaatct 2520 ttgattttta cactggaatt ttccttcgaa ttggatgagg acatgcaggt gaggagtccc 2580 atcttcgtgg agttccctgc agattctgat gaataattta ttagttggtg tttctagtgc 2640 ttgaatttgg gaaagtgctt cctctttagt tagagagcag tgtgggtatg tgagagaata 2700 atgcttggca tttattctga atttattagg aggagccatg ttgactt 2747 //