ID   AY340070; SV 1; linear; mRNA; STD; VRL; 752 BP.
XX
AC   AY340070;
XX
DT   10-AUG-2003 (Rel. 76, Created)
DT   02-MAR-2006 (Rel. 87, Last updated, Version 2)
XX
DE   Alfalfa mosaic virus strain NY-A 2002 coat protein mRNA, complete cds.
XX
KW   .
XX
OS   Alfalfa mosaic virus
OC   Viruses; Riboviria; Bromoviridae; Alfamovirus.
XX
RN   [1]
RP   1-752
RX   DOI; 10.1094/PD-90-0203.
RX   AGRICOLA; IND43785976.
RA   Shah D., Dillard H., Mazumdar-Leighton S., Gonsalves D., Nault B.;
RT   "Incidence, spatial patterns, and associations among viruses in snap bean
RT   and alfalfa in New York";
RL   Plant Dis. 90(2):203-210(2006).
XX
RN   [2]
RP   1-752
RA   Mazumdar-Leighton S.;
RT   ;
RL   Submitted (11-JUL-2003) to the INSDC.
RL   Plant Pathology, Cornell University, NYSAES, Geneva, NY 14456, USA
XX
DR   MD5; 07711542464173a0b42d36c7d1f4d229.
DR   RFAM; RF00252; Alfamo_CPB.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..752
FT                   /organism="Alfalfa mosaic virus"
FT                   /strain="NY-A 2002"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:12321"
FT   primer_bind     1..19
FT   CDS             7..672
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q7T448"
FT                   /db_xref="InterPro:IPR002681"
FT                   /db_xref="UniProtKB/TrEMBL:Q7T448"
FT                   /protein_id="AAQ18915.1"
FT                   /translation="MSSSQKKAGGKAGKPTKRSQNYAALRKAQLPKPPALKVPVVKPTN
FT                   TILPQTGCVWQSLGTPLSLSSFNGLGARFLYSFLKDFVGPRILEEDLIYRMVFSITPSH
FT                   AGTFCLTDDVTTEDGRAVAHGNPMQEFPQGVFHANEKFGFELVFTAPTHAGMQNQNFKH
FT                   SYAVALCLDFDAQPEGSKNPSFRFNEVWVERKAFPRAGPLRSLITVGLLDEADDLDRH"
FT   primer_bind     complement(734..752)
XX
SQ   Sequence 752 BP; 179 A; 187 C; 192 G; 194 T; 0 other;
     tccatcatga gttcttcaca aaagaaagct ggtgggaaag ctggtaaacc tactaaacgt        60
     tctcagaact atgctgcttt acgcaaagct caactgccga agcctccggc gttgaaagtc       120
     ccggttgtaa aaccgacgaa tactatactg ccacagacgg gctgcgtgtg gcaaagcctc       180
     gggacccctc tgagtctgag ctcttttaat gggctcggcg cgagattcct ctacagtttt       240
     ctgaaggatt tcgtgggacc tcggatcctc gaagaggatc tgatttacag gatggtgttt       300
     tctataacac cgtcccatgc cggcaccttt tgtctcactg atgacgtgac gactgaggat       360
     ggtagggccg ttgcgcatgg taaccccatg caagaatttc ctcaaggcgt gtttcacgcc       420
     aatgagaagt tcgggtttga gttggtcttc acagctccta cccatgcggg aatgcaaaat       480
     caaaatttca agcattccta tgccgtagcc ctctgtctgg acttcgacgc gcagcctgag       540
     ggatctaaaa atccctcatt ccgattcaac gaagtttggg tcgagagaaa ggcgttcccg       600
     cgagcagggc ccctccgcag tttgattact gtggggctgc tcgacgaagc tgacgatctt       660
     gatcgtcatt gatgtacccc attaatttgg gatgctaaag tcatttaatg ctgacctcca       720
     ctgggtggat taaggtcaag gtatgaagtc ct                                     752
//