ID AY186198; SV 1; linear; genomic DNA; STD; VRL; 4694 BP. XX AC AY186198; XX DT 05-JUN-2003 (Rel. 76, Created) DT 31-AUG-2025 (Rel. 144, Last updated, Version 6) XX DE Avian adeno-associated virus ATCC VR-865, complete genome. XX KW . XX OS Avian adeno-associated virus OC Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Quintoviricetes; OC Piccovirales; Parvoviridae; Parvovirinae; Dependoparvovirus; OC Dependoparvovirus avian1. XX RN [1] RP 1-4694 RX DOI; 10.1128/JVI.77.12.6799-6810.2003. RX PUBMED; 12768000. RA Bossis I., Chiorini J.A.; RT "Cloning of an avian adeno-associated virus (AAAV) and generation of RT recombinant AAAV particles"; RL J. Virol. 77(12):6799-6810(2003). XX RN [2] RP 1-4694 RA Bossis I., Chiorini J.A.; RT ; RL Submitted (22-NOV-2002) to the INSDC. RL National Institute of Dental and Craniofacial Research, National Institutes RL of Health, Building 10, Room 1N112, Bethesda, MD, USA XX DR MD5; 1b685525b64252bc8d809b65ebca0b3b. XX FH Key Location/Qualifiers FH FT source 1..4694 FT /organism="Avian adeno-associated virus" FT /strain="ATCC VR-865" FT /mol_type="genomic DNA" FT /db_xref="taxon:341671" FT repeat_region 1..142 FT /rpt_type=INVERTED FT /note="inverted terminal repeat; ITR" FT gene 244..2232 FT /gene="Rep" FT CDS 244..2232 FT /codon_start=1 FT /gene="Rep" FT /product="rep protein" FT /protein_id="AAO32086.1" FT /translation="MRSYYEVIVQLPNDVESQVPGISDSFVNWITSREWTLPEDADWDL FT DQVDQVQLTLGDKIQREIRTHWGTMAKEPDFHYFIQLEQGEVFFHLHVLLETCSVKPMV FT LGRYIRHIQQKIVSKVYCATSLRWKDGCVVTKTKNFGGANKVRAESYIPAYLIPKQQPE FT VQWAWTNVPEYIKACLHRELRASLARLHFEEAGVSQSKENLARTADGAPVMPTRVSKRY FT MELVDWLVEKGITTEKEWLLENRESFRSFQASSNSARQIKTALQGAIQEMLLTKTAEDY FT LVGKDPVSDDDIRQNRIYKILELNHYDPAYVGSILVGWCQKKWGKRNTLWLFGHATTGK FT TNIAEAIAHAVPFYGCVNWTNENFPFNDCVEKMIIWWEEGKMTAKVVETAKAILGGSRV FT RVDQKCKASVPIEPTPVIITSNTNMCYVIDGNTTTFEHKQPLEDRMFKLELLTRLPDDF FT GKVTKQEVRQFFRWSQDHLTPVIPEFLVRKAESRKRPAPSGEGYISPTKRPALAEQQQA FT SESADPVPTRYRIKCSKHCGMDKMLFPCQICESMNRDINICAIHKTTDCKECFPDYGDK FT DDVELPPCTEHNVSRCYQCHSGELYRVTSDSDEKPAPESDEGTEPSYAPCTIHHLMGKS FT HGLVTCAACRLKNSTLHDDLDDGDLEQ" FT gene 2250..4481 FT /gene="Cap" FT CDS 2250..4481 FT /codon_start=1 FT /gene="Cap" FT /product="capsid protein" FT /protein_id="AAO32087.1" FT /translation="MSLISDAIPDWLERLVKKGVNAAADFYHLESGPPRPKANQQTQES FT LEKDDSRGLVFPGYNYLGPFNGLDKGEPVNEADAAALEHDKAYDLEIKDGHNPYFEYNE FT ADRRFQERLKDDTSFGGNLGKAIFQAKKRVLEPFGLVEDSKTAPTGDKRKGEDEPRLPD FT TSSQTPKKNKKPRKERPSGGAEDPGEGTSSNAGAAAPASSVGSSIMAEGGGGPVGDAGQ FT GADGVGNSSGNWHCDSQWLENGVVTRTTRTWVLPSYNNHLYKRIQGPSGGDNNNKFFGF FT STPWGYFDYNRFHCHFSPRDWQRLINNNWGIRPKAMRFRLFNIQVKEVTVQDFNTTIGN FT NLTSTVQVFADKDYQLPYVLGSATEGTFPPFPADIYTIPQYGYCTLNYNNEAVDRSAFY FT CLDYFPSDMLRTGNNFEFTYTFEDVPFHSMFAHNQTLDRLMNPLVDQYLWAFSSVSQAG FT SSGRALHYSRATKTNMAAQYRNWLPGPFFRDQQIFTGASNITKNNVFSVWEKGKQWELD FT NRTNLMQPGPAAATTFSGEPDRQAMQNTLAFSRTVYDQTTATTDRNQILITNEDEIRPT FT NSVGIDAWGAVPTNNQSIVTPGTRAAVNNQGALPGMVWQNRDIYPTGTHLAKIPDTDNH FT FHPSPLIGRFGCKHPPPQIFIKNTPVPANPSETFQTAKVASFINQYSTGQCTVEIFWEL FT KKETSKRWNPEIQFTSNFGNAADIQFAVSDTGSYSEPRPIGTRYLTKPL" FT repeat_region 4552..4694 FT /rpt_type=INVERTED FT /note="inverted terminal repeat; ITR" XX SQ Sequence 4694 BP; 1209 A; 1312 C; 1229 G; 944 T; 0 other; tggccagttt ccaagacagg ctcgctcgct cactcgggcc ggggccccaa aggggcccct 60 agcgaccgct tcgcggtcgc ggcccgagtg agcgagcgag cctgtcttgg aaactggcca 120 gcactccggt gaggtaatgc cgtcacgtgg tcgggaatgg gaacgggaaa tctcgcgaga 180 acgtaaacaa atataagacg gcgccacacg gcgctgcgtc atacgcgcgc gcgcaccggc 240 gagatgaggt cgtactacga ggtcatcgtt cagctgccca acgacgtcga gagtcaggta 300 cctggaatct ccgattcgtt cgtcaactgg attacgtcgc gagaatggac gttgcctgag 360 gacgccgatt gggatttgga ccaggtcgat caagttcaac tgacgctcgg cgacaaaatc 420 caacgggaga ttcgaactca ttgggggacg atggccaaag aaccggactt tcactatttt 480 atccaactgg aacaaggtga ggtgttcttt catttacacg tcctgctgga aacgtgttcc 540 gtaaagccga tggtactcgg aagatatatc cgacatattc aacaaaaaat tgtgagtaaa 600 gtctactgcg ccacgagcct acgatggaag gatggatgcg tggtgaccaa gaccaaaaat 660 ttcgggggcg cgaacaaggt ccgggccgag tcgtatattc ccgcctacct gatcccgaaa 720 cagcaaccgg aagtgcagtg ggcgtggact aacgtgcccg agtatataaa agcgtgcttg 780 caccgagaac tgcgtgccag tctcgcgcga cttcacttcg aggaggcggg cgtctcgcaa 840 tccaaggaaa atctcgcgag aactgcagac ggcgctcccg tgatgccgac ccgcgtcagc 900 aaacgctaca tggagctcgt ggattggctc gtggagaagg ggatcaccac cgagaaggaa 960 tggctgctgg aaaacagaga aagctttcgg agctttcagg cctcgagcaa ctcggcgcgt 1020 cagatcaaga cggccctgca aggcgccatt caggagatgc ttctgaccaa gacggcggag 1080 gactacctcg tcggaaagga tcccgtctcg gacgacgaca tccgtcagaa ccgcatctac 1140 aagattctgg aactgaacca ctacgaccca gcgtacgtgg ggagtatttt ggtcgggtgg 1200 tgccagaaga aatggggcaa gcgaaacacg ctgtggctgt tcggacatgc gaccaccggc 1260 aagaccaaca tcgcggaggc tattgcccat gctgtgccgt tctatggatg cgttaactgg 1320 accaacgaga actttccgtt caacgactgc gtcgaaaaaa tgattatctg gtgggaggag 1380 ggcaaaatga ccgccaaagt ggtggaaaca gccaaggcga ttctgggagg atctcgggtg 1440 agagtggacc aaaaatgcaa agcttcggtt ccgatcgaac cgacgccggt cattattacc 1500 agtaacacca acatgtgtta tgtcatcgac gggaacacga ccacgttcga gcataagcag 1560 ccgttggagg acaggatgtt taagctcgaa ttgctgactc ggttgcctga tgactttggt 1620 aaggtgacca aacaggaggt gcgtcaattc ttcaggtggt ctcaggatca cctgacccct 1680 gtgatcccag aattcctagt gcggaaggcg gagtctcgca aaagacccgc cccttccggg 1740 gaaggctata taagcccgac aaagcggccc gcgctcgcag agcagcagca ggcgtcggag 1800 agcgcggacc cggttcccac caggtatcgt atcaaatgct cgaaacattg cggtatggat 1860 aaaatgttgt ttccttgcca aatttgtgaa tcgatgaaca gagatattaa tatttgtgct 1920 attcataaaa cgaccgactg taaagagtgt ttccccgact acggggataa agatgatgta 1980 gaactacccc cctgtacaga acacaacgtg tctcgttgtt atcaatgtca ttcgggcgaa 2040 ttgtatcgcg tgacttcgga ctctgacgag aaacctgccc ccgagagtga tgaaggcacc 2100 gagccatcct atgctccctg cacgattcac cacctgatgg gcaagagtca cgggttagtc 2160 acttgcgcgg cgtgtcggtt gaaaaatagt acgttgcatg atgacttgga tgacggtgat 2220 ctcgaacaat aaatgattga aatgtagcca tgtctctcat ttctgatgcg attccagatt 2280 ggttggagcg gttggtcaaa aagggagtga atgctgcagc tgatttctac catttggaaa 2340 gcggtcctcc tcgtcctaag gcaaatcagc aaactcaaga atctcttgaa aaggacgatt 2400 cgagaggtct cgtgttccca ggctacaatt atctaggccc tttcaacggt ctagataaag 2460 gagaacccgt caacgaggca gacgctgccg ccttagaaca cgacaaggct tacgacctcg 2520 aaatcaagga cgggcacaac ccgtactttg agtacaacga ggccgacaga cgtttccagg 2580 aacgtctcaa agacgatacc tcctttggag gcaatttagg taaagccatc ttccaggcca 2640 aaaagagggt tctcgaaccc tttggtctgg tggaagactc aaagacggct ccgaccggag 2700 acaagcggaa aggcgaagac gaacctcgtt tgcccgacac ttcttcacag actcccaaga 2760 aaaacaagaa gcctcgcaag gaaagacctt ccggcggggc agaagatccg ggcgaaggca 2820 cctcttccaa cgctggagca gcagcacccg cctctagtgt gggatcatct atcatggctg 2880 aaggaggtgg cggcccagtg ggcgatgcag gccagggtgc cgatggagtg ggcaattcct 2940 ccggaaattg gcattgcgat tcccaatggc tggaaaacgg agtcgtcact cgaaccaccc 3000 gaacctgggt cttgcccagc tacaacaacc acctgtacaa acgaatccaa ggacccagcg 3060 gaggcgacaa caacaacaaa ttctttggat tcagcacccc ctggggatac tttgactaca 3120 atcgattcca ctgccacttt tccccgcgag actggcaacg actcatcaac aacaactggg 3180 gcatccgtcc caaagcgatg cgctttagac tctttaacat ccaggttaaa gaggtcacgg 3240 tccaagactt caacaccacc atcggcaaca acctcaccag tacggtccag gtctttgcgg 3300 acaaggacta ccaactgccg tacgtcctcg gatcggctac cgaaggcacc ttcccgccgt 3360 tcccagcgga tatctacacg atcccgcagt acgggtactg cacgctaaac tacaacaacg 3420 aggcggtgga tcgttcggcc ttctactgtc tggactactt tccctcagac atgctgcgga 3480 caggaaataa ctttgagttt acttacacct tcgaggacgt tcctttccat agcatgtttg 3540 cccacaacca gacgctagac cggctgatga atcccctcgt ggatcagtac ctctgggctt 3600 tcagctccgt cagccaagca ggctcatctg gacgagctct tcattactcg cgggcgacta 3660 aaaccaacat ggcggctcaa tataggaact ggttacctgg gcctttcttc cgtgatcagc 3720 aaatctttac gggcgctagc aacatcacta aaaataacgt ctttagcgtt tgggaaaaag 3780 gcaagcaatg ggaactcgac aatcggacca acctaatgca gcccggtcct gcggcagcga 3840 ccacctttag cggagaacct gaccgtcaag ccatgcaaaa cacgctggct tttagcagga 3900 ccgtctacga tcaaacgacc gccacgaccg atcgtaacca gatactcatc accaacgaag 3960 acgaaatcag acccaccaac tcggtcggta tcgacgcgtg gggagcagtt cccaccaaca 4020 accagtcgat cgtgaccccc ggcactcgcg cggccgtcaa caatcaaggg gcgcttcccg 4080 ggatggtgtg gcaaaacaga gacatttacc ctacagggac ccatttggcc aaaattcccg 4140 acactgacaa tcacttccat ccgtccccgc ttattgggcg gtttggctgc aagcatcccc 4200 ctccccagat tttcattaaa aacacacccg tccctgccaa cccttcggaa acgttccaga 4260 cggccaaagt ggcctccttc atcaaccagt actcgaccgg acagtgcacc gtcgaaatct 4320 tttgggaact caagaaggaa acctccaagc gctggaaccc cgaaatccag ttcacctcca 4380 actttggcaa cgcggccgac atccagtttg ccgtctccga cacgggatcc tattccgaac 4440 ctcgtcccat cggtacccgt taccttacca aacctctgta aattaaaccc ttcaataaac 4500 cgtttatgcg taactgtatt tccgtctcct gtcgttattc agtcacatga tgcggcatta 4560 cctcaccgga gtgctggcca gtttccaaga caggctcgct cgctcactcg ggccggggcc 4620 ccaaaggggc ccctagcgac cgcttcgcgg tcgcggcccg agtgagcgag cgagcctgtc 4680 ttggaaactg gcca 4694 //