ID AM886130; SV 1; linear; genomic DNA; STD; VRL; 2609 BP. XX AC AM886130; XX DT 01-DEC-2007 (Rel. 94, Created) DT 08-APR-2008 (Rel. 95, Last updated, Version 2) XX DE Abutilon mosaic virus DNA-B south africa isolate, complete genome XX KW C1 gene; MP; NSP; V1 gene. XX OS Abutilon mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2609 RA Lefeuvre P.; RT ; RL Submitted (13-SEP-2007) to the INSDC. RL Lefeuvre P., AMIS, CIRAD - UMR PVBMT, 7 Chemin de l'IRAT, Ligne Paradis, RL Saint Pierre, 97410, REUNION. XX RN [2] RX DOI; 10.1016/j.jviromet.2007.12.014. RX PUBMED; 18280590. RA Shepherd D.N., Martin D.P., Lefeuvre P., Monjane A.L., Owor B.E., RA Rybicki E.P., Varsani A.; RT "A protocol for the rapid isolation of full geminivirus genomes from dried RT plant tissue"; RL J. Virol. Methods 149(1):97-102(2008). XX DR MD5; d2b6fad8953ee715019858b58e406524. XX FH Key Location/Qualifiers FH FT source 1..2609 FT /organism="Abutilon mosaic virus" FT /mol_type="genomic DNA" FT /country="South Africa:Cape Town" FT /isolation_source="Abutilon pannosum" FT /collection_date="17-Jul-2007" FT /note="DNA-B" FT /db_xref="taxon:10815" FT CDS 392..>586 FT /gene="V1" FT /product="NSP" FT /note="premature stop codon in the sequence (frameshift due FT to the deletion of one nucleotide)" FT /db_xref="UniProtKB/TrEMBL:A9JPX8" FT /protein_id="CAP07288.1" FT /translation="MYPSRNKRGSYFNQRRHYSRNHVWKRPTAAKRHDWKRRPLNTSKP FT NDEPKCQPNAYMRISMGLSL" FT CDS complement(1219..2100) FT /gene="C1" FT /product="MP" FT /db_xref="GOA:A9JPX9" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:A9JPX9" FT /protein_id="CAP07289.1" FT /translation="MDSQLVNPPNAFNYIESHRDEYQLSHDLTEIILQFPSTAAQLTAR FT LSRSCMKIDHCVIEYRQQVPINATGTVIVEIHDKRMTDNESLQASWTFPIRCNIDLHYF FT SASFFSLKDPIPWKLYYRVCDTNVHQRTHFAKFKGKLKLSTAKHSVDIPFRAPTVRILS FT KQFTEKDVDFSHVDYGKWERKPIRCASMSRIGLRGPIEIRPGESWASRSTIGTAQSDAD FT SEVENELHPYRHLNRLGTSVLDPGPSASIVGAQREESNITMSMGQLNELVRTTVQECIN FT NNCQASQAKSLK" XX SQ Sequence 2609 BP; 646 A; 562 C; 647 G; 754 T; 0 other; accggatggc cgcgcccccc cccctcctgg tgctgcactg gcacgcgctc caccctggtg 60 ccgtgctctc acgcgctctc ccattggtgc gggtccttca cgctcttctt ttgagttgcc 120 tttaatttga attaaaggtt tgtactttct cgcgcgacgt gctttattat ttgaattgtt 180 gtcgcgcgaa gactgaatat ggaccattgt acctggtgaa ggacgtgtcc aaacttggac 240 cttgctgctg agtctaattg tgattaatgg tggaccatcc acctatatat tgggtccgat 300 aggttgcttt tgtggtaatt gactcagcaa tccaccacgt tttttcgtcc ccgtgtaatc 360 gtgttgtgtt ttcttatatt atcatctgat aatgtacccg tctaggaata aacgtggatc 420 ttactttaat caacgtcgac attattcacg caatcatgtg tggaaacggc caactgctgc 480 gaagagacat gactggaagc gtcgaccttt aaatacgagc aagcccaacg acgagcccaa 540 gtgtcagccc aacgcataca tgagaatcag tatgggcctg agtttgtaat ggcccagaac 600 tcagcaatct cgtcgttcat cagttatcct gacttgggta ggtccgagcc caaccgaagc 660 aggtcctata tcaggttgaa gcaactacgc ttcaaaggga cggtgaagat tgaacaggtt 720 caaacggcga tgaacatgga cggatctacc cccaaagtgg aaggagtgtt ctcccttgtc 780 attgttgtgg atcgtaaacc acaccttggc ccctctggtt gtctacatac atttgacgag 840 ttgtttggtg ctaggataca cagtcatggt aacctcagcg taacccccgc gttgaaagat 900 cgatattaca ttcgccacgt gtgcaaacgt gtcgtatctg tggagaagga tacgctgatg 960 gtagacgtgg aaggatccct tcctctctct aacaggcgtt ttaattgttg ggccacgttt 1020 aaggacgtgg atcgtgagtc atgcaagggt gtttatgata acattagcaa gaacgccctg 1080 ttagtttatt actgctggat gtcggatacg cctgcgaagg cctccacttt tgtatcgttt 1140 gacgttgact atattggtta attgaataaa taaagtattt aaagttgatc atcttatttg 1200 tacaagcaaa acatacaatt atttcaatga tttggcttga gaagcctgac agttattatt 1260 gatacattct tggaccgttg tcctgactaa ttcattcagc tgacccattg acattgtgat 1320 gttggactcc tctctctggg cgcccactat tgacgcagat ggtcctgggt ctagaacgct 1380 ggtacccagc ctgtttaggt gtctgtatgg atggagctcg ttctccacct ctgagtccgc 1440 atctgactgg gctgtaccta tggtgctcct ggaagcccac gattcaccgg gcctaatctc 1500 tattgggcct cgaagtccaa tcctggacat ggacgcgcat ctaatgggct tcctctccca 1560 tttcccatag tccacatggg aaaagtccac gtctttttcg gtgaactgtt tggacagtat 1620 ccttactgtt ggtgcccgga acgggatgtc gactgagtgt ttcgccgtgg acaatttcag 1680 cttccctttg aacttggcga agtgggtccg ctgatgcacg tttgtatcgc agactctgta 1740 gtacaatttc catggaattg ggtctttcag cgagaagaac gaagccgaga aatagtggag 1800 atctatgttg catctgatcg gaaaagtcca cgacgcctgt aaagactcgt tgtccgtcat 1860 tctcttgtcg tggatctcca caatcaccgt cccggtggcg ttgatcggta cttgctgtct 1920 gtattctatg acgcagtgat cgatcttcat gcagctacga ctgagcctag ctgttaactg 1980 agccgccgtg gacggaaatt gcagtattat ctcagttagg tcatgtgaaa gttgatattc 2040 gtcacggtgt gactcgatgt agttgaaggc gttgggagga tttactaact gagaatccat 2100 ttgaagaaga gaggccgcgc agcggaactt gaagcgactg ctgaagttga acagttatga 2160 tgatgattag acctaacaaa tgatgaacaa tcactgttga tcaagaagaa ggtaaataca 2220 aagggctctt ttcttctttt gagaaagaca gaaatgtctg acgtatacct gagcagatgg 2280 aggaggagta actgttgaag agtcgagttg tttgagaaag aaaagagaga tgatgaagaa 2340 tttgagagag atctggaaat gaaagagttt gtatatgaac ccagatcttc tgggttgatg 2400 ggtatttaat tgggaaagtg ttcttctatt tctgagagaa tctatttgtt aaacggtggc 2460 gtttttgtaa taagaagggg tactccagat gagttactcc agtgaggctc ctcaaaacta 2520 gcccatgtaa ttggagtatt ggagtactat atatactaga actctcatta acggattggc 2580 aacacgtggc ggccatccgc tataatatt 2609 //