ID   AM884370; SV 1; circular; genomic RNA; STD; VRL; 1375 BP.
XX
AC   AM884370;
XX
DT   07-JAN-2010 (Rel. 103, Created)
DT   07-JAN-2010 (Rel. 103, Last updated, Version 1)
XX
DE   Nanovirus-like particle, rep gene for replication-associated protein, clone
DE   DK5
XX
KW   rep gene; replication protein.
XX
OS   Nanovirus-like particle
OC   Viruses; Alphasatellitidae; Geminialphasatellitinae;
OC   unclassified Begomovirus-associated alphasatellites.
XX
RN   [1]
RP   1-1375
RA   Shahid M.S.;
RT   ;
RL   Submitted (10-SEP-2007) to the INSDC.
RL   Shahid M.S.,  National Institute for Biotechnology and Genetic Engineering
RL   (NIBGE), P.O. Box 577, Jhang Road, Faisalabad, 38000, PAKISTAN.
XX
RN   [2]
RA   Shahid M.S.;
RT   "DNA 1 is no longer a constant feature of DNA beta component";
RL   Unpublished.
XX
DR   MD5; 0255fcc1ebe3aab594cd8e33a0f25d19.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1375
FT                   /organism="Nanovirus-like particle"
FT                   /host="Sonchus arvensis"
FT                   /mol_type="genomic RNA"
FT                   /country="Pakistan:Faisalabad"
FT                   /clone="DK5"
FT                   /tissue_type="leaf"
FT                   /db_xref="taxon:96892"
FT   CDS             78..1025
FT                   /gene="rep"
FT                   /product="replication protein"
FT                   /function="replication"
FT                   /db_xref="GOA:D2N287"
FT                   /db_xref="InterPro:IPR000605"
FT                   /db_xref="InterPro:IPR003365"
FT                   /db_xref="UniProtKB/TrEMBL:D2N287"
FT                   /protein_id="CAP04953.1"
FT                   /translation="MAAIKSNWWCFTVFFLTATAPDLVTLFENTHVSYACWQEEESPTT
FT                   KRRHLQGYLQLKGQRTLNQVKAIFGDLKPHLEKQRARKTDDARDYCMKEETRVSGPFEF
FT                   GEYCPAGSHKRRQRELVIRSPVRMAEENPSVFRRVKAKIAEEEFQKSAPEIQISNLKSW
FT                   QSRLKTLLDRDPDDRTIIWVYGPTGGEGESTFARDLYRSGSWFYTRGGSADNVAYQYIG
FT                   CLGNNIVFDIPRDKKDYLQYSLIEMFKDRLIVSNKYEPLMAPLINCIHVVVMSNFLPDF
FT                   EKISMDRVHVIPCIPCGVCLKHHSHDIKGDEYLD"
XX
SQ   Sequence 1375 BP; 423 A; 241 C; 320 G; 391 T; 0 other;
     accccgcctc gagaccccga gttagagacc ctccgtacag ttgttcttcg tctcttatat        60
     tattatttct gcgatatatg gctgcaatta agtcaaattg gtggtgtttc acggtcttct       120
     tcctcaccgc taccgcacct gacttggtta ctttgttcga gaacactcac gtgagttatg       180
     cctgctggca agaagaggag tctccgacga cgaaacgtcg ccacctgcaa ggctatctgc       240
     aattgaaggg tcagaggacc ctgaaccagg tgaaggccat atttggggat ttgaagcccc       300
     atcttgagaa acagcgagct cgtaaaacag acgatgctcg cgactattgt atgaaagagg       360
     aaactagggt ttccggcccc tttgaatttg gggaatactg tcctgctggt tctcacaaac       420
     gccgacaaag ggaactcgta attcgatctc cggtgagaat ggcagaggaa aatccgtccg       480
     tattccgacg agtcaaggca aagattgctg aggaagaatt ccagaagagc gctcctgaga       540
     ttcaaatttc aaatttgaaa tcttggcaat cgcgcctgaa gacgctcctt gacagggacc       600
     cagatgaccg cactatcatc tgggtatatg gacccactgg tggggaagga gaatccacct       660
     ttgccaggga cctgtacaga agtgggtcat ggttctatac acgtggagga tctgcagata       720
     atgtagctta ccagtacata ggatgtttag gaaataatat tgtatttgat attcctcgtg       780
     ataagaagga ttatctacaa tatagtttaa tagagatgtt taaggatagg ttaatagtta       840
     gtaataagta cgagcctctt atggccccat taattaattg tattcatgtt gtagttatgt       900
     ctaattttct ccctgatttt gagaagatta gtatggatag ggtccatgta attccttgta       960
     ttccttgtgg tgtttgtctt aaacatcaca gtcatgatat taaaggtgat gaatatttgg      1020
     attaattttg tttctttaaa aaaagaaaga atgaaatgaa aaaaaaaaga agtactgaat      1080
     catattttat tattattaag aaaaataggg ccccgcaggg gcatctgtta aaaaatattt      1140
     tgtttctttt aaaaaagaaa gaatgaaatg aaaaaaaaat tatataaaaa taaaaaatat      1200
     cagggtttat aatgtgggcc atactaagtg cgctagatga gagagaaaat gcaattgggc      1260
     actgtagcaa cacggaggga ctaaagttgt aaatatggaa tgtttgggga ctgttgtgta      1320
     aatatctttg ggtacccagg ctataaataa cacgtcacga ggcgggtgta gtatt           1375
//