ID   AM749401; SV 1; linear; mRNA; STD; VRL; 1197 BP.
XX
AC   AM749401;
XX
DT   09-JUL-2007 (Rel. 92, Created)
DT   09-JUL-2007 (Rel. 92, Last updated, Version 1)
XX
DE   Sugarcane Streak mosaic virus partial mRNA for coat protein (NIb gene),
DE   isolate Co 86032-17
XX
KW   coat protein; NIb gene.
XX
OS   Sugarcane streak mosaic virus
OC   Viruses; Riboviria; Potyviridae; Poacevirus.
XX
RN   [1]
RP   1-1197
RA   Prabu G.R.;
RT   ;
RL   Submitted (07-JUL-2007) to the INSDC.
RL   Prabu G.R., MB & GE Lab, Vasantdada Sugar Institute, Manjari (Bk), Tal.
RL   Haveli, Dist- Pune, Maharashtra 412307, INDIA.
XX
RN   [2]
RA   Prabu G.R., Kawar P.G., Harikrishnan M., Theertha Prasad D.;
RT   "Phytoplasma and virus pathogens associated with Sugarcane Grassy Shoot
RT   disease in India";
RL   Unpublished.
XX
DR   MD5; 7ae7221f74fe4d564beacd73869fe1f6.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1197
FT                   /organism="Sugarcane streak mosaic virus"
FT                   /host="Saccharum officinarum, cultivar Co 86032"
FT                   /isolate="Co 86032-17"
FT                   /mol_type="mRNA"
FT                   /country="India"
FT                   /isolation_source="healthy host's leaves"
FT                   /collected_by="Prabu, G.R."
FT                   /db_xref="taxon:53954"
FT   CDS             <1..1007
FT                   /codon_start=3
FT                   /gene="NIb"
FT                   /product="coat protein"
FT                   /db_xref="GOA:A6Q0Q1"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:A6Q0Q1"
FT                   /protein_id="CAO77710.1"
FT                   /translation="SKHTGKEGFLMDIDKVTALYLTDEVRIDPVPTDLLVFHSGEEALI
FT                   YHAAVGEQGTQPGLNQSTSASTVSSTSATTTSQAGSQTTGNLTNTVSQTMRSLYVPPLV
FT                   KSLKTEAKAKQMMRYTPPQALISSSAASIRQFNDWANTAAEGYGKTIQQFTDEILPFWI
FT                   YWCVVNGATEENKTKPKWTKAVLNLDGADGTEITVDENGPQVEFEMGPMYRNAKPGIRA
FT                   IMRHFGELAYKWVQFSVRSGKPIIPHNAVKAGLTTPEFYPCCIDFVMVNILSPAEIDVR
FT                   NQVINARTPRMGKPLFRHALRAGGDEDTDLRREDDANYGRTQIGGAHFGRAQH"
XX
SQ   Sequence 1197 BP; 350 A; 275 C; 306 G; 266 T; 0 other;
     ggagtaagca tacagggaaa gaggggttcc tcatggacat cgacaaggtc acagctctct        60
     atctcacaga tgaagtaaga attgaccctg tgccaacaga cttgcttgtg ttccattcag       120
     gagaagaagc cttaatttat cacgctgctg ttggggaaca aggaacacaa cccggattga       180
     accagagcac ttcggcttct acggtgtcga gcacatcagc taccacaaca agtcaagcag       240
     gaagtcaaac aacagggaac ttaaccaaca cagtttcaca aacgatgagg tctctatacg       300
     taccaccact ggttaagtca ctcaaaacgg aggccaaggc aaagcagatg atgaggtaca       360
     caccaccaca ggcacttata tcttcatcgg ccgcatcaat acggcagttc aatgattggg       420
     caaacacagc ggctgaaggg tatggaaaaa caattcaaca gttcacggat gagatactcc       480
     ccttttggat ctattggtgt gttgtcaacg gtgcaactga agagaacaag acaaagccaa       540
     agtggacgaa agctgtgttg aatctagatg gagcagatgg cacagagatt accgtggatg       600
     aaaacggacc ccaagtggag tttgaaatgg ggccgatgta cagaaacgcc aaacctggta       660
     ttcgcgcgat tatgagacat tttggcgaat tggcgtacaa gtgggttcag ttctcggttc       720
     gtagcgggaa acccataata ccacacaatg cagtgaaggc aggattgaca acaccagagt       780
     tttatccttg ctgcattgat ttcgtgatgg tgaacatcct ctcaccagca gaaatcgacg       840
     tgcgtaacca ggtaattaac gcacgcacac cccggatggg aaagccttta ttccgtcatg       900
     ctcttagagc cgggggagat gaggacacgg acctgcgtag ggaagatgat gcaaactatg       960
     gaaggacgca gatcggtggc gctcattttg ggcgcgccca gcactgattt tcagtgcagt      1020
     tatccatata ttatcgtatc tacgtatcaa ttggttctct tggataggct gatggtagtt      1080
     gcctgaccgc ttagtcgatc atcaggagct actagtggat cattcggaga ttgctcaccc      1140
     tgtttccaga ccagtgagat tctgccgaac ccacaatcaa cctgcccagt gaggagg         1197
//