ID AM711116; SV 1; linear; genomic DNA; STD; VRL; 1374 BP. XX AC AM711116; XX DT 08-DEC-2009 (Rel. 103, Created) DT 07-SEP-2010 (Rel. 106, Last updated, Version 2) XX DE Cotton leaf curl virus-1 (Shadadpur Sindh) rep gene for replication DE associated protein, clone DSC XX KW rep gene; replication associated protein. XX OS Cotton leaf curl virus-1 (Shadadpur Sindh) OC Viruses; Geminiviridae; Begomovirus; unclassified Begomovirus. XX RN [1] RP 1-1374 RA Shahid M.S.; RT ; RL Submitted (07-MAY-2007) to the INSDC. RL Shahid M.S., PBD, NIBGE, Jhang Road Faisalabad, P.O. Box 577 Pakistan, 577, RL PAKISTAN. XX RN [2] RX DOI; 10.1016/j.virusres.2010.07.003. RX PUBMED; 20621137. RA Amrao L., Akhter S., Tahir M.N., Amin I., Briddon R.W., Mansoor S.; RT "Cotton leaf curl disease in Sindh province of Pakistan is associated with RT recombinant begomovirus components"; RL Virus Res. 153(1):161-165(2010). XX DR MD5; 1f66e9a207051f57402707e48317766a. XX FH Key Location/Qualifiers FH FT source 1..1374 FT /organism="Cotton leaf curl virus-1 (Shadadpur Sindh)" FT /mol_type="genomic DNA" FT /country="Pakistan:Shadadpur Sindh" FT /clone="DSC" FT /tissue_type="leaf" FT /db_xref="taxon:442494" FT CDS 77..1024 FT /transl_table=1 FT /gene="rep" FT /product="replication associated protein" FT /db_xref="GOA:D1YST2" FT /db_xref="InterPro:IPR000605" FT /db_xref="InterPro:IPR003365" FT /db_xref="UniProtKB/TrEMBL:D1YST2" FT /protein_id="CAM97882.1" FT /translation="MPTIQSQWWCFTVFFLSATAPDLVPLFENTHVSYACWQEEESPTT FT RRRHLQGYLQLKGKRSLAQVKALFGDRNPHLEKQRARKTDEARDYCMKEETRVSGPFEF FT GEYTAAGSHKRRQRESVIRSPVRMAEENPSVFRRVKAKIAEEYFQKTANEIQISNLKSW FT QLRLMTLLERDPDDRTIFWVYGPDGGEGKSTFARDLYRSGTWFYTRGGSADNVAYQYIG FT CLGNNIVFDIPRDKKDYLQYSLIEMFKDRLIVSNKYEPLMAPLINCTHVVVMSNFLPDF FT EKISVDRVHVIPCRPCGVCSKHHNINDNCEDYSD" XX SQ Sequence 1374 BP; 412 A; 268 C; 309 G; 385 T; 0 other; acccagcctc ggttccctct cctcggttcc ctcgtgcctt tcacgtgctc tctctcttct 60 gtgttcttaa ttgaatatgc ctactattca gtcacaatgg tggtgtttta ctgtcttctt 120 cctttctgcg accgcccccg acctggtgcc tctcttcgag aacacccacg ttagttacgc 180 ctgctggcaa gaggaagagt ctcccacgac tcgacgtcgc catttgcagg ggtatctcca 240 attgaagggg aaaagaagtc tcgcacaggt taaggcgttg tttggtgacc gcaaccccca 300 tctggagaaa cagcgtgccc gtaagaccga cgaagctcgg gattactgta tgaaagagga 360 aactagggtt tccggccctt ttgaatttgg ggaatatact gctgcaggtt ctcacaaacg 420 ccggcaacga gaatctgtaa ttcgaagtcc ggtgagaatg gctgaggaga atccgtccgt 480 cttccgacga gtcaaggcaa agattgcaga agaatatttc cagaagaccg cgaatgaaat 540 tcaaatttca aatttgaaat cttggcaatt gcgcctgatg acgctcctcg aacgggaccc 600 agatgaccgc actatcttct gggtgtatgg cccagatggt ggagaaggaa aatcaacctt 660 cgcgcgagac ctgtatagaa gtggaacctg gttctataca cgtggaggat ctgcagataa 720 tgtagcttac cagtatatag gatgtttagg aaataatatt gtatttgata tccctcgtga 780 taagaaggat tatcttcaat acagtttaat agagatgttt aaagataggt taatagttag 840 taataagtat gagcctctta tggccccttt aattaattgt acccatgtag tagttatgtc 900 taattttctc ccagactttg agaagattag cgtagatcga gtccatgtaa tcccttgtag 960 accttgtggt gtttgttcta aacaccacaa tattaatgat aattgtgagg attattcgga 1020 ttaaacaatt ttgtttcttg aaaacaagaa agaatgaaat gaaaaaaaat aaagaaaaaa 1080 catgagcctt ctattatttc aagataaaac gttgccgcgc agcggcattc aaaaaaaaag 1140 ataaataaaa aaagaatata aaatatattt attatgtctt attaaaacga tgacgtattg 1200 aataaagtga tttgggacta aaatgcaaat attgtaaact tgcgtgcttg cggagcaaaa 1260 cttgagaaag atgcggttaa gcggagtaaa tataaaagtc ttcaggggta tgcgcttgca 1320 atttgccggg atcctaggtt ataaataaca cgtcaccgag gctggtgtag tatt 1374 //