ID AM502339; SV 1; circular; genomic DNA; STD; VRL; 2780 BP. XX AC AM502339; XX DT 17-JUN-2007 (Rel. 92, Created) DT 17-JUN-2007 (Rel. 92, Last updated, Version 1) XX DE African cassava mosaic virus DNA-A, clone 22-ug56b5 XX KW AC1 gene; AC2 gene; AC3 gene; AC4 gene; AV1 gene; AV2 gene; coat protein. XX OS African cassava mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2780 RA Stanley J.; RT ; RL Submitted (16-MAR-2007) to the INSDC. RL Stanley J., Department of Disease and Stress Biology, John Innes Centre, RL Colney Lane, Norwich NR74 7UH, UNITED KINGDOM. XX RN [2] RA Sserubombwe W.S., Briddon R.W., Baguma Y.K., Ssemakula G.N., Bull S., RA Bua A., Otim-Nape G.W., Stanley J.; RT "Diversity of begomoviruses associated with mosaic disease of cultivated RT cassava (Manihot esculenta Cranz) and its wild relative (Manihot glaziovii) RT in Uganda."; RL Unpublished. XX DR MD5; f23cc58e687c0b684db6a29214607afd. XX FH Key Location/Qualifiers FH FT source 1..2780 FT /organism="African cassava mosaic virus" FT /mol_type="genomic DNA" FT /country="Uganda:Mpigi" FT /clone="22-ug56b5" FT /db_xref="taxon:10817" FT CDS 135..476 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:A6H318" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:A6H318" FT /protein_id="CAM59423.1" FT /translation="MWDPLVNEFPDSVHGLRCMLAIKYLQALEDTYEPSTLGHDLVRDL FT VSVIRARNYVEATRRYHHFHSRLQGSSKTELRQPIQEPCYCPHCPRHKSKTGLDEQAHV FT QKAHDVQDV" FT CDS 295..1071 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:Q77FV0" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q77FV0" FT /protein_id="CAM59424.1" FT /translation="MSKRPGDIIISTPGSKVRRRLNFDSPYRNRATAPTVHVTNRKRAW FT MNRPMYRKPMMYRMYRSPDIPRGCEGPCKVQSFEQRDDVKHLGICKVISDVTRGPGLTH FT RVGKRFCIKSIYILGKIWMDENIKKQNHTNNVIFYLLRDRRPYGNAPQDFGQIFNMFDN FT EPSTATIKNDLRDRFQVLRKFHATVVGGPSGMKEQALVKRFYRLNHHVTYNHQEAGKYE FT NHTENALLLYMACTHASNPVYATLKIRIYFYDSIGN" FT CDS complement(1068..1472) FT /gene="AC3" FT /product="AC3 protein" FT /db_xref="GOA:A6H326" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:A6H326" FT /protein_id="CAM59425.1" FT /translation="MDLRTGELITAPQAMNGVYTWEINNPLYFTITRHQNRPFLLNQDI FT ITVQVRFNHNLRKELGIHKCFLNFKIWTTLQPQTGLFLRVFRYQVLKYLDNIGVISIND FT VIRAADHVLFNVIAKTIECQLTHEIKFNVY" FT CDS complement(1213..1620) FT /gene="AC2" FT /product="AC2 protein" FT /db_xref="GOA:A6H327" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:A6H327" FT /protein_id="CAM59426.1" FT /translation="MQSSSPSQNHSTQVPIKVNHRQFKKRAIRRRRVDLVCGCSYYLHI FT NCSNHGFTHRGTHHCSSSNEWRVYLGNKQSPVFHNNQAPKPTIPAEPGHHNSPGSIQSQ FT PEEGAGDSQMFSQLQDLDDLTASDWSFLKGL" FT CDS complement(1529..2605) FT /gene="AC1" FT /product="AC1 protein" FT /db_xref="GOA:A6H328" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:A6H328" FT /protein_id="CAM59427.1" FT /translation="MRTPRFRIQAKNVFLTYPKCSIPKEHLLSFIQTLSLPSNPKFIKI FT CRELHQNGEPHLHALIQFEGKITITNNRLFDCVHPSCSTSFHPNIQGAKSSSDVKSYLD FT KDGDTVEWGQFQIDGRSARGGQQSANDAYAKALNSGSKSDALNVIRELVPKDFVLQFHN FT LNSNLDRIFQEPPAPYVSPFPCSSFDQVPVEIEEWVADNVRDSAARPWRPNSIVIEGDS FT RTGKTIWARSLGPHNYLCGHLDLSPKVFNNAAWYNVIDDVDPHYLKHFKEFMGSQRDWQ FT SNTKYGKPVQIKGGIPTIFLCNPGPTSSYKEFLDEEKQEALKAWALKNAIFITITEPLY FT SGSNQSQSQTIQEASHPA" FT CDS complement(2161..2571) FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:A6H329" FT /protein_id="CAM59428.1" FT /translation="MSFSHTQSVLYPKNTYCHSFKHSLSHQTLSSLKSVESCIRMGNLT FT CMPSSNSRVKSRLRTIVSSIVYTQAVAPVSTPTFKVPNQAQMSSPIWIRTETPSNGDNF FT RSMDDLLEAVNNQRMMLTPKRLTAAVSQTLLM" XX SQ Sequence 2780 BP; 743 A; 555 C; 684 G; 798 T; 0 other; accggttggc cccgcccccc ttaatgtggt ccccgcgcac atacgtatgt cggccaatca 60 tgttttagcg ttaaaggtta tgtattagtg gtgggccact atatacttgc aggcgaagtt 120 gtggctagtg cgcaatgtgg gatccactgg tgaatgagtt tccagactcg gtgcatgggc 180 ttagatgtat gcttgcaatt aaatatctgc aggccttaga ggatacatac gagcccagta 240 ctttgggcca cgatttggtt agggatctag tctcagttat cagggctcgt aattatgtcg 300 aagcgaccag gcgatatcat catttccact ccaggctcca aggttcgtcg aagactgaac 360 ttcgacagcc catacaggaa ccgtgctact gcccccactg tccacgtcac aaatcgaaaa 420 cgggcctgga tgaacaggcc catgtacaga aagcccatga tgtacaggat gtatagaagc 480 ccagacatac ctaggggctg tgaaggccca tgtaaggtcc agtcgtttga gcagagggat 540 gatgtgaagc accttggtat ctgtaaggtg attagtgatg tgactcgtgg gcctgggctg 600 acacacaggg tcggaaagag gttttgtatc aagtccattt acattcttgg taagatctgg 660 atggatgaaa atattaagaa gcagaatcac acgaataatg tgatttttta tctgcttagg 720 gatagaaggc cttatggcaa tgcgccccaa gactttgggc agatatttaa catgtttgat 780 aacgagccca gtactgcaac aattaagaac gatttgaggg acaggtttca ggtgttgagg 840 aaatttcatg ccactgttgt tggtggtcca tctggcatga aggagcaggc gttggtgaaa 900 aggttttaca ggttgaacca tcacgtgaca tataatcatc aggaggcagg gaagtatgag 960 aatcacacag agaatgcttt gcttctgtat atggcatgta ctcatgcctc caatcctgta 1020 tatgcgacgt tgaaaatacg tatatacttt tatgacagta ttggcaatta ataaacattg 1080 aattttattt catgagtcaa ctgacattca atagttttgg caattacatt gaacaaaaca 1140 tgatcagcag ctctaattac atcgttaatt gagataacac ctatattatc caagtattta 1200 agtacttggt atctaaagac ccttaagaaa agaccagtct gaggctgtaa ggtcgtccag 1260 atcttgaagt tgagaaaaca tttgtgaatc cccagctcct tcctcaggtt gtgattgaat 1320 cgaacctgga ctgttatgat gtcctggttc agcaggaatg gtcggttttg gtgcctggtt 1380 attgtgaaat acaggggatt gtttatttcc caggtataca cgccattcat tgcttgagga 1440 gcagtgatga gttcccctgt gcgtaaatcc atgattggag cagttgatat ggaggtaata 1500 tgaacagcca cagacaagat ccactcgtct acgccggatg gctcgcttct tgaattgtct 1560 gtgattgact ttgattggaa cctgagtaga gtggttctgt gatggtgatg aagattgcat 1620 tctttaatgc ccaggccttt agcgcttctt gcttttcctc gtctaggaac tctttatagg 1680 acgaggtagg tcctggattg cagaggaaga tagtgggaat tccaccttta atttgaacgg 1740 gtttcccgta tttcgtgttg gactgccagt ccctctggga ccccatgaat tctttgaagt 1800 gtttgaggta gtggggatcg acgtcatcaa tgacgttgta ccaggcggca ttattgaaga 1860 cctttggact aaggtccagg tgtccacaca ggtaattatg tgggcctaaa gatctggccc 1920 atatcgtctt ccctgttctg ctatcacctt ctatgacaat actattgggt ctccacggcc 1980 gcgcagcgga atccctaaca ttatcagcga cccattcttc aatttcaaca ggaacttggt 2040 caaaggaaga acatgggaag ggagaaacat aaggagctgg tggctcctgg aaaatcctat 2100 ctaaattact atttagatta tgaaactgaa gtacaaagtc ctttgggact aattccctaa 2160 ttacattaag agcgtctgac ttactgccgc tgttaagcgc tttggcgtaa gcatcattcg 2220 ctgattgttg accgcctcta gcagatcgtc catcgatctg aaattgtccc cattcgacgg 2280 tgtctccgtc cttatccaga taggacttga catctgagct tgatttggca ccttgaatgt 2340 tggggtggaa actggtgcta cagcttgggt gtacacaatc gaagagacga ttgttcgtaa 2400 tcgtgatttt accctcgaat tggatgaggg catgcaagtg aggttcccca ttctgatgca 2460 gctctctaca gattttaatg aacttagggt ttgatgggag agagagtgtt tgaatgaatg 2520 acagtaggtg ttctttgggt atagaacact ttgggtatgt gagaaagaca ttcttggctt 2580 gaattctaaa acgaggagtt ctcattttga ccaagtcaat tggagacacc caactagaga 2640 cactcttgag catctcctcc tgttaattgg agacattata taggtgtctc caaatggcat 2700 tcttgtaata agttgaactt taatttgaat taaaaggctc aaaaggcgca gaacacccaa 2760 ggggccaacc gtataatatt 2780 //