ID AM282874; SV 1; circular; genomic DNA; STD; VRL; 2781 BP. XX AC AM282874; XX DT 21-JUN-2006 (Rel. 88, Created) DT 25-SEP-2006 (Rel. 89, Last updated, Version 2) XX DE Tomato yellow leaf curl virus complete viral genome, isolate SH2 XX KW AC1 gene; AC2 gene; AC2 protein; AC3 gene; AC3 protein; AC4 gene; KW AC4 protein; AV1 gene; AV2 gene; AV2 protein; coat protein; KW complete genome; replication-associated protein. XX OS Tomato yellow leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2781 RA Zhou X.P.; RT ; RL Submitted (20-JUN-2006) to the INSDC. RL Zhou X.P., Zhejiang University, Institute of Biotechnology, No. 268, RL Kaixuan Road, Hangzhou, Zhejiang, 310029, CHINA. XX RN [2] RX DOI; 10.1094/PD-90-1359C. RX AGRICOLA; IND43878999. RA Wu J.B.; RT "First Report of Tomato yellow leaf curl virus in China"; RL Plant Dis. 90(10):1359-1359(2006). XX DR MD5; f4cd81b46bbb1a034ddae63fc2626d6c. DR EuropePMC; PMC2074955; 17827315. DR EuropePMC; PMC2816314; 20104645. DR EuropePMC; PMC3325912; 22514670. DR EuropePMC; PMC3540095; 23308130. DR EuropePMC; PMC3586701; 23455639. DR EuropePMC; PMC3714654; 23864010. DR EuropePMC; PMC3718197; 23872717. DR EuropePMC; PMC3791452; 24096821. DR EuropePMC; PMC3877053; 24391779. DR EuropePMC; PMC4050386; 24912756. DR EuropePMC; PMC4122976; 25096549. DR EuropePMC; PMC4249065; 25210181. DR EuropePMC; PMC4448267; 26021483. DR EuropePMC; PMC4964424; 27376280. DR EuropePMC; PMC5082773; 27310765. DR EuropePMC; PMC5124967; 27892529. DR EuropePMC; PMC5495249; 28607073. DR EuropePMC; PMC5703973; 29180745. DR EuropePMC; PMC5741240; 29272279. DR EuropePMC; PMC5771010; 29338737. DR EuropePMC; PMC6030610; 29997607. DR EuropePMC; PMC6174246; 30327608. DR EuropePMC; PMC6366713; 30668603. DR EuropePMC; PMC6367160; 30967015. DR EuropePMC; PMC6400417; 30789967. DR EuropePMC; PMC6413443; 30857562. DR EuropePMC; PMC6504830; 31118898. XX FH Key Location/Qualifiers FH FT source 1..2781 FT /organism="Tomato yellow leaf curl virus" FT /host="Lycopersicon esculentum" FT /mol_type="genomic DNA" FT /country="China:Shanghai" FT /lat_lon="31.22 N 121.40 E" FT /collected_by="Xue-ping Zhou" FT /collection_date="01-Mar-2006" FT /db_xref="taxon:10832" FT CDS 148..498 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:Q2EI17" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q2EI17" FT /protein_id="CAK54961.1" FT /translation="MWDPLLNEFPESVHGFRCMLAIKYLQSVEETYEPNTLGHDLIRDL FT ISVVRARDYVEATRRYNHFHARLEGSPKAELRQPIQQPCCCPHCPRHKQATIMDVQAHV FT PEAQNIQNVSKP" FT CDS 308..1084 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:Q17UU2" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q17UU2" FT /protein_id="CAK54962.1" FT /translation="MSKRPGDIIISTPASKVRRRLNFDSPYSSRAAVPIVQGTNKRRSW FT TYRPMYRKPRIYRMYRSPDVPRGCEGPCKVQSYEQRDDIKHTGIVRCVSDVTRGSGITH FT RVGKRFCVKSIYFLGKVWMDENIKKQNHTNQVMFFLVRDRRPYGNSPMDFGQVFNMFDN FT EPSTATVKNDLRDRFQVMRKFHATVIGGPSGMKEQALVKRFFRINSHVTYNHQEAAKYE FT NHTENALLLYMACTHASNPVYATMKIRIYFYDSISN" FT CDS complement(1081..1485) FT /gene="AC3" FT /product="AC3 protein" FT /db_xref="GOA:Q17UU1" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q17UU1" FT /protein_id="CAK54963.1" FT /translation="MDSRTGELITAPQAENGVFIWEINNPLYFKITEHSQRPFLMNNDI FT ISIQIRFNHNIRKALGIHKCFLNFRIWTTLQPQTGRFLRVFRYQVLKYLDSLGVISINN FT VIRAVDHVLYDVLENTINVTATHDIKYKFY" FT CDS complement(1226..1633) FT /gene="AC2" FT /product="AC2 protein" FT /db_xref="GOA:Q17UU0" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q17UU0" FT /protein_id="CAK54964.1" FT /translation="MQSSSPSTSHCSQVSIKVQHKIAKNKPIRRKRVDLDCGCSYYLHI FT NCNNHGFTHRGTHHCSSSREWRFYLGDKQSPLFQDNRTQPEAISNEQRHHFHSDKIQPQ FT HQEGIGDSQMFSQLPNLDDITASDWSFLKSI" FT CDS complement(1542..2615) FT /gene="AC1" FT /product="replication-associated protein" FT /db_xref="GOA:Q17UT9" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q17UT9" FT /protein_id="CAK54965.1" FT /translation="MPRLFKIYAKNYFLTYPNCSLSKEEALSQLKNLETPTNKKYIKVC FT RELHENGEPHLHVLIQFEGKYQCKNQRFFDLVSPNRSAHFHPNIQAAKSSTDVKTYVEK FT DGDFIDFGVFQIDSRSARGGQQSANDAYAEALNSGSKSEALNILKEKAPKDYILQFHNL FT SSNLDRIFSPPLEVYVSPFLSSSFNQVPDELDEWVAENVVSSAARPWRPISIVIEGDSR FT TGKTMWARSLGPHNYLCGHLDLSPKVYSNDVWYNVIDDVDPHYLKHFKEFMGAQRDWQS FT NTKYGKPIQIKGGIPTIFLCNPGPTSSYREYLDEEKNISLKNWALKNAIFVTLYEPLFA FT SINQGPTQDSQEQTNKA" FT CDS complement(2171..2464) FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="GOA:Q17UU4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q17UU4" FT /protein_id="CAK54966.1" FT /translation="MGNHISMCLSNSKANTNVRTNGSSTWYPQTGQHISIRTFRQLRAQ FT QMSRPTWRKTETSLILEFSKSIADQLEEVSNLPTTHMPRHSIQAVNPRPSIY" XX SQ Sequence 2781 BP; 758 A; 530 C; 612 G; 881 T; 0 other; accggatggc cgcgcctttt ctttttatgt ggtccccacg agggttccac agacgtcact 60 gtcaaccaat caaattgcat cctcaaacgt tagataagtg ttcatttgtc tttatatact 120 tggtccccaa gtagtctatc ttgcaatatg tgggatccac ttctaaatga atttcctgaa 180 tctgttcacg gatttcgttg tatgttagct attaaatatt tgcagtccgt tgaggaaact 240 tacgagccca atacattggg ccacgattta attagggatc ttatatctgt tgtaagggcc 300 cgtgactatg tcgaagcgac caggcgatat aatcatttcc acgcccgcct cgaaggttcg 360 ccgaaggctg aacttcgaca gcccatacag cagccgtgct gctgtcccca ttgtccaagg 420 cacaaacaag cgacgatcat ggacgtacag gcccatgtac cggaagccca gaatatacag 480 aatgtatcga agccctgatg ttcctcgtgg atgtgaaggc ccatgtaaag tccagtctta 540 tgagcaacgg gatgatatta agcatactgg tattgttcgt tgtgttagtg atgttactcg 600 tggatctgga attactcaca gagtgggtaa gaggttctgt gttaaatcga tatatttttt 660 aggtaaagtc tggatggatg aaaatatcaa gaagcagaat cacactaatc aggtcatgtt 720 cttcttggtt cgtgatagaa ggccctatgg aaacagccca atggattttg gacaggtttt 780 taatatgttc gataatgagc ccagtaccgc aactgtgaag aatgatttgc gggataggtt 840 tcaagtgatg aggaaatttc atgctacagt tattggtggg ccctctggaa tgaaggaaca 900 ggcattagtt aagagatttt ttagaattaa cagtcatgta acttataatc atcaggaggc 960 agccaagtat gagaaccata ctgaaaacgc cttgttattg tatatggcat gtacgcatgc 1020 ctctaatcca gtgtatgcaa ctatgaaaat acgcatctat ttctatgatt caatatcaaa 1080 ttaataaaat ttatatttta tatcatgagt tgctgttaca tttattgtgt tttcaagtac 1140 atcatacaat acatgatcaa ctgctctgat tacattgtta attgaaatta caccaagact 1200 atctaaatac ttaagaactt gatatctaaa tactcttaag aaacgaccag tctgaggctg 1260 taatgtcgtc caaattcgga agttgagaaa acatttgtga atccccaatg ccttcctgat 1320 gttgtggttg aatcttatct gaatggaaat gatgtcgttg ttcattagaa atggcctctg 1380 gctgtgttct gttatcttga aatagagggg attgtttatc tcccagataa aaacgccatt 1440 ctctgcttga ggagcagtga tgagttcccc tgtgcgtgaa tccatgattg ttgcagttga 1500 tgtggaggta gtatgagcag ccacagtcta ggtctacacg cttacgcctt attggtttgt 1560 tcttggctat cttgtgttgg accttgattg atacttgcga acagtggctc gtagagggtg 1620 acgaagattg cattcttgag agcccaattt ttcaaggata tgtttttttc ttcgtctaga 1680 tattccctat atgaggaggt aggtcctgga ttgcagagga agatagtggg aattccccct 1740 ttaatttgaa tgggcttccc gtactttgtg ttgctttgcc agtccctctg ggcccccatg 1800 aattccttga agtgctttaa ataatgcggg tctacgtcat caatgacgtt gtaccacaca 1860 tcattactgt acacctttgg gcttaggtct agatgtccac ataaataatt atgtgggcct 1920 agagacctgg cccacattgt tttgcctgtt ctgctatcac cctcaatgac aatacttatg 1980 ggtctccatg gccgcgcagc ggaagatacg acgttctcgg cgacccactc gtcaagttca 2040 tctggaactt gattaaaaga agaagaaaga aatggagaaa cataaacttc taaaggagga 2100 ctaaaaatcc tatctaaatt tgaacttaaa ttgtgaaatt gtaaaatata gtcctttggg 2160 gccttctctt ttaatatatt gagggcctcg gatttactgc ctgaattgag tgcctcggca 2220 tatgcgtcgt tggcagattg ctgacctcct ctagctgatc tgctatcgat ttggaaaact 2280 ccaaaatcaa tgaagtctcc gtctttctcc acgtaggtct tgacatctgt tgagctctta 2340 gctgcctgaa tgttcggatg gaaatgtgct gacctgtttg gggataccag gtcgaagaac 2400 cgttggttct tacattggta tttgccttcg aattggataa gcacatggag atgtggttcc 2460 ccattctcgt ggagttctct gcaaactttg atgtattttt tatttgttgg ggtttctagg 2520 ttttttaatt gggaaagtgc ttcctcttta gagagagaac aattgggata tgttaggaaa 2580 taatttttgg catatatttt aaataaacga ggcatgttga aatgaattgg tgtccctcaa 2640 agctctatgg caatcggtgt atcggtgtct tacttatacc tggacaccta atggctattt 2700 ggtaattttg taaaagtaca ttgcaattca aaattcaaaa ttcaaaaatc aaatcaataa 2760 agcggccatc cgtataatat t 2781 //