ID AM261836; SV 1; circular; genomic DNA; STD; VRL; 2750 BP. XX AC AM261836; XX DT 10-JAN-2009 (Rel. 98, Created) DT 10-JAN-2009 (Rel. 98, Last updated, Version 1) XX DE Ageratum enation virus complete genome, clone SonAL8(3) XX KW AC1 gene; AC4 protein; AC5 protein; AV2 gene; coat protein; KW complete genome; CP gene; pre-coat protein; REn gene; KW replication enhancer protein; replication-associated protein; KW transcription activator protein; TrAP gene. XX OS Ageratum enation virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2750 RA Tahir M.; RT ; RL Submitted (08-MAY-2006) to the INSDC. RL Tahir M., School of Biological Sciences, University of the Punjab, Lahore, RL Punjab, PAKISTAN. XX RN [2] RA Tahir M., Haider M.S., Briddon R.W.; RT "Diversity of begomovirus in the Punjab, Pakistan"; RL Unpublished. XX DR MD5; a23e8543e7d1122f15e63f9ff13ecb01. DR EuropePMC; PMC4353908; 25674770. XX FH Key Location/Qualifiers FH FT source 1..2750 FT /organism="Ageratum enation virus" FT /host="Sonchus oleraceus" FT /mol_type="genomic DNA" FT /country="Pakistan:Punjab, Lahore" FT /isolation_source="leaves" FT /clone="SonAL8(3)" FT /db_xref="taxon:188333" FT CDS 135..482 FT /gene="AV2" FT /product="pre-coat protein" FT /db_xref="GOA:B7ZDP7" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:B7ZDP7" FT /protein_id="CAK12829.1" FT /translation="MWDPLVNEFPETVHGFRCMLAVKYLQLVEKTYSPDTLGHDLIRDL FT ISVIRARNYVEATSRYNHFHARFEGTPTSQLRQPICEPCCCPHCPRHQSKSMGEQAHEQ FT KAQDVQDVQKS" FT CDS complement(286..603) FT /gene="AC5" FT /product="AC5 protein" FT /db_xref="InterPro:IPR013671" FT /db_xref="UniProtKB/TrEMBL:B7ZDP8" FT /protein_id="CAK12830.1" FT /translation="MSQPSSTRNITDTHNLTYMLNVMSRLKRLDLTWTFTSSRDIRTSV FT HPVHPGLSVHGPVRPCSCFGDADNGGSSTAHIWAVEVETSAYLRSGRGNDYICWSLRHN FT F" FT CDS 295..1065 FT /gene="CP" FT /product="coat protein" FT /function="encapsidation" FT /db_xref="GOA:B7ZDP9" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:B7ZDP9" FT /protein_id="CAK12831.1" FT /translation="MSKRPADIIISTPASKVRRRLNFDSPYVSRAAAPIVRVTKARAWA FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDIQHIGKVMCVSDVTRGTGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPRDFGEVFNMFDNEP FT STATVKNVHRDRYQVLRLWHATVTGGQYECKEQALVKKFVRVDNYVVYNQQEAGKYEDH FT SENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT CDS complement(1062..1466) FT /gene="REn" FT /product="replication enhancer protein" FT /function="up-regulation in viral DNA replication" FT /db_xref="GOA:B7ZDQ0" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:B7ZDQ0" FT /protein_id="CAK12832.1" FT /translation="MDSRTGELITAAQAENGVFIWEIQNPLYFKITDHQNRPFLMKEDI FT ITVQIQFNYNLRKALGIHKCFLVYRIWMTSQPQTGRFLRVFMTQVLKYLNNLGVISINN FT VIRSVDHVLWDVLEHIVYVEQSYSIKFNIY" FT CDS complement(1180..1611) FT /gene="TrAP" FT /product="transcription activator protein" FT /db_xref="GOA:B7ZDQ1" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:B7ZDQ1" FT /protein_id="CAK12833.1" FT /translation="MRSSSPSKAHSTQVPIKVQHRLAKKGTRRRRVDLPCGCSYFIAIA FT CHNHGFTHRGTHHCSSSREWRVYLGDSKSPVFQDNRSPEPAISHERGHHHRPNTVQLQP FT EESVGDTQVFSSLPNLDDFTASDWSFLKGLYDSSFKIFK" FT CDS complement(1514..2599) FT /gene="AC1" FT /product="replication-associated protein" FT /function="initiation of rolling circle" FT /db_xref="GOA:B7ZDQ2" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B7ZDQ2" FT /protein_id="CAK12834.1" FT /translation="MAAPNRFKINAKNYFLTYPKCSLTKEEALSQLLNLQTPTNKKYIK FT ICRELHEDGSPHLHVLIQFEGKYQCKNQRFFDLVSPNRSAHFHPNIQRAKSSTDVKSYI FT DKDGDTLEWGEFQVDGRSARGGQQTANDAAAEALNAGSKEAAMAIIREKLPEKFIFQYH FT NLNSNLDRIFTPPLEVYVSPFLSSSFDQVPEELEEWVSENVMVAAARPLRPQSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNNAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNNALRNWALKNAIFVTLEGPL FT YSGSNQSAAQASQEGDEASTC" FT CDS complement(2185..2442) FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:B7ZDQ3" FT /protein_id="CAK12835.1" FT /translation="MGALISMCSSSSKGNISARINDSSTWYPQTGQHISIRTFRELNPA FT PTSSPTSTRTETPSNGENSRSMGDLHEEVNRQLMMLLQKP" XX SQ Sequence 2750 BP; 746 A; 535 C; 617 G; 852 T; 0 other; accggatggc cgcgattttt ttaaagtggt cccccctgac aaagacatgt ccaccaatct 60 aaagcgtcgc tcaaagctta attgtttcgt ggtcccttat ttaaacttgc tcagcaagta 120 gtgcactccg cactatgtgg gatccattag ttaacgagtt tcccgaaacc gttcacggtt 180 ttaggtgtat gttagcagtt aaatatctgc agttagtaga gaagacttat tcgcctgata 240 cattagggca cgatttaatt agggatttaa tttcagttat tagggctaga aattatgtcg 300 aagcgaccag cagatataat catttccacg cccgcttcga aggtacgccg acgtctcaac 360 ttcgacagcc catatgtgag ccgtgctgct gcccccattg tccgcgtcac caaagcaaga 420 gcatgggcga acaggcccat gaacagaaag cccaggatgt acaggatgta cagaagtcct 480 gatgtcccta gaggatgtga aggtccatgt aaggtccagt cttttgagtc tagacatgac 540 attcagcata taggtaaggt tatgtgtgtc agtgatgtta cgcgtggaac tgggctgact 600 catcgagtgg gtaaaaggtt ttgtgttaaa tccgtttatg tcttgggtaa gatctggatg 660 gatgaaaata ttaagaccaa gaaccacact aatagtgtta tgtttttttt agttagggat 720 cgtaggcctg tggataaacc tcgagatttt ggtgaggttt ttaacatgtt tgataatgag 780 cccagtacgg ctactgtgaa gaatgttcat cgtgataggt atcaagtgct tcgtttatgg 840 catgcaactg ttacgggtgg acaatatgag tgtaaggaac aagctcttgt gaagaagttt 900 gttagggttg ataattatgt tgtgtataac cagcaagaag ctggcaagta tgaagatcat 960 tctgagaatg cgttaatgtt gtatatggca tgtacgcatg cctctaaccc agtgtatgct 1020 actttgaaga tacggatcta tttttatgat tccgtaacaa attaataaat attaaatttt 1080 attgaatatg attgttctac atatacaatg tgttctaata catcccataa aacatgatca 1140 actgatctga ttacattatt aatactgata actcctaaat tatttaaata ttttaaaact 1200 tgagtcataa agacccttaa gaaacgacca gtctgaggct gtgaagtcat ccagattcgg 1260 tagactagaa aacacttgtg tatccccaac gctttcctca ggttgtaatt gaactgtatt 1320 tggacggtga tgatgtcctc tttcatgaga aatggccggt tctggtgatc tgttatcttg 1380 aaatacaggg gattttgaat ctcccagata aacacgccat tctctgcttg agctgcagtg 1440 atgagttccc ctgtgcgtga atccatggtt gtggcaggct attgctatga agtatgaaca 1500 cccacaaggg agatcaacac gtcgacgcct cgtccccttc ttggctagcc tgtgctgcac 1560 tttgattgga acctgagtag agtgggcctt cgagggtgac gaagatcgca ttctttaaag 1620 cccaatttct gagagcatta ttcttctctt catccaagaa ctctttataa cttgaattag 1680 gtcctggatt gcagaggaag atagtgggaa ttccgccttt aatttgaact ggctttccgt 1740 atttggtatt tgattgccag tccctttggg cccccatgaa ctctttaaag tgctttaggt 1800 agtggggatc tacgtcatca atgacgttat accacgcatt attgctgtaa actttggggc 1860 ttagatctaa atgaccgcat aggtaattat gaggccctaa tgacctagcc cacatcgttt 1920 tacccgtacg actgtctccc tcaattacta tactttgagg cctcagaggc cgcgcagcgg 1980 caaccatgac attttctgag acccattctt caagttcttc aggaacttga tcaaaagaag 2040 aagataaaaa aggcgaaaca taaacctcca acggaggagt aaaaatccta tctaaattag 2100 aatttaaatt atgatattga aaaataaatt tttctgggag tttctccctt attatagcca 2160 ttgcagcttc tttagagcct gcatttaggg cttctgcagc agcatcatta gctgtctgtt 2220 gacctcctcg tgcagatctc ccatcgacct ggaattctcc ccattcgagg gtgtctccgt 2280 ccttgtcgat gtaggacttg acgtcggtgc tggatttagc tctctgaatg ttcggatgga 2340 aatgtgctga cctgtttggg gataccaggt cgaagaatcg ttgattcttg cactgatatt 2400 tcccttcgaa ctggatgagc acatggagat gagggctccc atcttcgtgt agttctctgc 2460 agatcttgat gtattttttg tttgttgggg tttggagatt taataattgg gaaagtgcct 2520 cttctttagt aagggagcac ttgggataag tgagaaaata atttttggca tttattttaa 2580 accgattcgg ggctgccatg ttgacttagt caatcggtgt ctctcaacct tctctatgta 2640 tcggtgtact ggagtcctat atatatggag actccaatgg cataattgta ataacaaaac 2700 tttaatttga aatttaaaaa aaaggctaaa gcggccatcc gtataatatt 2750 //