ID   AM114273; SV 1; linear; genomic RNA; STD; VRL; 2216 BP.
XX
AC   AM114273;
XX
DT   18-OCT-2005 (Rel. 85, Created)
DT   18-OCT-2005 (Rel. 85, Last updated, Version 1)
XX
DE   Cucumber mosaic virus partial 3a gene and partial cp gene for coat protein,
DE   genomic RNA, strain Le02 RNA3
XX
KW   3a gene; 3a protein; coat protein; cp gene.
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RP   1-2216
RA   Salanki K.;
RT   ;
RL   Submitted (18-OCT-2005) to the INSDC.
RL   Salanki K., Virology, Agricultural Biotechnology Center, Godollo,
RL   Szent-Gyorgyi A. str. 4., H-2100, HUNGARY.
XX
RN   [2]
RA   Salamon P., Kiss L., Salanki K.;
RT   "Isolation of a highly virulent strain of CMV from tomato affected by fruit
RT   necrosis in Hungary";
RL   Unpublished.
XX
DR   MD5; 2aa1c97b4833e69eb059e199e9273410.
DR   EuropePMC; PMC3550809; 23730005.
DR   RFAM; RF01084; TLS-PK3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2216
FT                   /organism="Cucumber mosaic virus"
FT                   /lab_host="Nicotiana tabacum cv. xanthi"
FT                   /strain="Le02 RNA3"
FT                   /isolate="CMV-Le02"
FT                   /mol_type="genomic RNA"
FT                   /country="Hungary:Nyirlugos"
FT                   /isolation_source="Lycopersicon esculentum"
FT                   /db_xref="taxon:12305"
FT   CDS             121..960
FT                   /codon_start=1
FT                   /gene="3a"
FT                   /product="3a protein"
FT                   /function="movement protein"
FT                   /db_xref="InterPro:IPR000603"
FT                   /db_xref="UniProtKB/TrEMBL:Q3BJZ0"
FT                   /protein_id="CAJ38269.1"
FT                   /translation="MAFQGTSRTLTQQSSAATSDDLQKILFSPEAIKKMATECDLGRHH
FT                   WMRADNAISVRPLVPEVTHGRIASFFKSGYDVGELCSKGYMSVPQVLCAVTRTVSTDAE
FT                   GSLRIYLADLGDKELSPIDGQCVSLHNHDLPALVSFQPTYDCPMETVGHRKRCFAVVIE
FT                   RHGYIGYTGTTASVCSNWQARFSSKNNNYTHIAAGKTLVLPFNRLAEQTKPSAVARLLK
FT                   SQLNNIESSQYLLTNAKTNQNARSESEDLNVESPPAAIGSSSASRSEAFRPQVVNGL"
FT   mat_peptide     121..960
FT                   /gene="3a"
FT                   /product="3a protein"
FT   CDS             1258..1914
FT                   /codon_start=1
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q76U37"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="InterPro:IPR023800"
FT                   /db_xref="InterPro:IPR037137"
FT                   /db_xref="UniProtKB/TrEMBL:Q76U37"
FT                   /protein_id="CAJ38270.1"
FT                   /translation="MDKSESTSAGRNRRRRPRRGSRSAPSSADANFRVLSQQLSRLNKT
FT                   LAAGRPTINHPTFVGSERCRPGYTFTSITLKPPKIDRGSYYGKRLLLPDSVTEYDKKLV
FT                   SRIQIRVNPLPKFDSTVWVTVRKVPASSDLSVAAISAMFADGASPVLVYQYAASGVQAN
FT                   NKLLYDLSAMRADIGDMRKYAVLVYSKDDALETDELVLHVDIEHQRIPTSGVLPV"
FT   mat_peptide     1258..1914
FT                   /gene="cp"
FT                   /product="coat protein"
XX
SQ   Sequence 2216 BP; 518 A; 528 C; 527 G; 643 T; 0 other;
     gtaatcttac cactgtgtgt gtgcgtgtgt gtgtgtcgag tcgtgttgtc cgcacatttg        60
     agtcgtgctg tccgcacata ttttatcttt ctgtatacag tgtgttagat ttcccgaggc       120
     atggctttcc aaggtaccag taggacttta actcaacagt cctcagcggc tacgtctgac       180
     gatcttcaaa agatattatt tagccctgaa gccattaaga aaatggctac tgagtgtgac       240
     ctaggccggc atcattggat gcgcgctgat aatgctattt cagtccggcc cctcgttccc       300
     gaagtaaccc acggtcgtat tgcttccttc tttaagtctg gatatgatgt tggtgaatta       360
     tgctcaaaag gatacatgag tgtccctcaa gtgttatgtg ctgttactcg aacagtttcc       420
     actgatgctg aagggtcttt gagaatttac ttagctgatc taggcgacaa ggagttatct       480
     cccatagatg ggcaatgcgt ttcgttacat aaccatgatc ttcccgcttt ggtgtctttc       540
     cagccgacgt atgattgtcc tatggaaaca gttgggcatc gtaagcggtg ttttgctgtc       600
     gttatcgaaa gacatggtta cattgggtat accggtacca cagctagcgt gtgtagtaat       660
     tggcaagcaa ggttttcatc taagaataac aactacactc atatcgcagc tgggaagact       720
     ctagtactgc ctttcaacag actagctgag caaacaaaac cgtcagctgt tgctcgcctg       780
     ttgaagtcgc aattgaacaa cattgaatct tcgcaatatt tgttaacgaa tgcgaagact       840
     aatcaaaatg cgcgcagtga gtccgaggat ttaaatgttg agagccctcc cgccgcaatc       900
     gggagttctt ccgcgtcccg ctccgaagcc ttcagaccgc aggtggttaa cggtctttag       960
     cactttggtg cgtattagta tataagtatt tgtgagtctg tacataatac tatatctata      1020
     gtgtcctgtg tgagttgata cagtagacat ctgtgacgcg atgccgtgtt gagaagggaa      1080
     cacatctggt tttagtaagc ctacatcata gttttgaggt tcaattcctc ttactccctg      1140
     ttgagcccct tactttctca tggatgcttc tccgcgagat tgcgttattg tctactgact      1200
     atatagagag tgtgtgtgct gtgttttctc ttttgtgtcg tagaattgag tcgagtcatg      1260
     gacaaatctg aatcaaccag tgctggtcgt aaccgtcgac gtcgtccgcg tcgtggttcc      1320
     cgctccgccc cctcctccgc ggatgctaac tttagagtct tgtcgcagca gctttcgcga      1380
     cttaataaga cgttagcagc tggtcgtcca actattaacc acccaacctt tgtagggagt      1440
     gaacgctgta gacctgggta cacgttcaca tctattaccc taaagccacc aaaaatagac      1500
     cgtgggtctt attacggtaa aaggttgtta ctacctgatt cagtcacgga atatgataag      1560
     aagcttgttt cgcgcataca aattcgagtt aatcctttgc cgaaatttga ttctaccgtg      1620
     tgggtgacag tccgtaaagt tcctgcctcc tcggacttat ccgttgccgc catctctgct      1680
     atgttcgcgg acggagcctc accggtactg gtttatcagt atgccgcatc tggagtccaa      1740
     gccaacaaca aactgttgta tgatctttcg gcgatgcgcg ctgatatagg tgacatgaga      1800
     aagtacgccg tcctcgtgta ttcaaaagac gatgcgctcg agacggacga gctagtactt      1860
     catgttgaca tcgagcacca acgcattccc acatctggag tgctcccagt ctgattccgt      1920
     gttcccagaa tcctccctcc gatctctgtg gcgggagctg agttggcagt tctgctataa      1980
     actgtctgaa gtcactaaac gttttcacgg tgaacgggtt gtccatccag cttacggcta      2040
     aaatggtcag tcgtggagaa atccacgcca gcagatttac aaatctctga ggcgcctttg      2100
     aaaccatctc ctaggtttct tcggaaggac ttcggtccgt gtacctctag cacaacgtgc      2160
     tagtttcagg gtacgggtgc ccccccactt tcgtgggggc ctccaaaagg agacca          2216
//