ID AM087549; SV 1; linear; genomic RNA; STD; VRL; 2572 BP. XX AC AM087549; XX DT 29-JUN-2006 (Rel. 88, Created) DT 29-JUN-2006 (Rel. 88, Last updated, Version 1) XX DE Ophiostoma mitovirus 1b RdRp gene for RNA-dependent RNA polymerase, genomic DE RNA XX KW RdRp gene; RNA-dependent RNA polymerase. XX OS Ophiostoma mitovirus 1b OC Viruses; Riboviria; Narnaviridae; Mitovirus; unclassified Mitovirus. XX RN [1] RP 1-2572 RA Buck K.W.; RT ; RL Submitted (25-SEP-2005) to the INSDC. RL Buck K.W., Biology, Imperial College London, Sir Alexander Fleming RL Building, London, SW7 2AZ, UNITED KINGDOM. XX RN [2] RX DOI; 10.1007/s11262-005-0029-5. RX PUBMED; 16791417. RA Doherty M., Coutts R.H.A., Brasier C.M., Buck K.W.; RT "Sequence of RNA-dependent RNA polymerase genes provides evidence for three RT more distinct mitoviruses in Ophiostoma novo-ulmi isolate Ld"; RL Virus Genes 33(1):41-44(2006). XX DR MD5; 38befbabf8d8684abf9bc7f5a1411048. XX FH Key Location/Qualifiers FH FT source 1..2572 FT /organism="Ophiostoma mitovirus 1b" FT /host="Ophiostoma novo-ulmi" FT /isolate="Ld" FT /mol_type="genomic RNA" FT /country="United Kingdom" FT /db_xref="taxon:348095" FT CDS 73..2403 FT /transl_table=4 FT /gene="RdRp" FT /product="RNA-dependent RNA polymerase" FT /db_xref="GOA:Q18L79" FT /db_xref="InterPro:IPR008686" FT /db_xref="UniProtKB/TrEMBL:Q18L79" FT /protein_id="CAJ32467.1" FT /translation="MKNLYSWQRGSKDLFHVNKGLFLVLKLVWGGTTISKLKSFYVLLV FT HLKTLQEKSGLAYTCQYMKACAIYVMKYVAKDPNKLAINSFSILVSLTDSGIPRIIPSY FT IRYQLRRGNKNSIKALLTVFNLYRVLEYPGVLKLSTITDSSSFTLPSDFSGWLAEFMRS FT QSMTVPFKISDLLNPFLIYSSGPCSPKGMNNTAGWILAFRRLKALFLDKEFFLTLLDPY FT KERRQWWESSPFIKYFNAILPDFDDNVSLGKLAFKEEPGKVRVFAMADCITQWVLHPLH FT QYLFSILKQISIVDATFDQEEGVKTLSAKIKAGKRVVFSLDLSAATDRLPLTIQAQILN FT HIVPKLGDHWANLLVNRDYSVPNHTTLPVNPGTVRYGAGQPMGAYSSWAMLALTHHFIV FT QYCAFKVYHTNSFFKDYLILGDDLLLLDAKVAKQYLQVMNQLDVGVNLAKSLISVRGYG FT EFAKQFLSPDGPLQGVSLREFSSLKDGMSNILSLSTKMNLKPALLLRLFGFGSKSIGHS FT TLPFTRYSLRSSLDHLFISPLANSSNKWLDYFSCIRHLKSLTLNNSLLRYFLWGFEFLK FT YKWVYMKVRENEQLMLKHGTHHYHQIVSETLLNYWCPSPTDEVLKSPNIADLSAGFFFS FT TPPIDKASFKVLMINHINILFSCGSLFTELMNGGAMDLVPKFLTFELSFEEGYSDFENV FT DNDHLWSVITRDPKSWVKPNNFGGNNFDIVEFMSQQPSVEYHQPRTLKEISLALQLKKD FT LFDSGLVSGSQTILDVPLFNKKG" XX SQ Sequence 2572 BP; 783 A; 461 C; 476 G; 851 T; 1 other; taaagccttt aatactaaag aaaagtcaca tacaataatt tgataaaatt actgcaagca 60 acactcttta gaatgaagaa tttatattct tggcaaagag gttcgaaaga cctcttccat 120 gttaataaag gactattttt agttcttaaa ttagtctggg gtggaacaac tatatccaaa 180 ttaaagtcgt tttatgtgtt actagttcac cttaaaacat tacaagaaaa atcaggtctt 240 gcatatactt gtcagtatat gaaggcttgt gccatctatg taatgaaata cgtggctaag 300 gatcccaata agttagcaat taatagtttt tctattttag tatccttaac tgattcgggt 360 atacctagaa ttattcctag ttatatcagg taccaattaa gaagaggaaa taagaattct 420 attaaagctc tattgacagt cttcaatctg tatagggttc tggaataccc gggagtatta 480 aaactctcga ctattacaga ttctagtagt tttactctac cttcggattt ttcaggttga 540 ttggcagaat ttatgagatc acagtctatg actgtacctt ttaaaatttc tgatcttctt 600 aatcctttct tgatttattc aagtggaccc tgttcaccca aaggtatgaa taacactgca 660 ggttggattc tagcctttag aagattgaaa gccttgtttc ttgacaagga attctttctt 720 actttgctag atccctataa agagagaaga caatggtgag aatcttctcc ttttattaag 780 tactttaatg cgatcctccc tgactttgac gacaatgttt ccttagggaa actagctttt 840 aaggaggaac cgggaaaggt aagagtgttt gctatggcag actgtataac tcaatgagtg 900 ttacatcctc ttcatcagta cttattttct atcttgaaac aaattagcat cgttgatgct 960 acctttgatc aagaagaagg ggttaaaacc ctttctgcga aaataaaagc tggaaagaga 1020 gtagtattct ctcttgattt atcagcagcc acagacagay tacctctaac tattcaagct 1080 cagattctga accatatagt tcccaaatta ggtgaccatt gagctaatct tctggtgaac 1140 agagattact cagtgccgaa ccatactact ctaccagtta atcctggtac tgttaggtat 1200 ggagcggggc aacctatggg ggcttatagt tcatgagcta tgcttgccct aacacatcac 1260 ttcattgttc agtattgcgc tttcaaagtc taccacacta actcattctt caaagattat 1320 ttaatcttgg gagatgactt attgttgtta gatgcgaaag tcgcaaaaca gtacttgcaa 1380 gtgatgaacc aactggatgt cggagttaat ctagcaaaat ccctaatctc agttagaggt 1440 tatggtgaat ttgctaaaca attcttatct ccagatggtc ctcttcaagg agttagttta 1500 agagaattct cgtcgttaaa agatggaatg tctaacattc tatccttatc gacaaagatg 1560 aatcttaaac ccgctctctt gttgagattg tttgggttcg gttctaaatc aattggtcat 1620 tctactttac ctttcacaag gtattcactg agatcttctc ttgatcactt gttcatcagt 1680 ccgcttgcga actcttcgaa taagtgatta gattatttct catgtataag acatttaaaa 1740 tctctcactc taaataactc attattgaga tatttcttgt ggggatttga atttctaaaa 1800 tacaagtgag tctatatgaa agtgagggag aatgaacaac ttatgttgaa acatggaacg 1860 catcactacc atcagattgt aagtgaaacc ttactgaatt actgatgtcc ttctcctacg 1920 gatgaggtgt tgaaatcacc gaatattgct gatttgtcag caggattctt cttttcaact 1980 cctcccatag ataaggcatc ttttaaggtg ttgatgatta atcacatcaa catcttgttt 2040 tcatgtgggt ctctctttac agagctgatg aatggtggtg caatggatct agtccctaaa 2100 ttcttaacat ttgagttgtc ctttgaagag ggctactcag attttgagaa tgttgataac 2160 gatcatctat gatccgttat cacaagggat ccgaaatctt gggttaaacc caataatttt 2220 ggaggaaaca attttgatat tgttgaattt atgagccagc aaccatcggt agagtaccac 2280 caacctagaa ctcttaaaga gatttcttta gctttacaac tgaagaaaga tctctttgat 2340 agtggtttgg ttagtggatc tcaaactata ctcgatgtac ctctcttcaa taagaaaggg 2400 tagactggac tctgacaaga ggtcttgtct ctggttgaga atatacagtt ggaggtgacc 2460 attataatta cttcgtaatt ataataggaa gacactcccg agttatattt ataaccagta 2520 gactagagat gagacacctt cgtcattgaa cattttcagt cctcataaag ga 2572 //