ID   AJ889242; SV 1; linear; genomic RNA; STD; VRL; 1778 BP.
XX
AC   AJ889242;
XX
DT   21-MAR-2007 (Rel. 91, Created)
DT   21-MAR-2007 (Rel. 91, Last updated, Version 1)
XX
DE   Wheat streak mosaic virus partial gene for polyprotein, genomic RNA,
DE   isolate Ger
XX
KW   polyprotein.
XX
OS   Wheat streak mosaic virus
OC   Viruses; Riboviria; Potyviridae; Tritimovirus.
XX
RN   [1]
RP   1-1778
RA   Adams M.J.;
RT   ;
RL   Submitted (08-MAR-2005) to the INSDC.
RL   Adams M.J., Plant Pathogen Interactions Division, Rothamsted Research,
RL   Harpenden, Herts AL5 2JQ, UNITED KINGDOM.
XX
RN   [2]
RA   Shi Y.H., Hong X.Y., Chen J., Adams M.J., Zheng H.Y., Lin L., Qing B.X.,
RA   Chen J.;
RT   "Detection and classification of potyviruses from China and elsewhere";
RL   Unpublished.
XX
DR   MD5; c209c2ce006c35f2885bea5f3b5e21b7.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1778
FT                   /organism="Wheat streak mosaic virus"
FT                   /isolate="Ger"
FT                   /mol_type="genomic RNA"
FT                   /country="Germany"
FT                   /db_xref="taxon:31741"
FT   CDS             <1..1632
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:A4F350"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:A4F350"
FT                   /protein_id="CAI65410.1"
FT                   /translation="GNNSGQPSTVVDNTMCLIIAMEYCRMRVEKDHGHRMRILYVCNGD
FT                   DLLINADTKDRDFIQQYFADYMRELELNYSFDEAYRSIEEVEYMSHTFMKRSSMYIPKL
FT                   KRERIVAILEWQRSKEPKAIQSAIIAAYVEAFGYDEFTEMIEELAQEVSAVWPDFKLPS
FT                   RQEVEDLYLTGTRTDLGEEIKECGEQYCVYESSEAATDAVLAAANAGTGSEPSSGSTQS
FT                   SLSASTASGSGSSPSGSGSGAVGESGSGSAQTQSNNVSVMAGLDTGGTKTGQGSGSKGT
FT                   SGSFVSNPVRTGGRATDVQDQTPGLVFPAPKITTKAIYMPKTVRDKIKPEMINNMIKYQ
FT                   PRAELIDNRYATTEQLNTWIEEASEGLDVTEEVFINTLLPGWVYHCIINTTSPENRALG
FT                   TWRVVNNAGKDNEQQLEFKIEPMYKAAKPSLRAIMRHFGEGARVMIEESVRIGKPIIPR
FT                   GFDKAGVLSINNIVAACDFIMRGADDTPNFVQVQNSVAVNRLRGIQNKLFSQSRLSAGT
FT                   NEDNSRHDADDVRENTHSFNGVNALA"
FT   mat_peptide     <1..582
FT                   /product="NIb polymerase"
FT   mat_peptide     583..1629
FT                   /product="coat protein"
XX
SQ   Sequence 1778 BP; 539 A; 363 C; 489 G; 387 T; 0 other;
     gggaataata gcgggcaacc aagcacagtt gtcgacaaca cgatgtgttt aatcatagct        60
     atggagtatt gcagaatgcg tgtagaaaag gatcatggac atagaatgag gatactgtac       120
     gtgtgcaacg gggatgattt gcttatcaat gccgacacaa aggacagaga cttcatacag       180
     cagtattttg ccgattacat gcgcgaactg gagctgaatt actcatttga cgaggcttac       240
     cgtagtatcg aggaggtgga atacatgtca cacacattca tgaagcggag ttcgatgtac       300
     attccaaagt tgaagcgcga acgaattgtg gcaatcctgg agtggcagag gagcaaggaa       360
     ccgaaggcta ttcagagcgc tattattgca gcatacgtgg aagctttcgg ttatgatgaa       420
     ttcacggaga tgattgaaga acttgcgcag gaggtttcag cggtgtggcc agatttcaag       480
     ttgccctcac gacaagaggt tgaggatttg tacttgactg ggactcgaac ggatttagga       540
     gaagagatta aggaatgtgg agagcaatac tgcgtgtacg aatcgagtga ggccgcaacc       600
     gacgctgtct tggcggcagc aaatgcagga actggtagtg aaccgagcag tggaagtact       660
     caatcaagtc tgagcgcaag tactgctagc ggatcaggga gctcaccatc aggatcaggt       720
     tctggagcag tgggtgaatc aggttctgga tcagcacaaa cacaatctaa taacgtatct       780
     gtcatggctg gcctcgacac gggaggaact aagacaggtc aaggatcagg atcaaaaggg       840
     acgagtggtt cattcgtatc gaatcccgtg cgaactggag gccgagcaac ggatgtgcaa       900
     gatcagacac cagggttagt gtttccagca ccaaagatca caacaaaggc catatacatg       960
     ccaaaaactg tacgcgacaa gataaagcct gaaatgataa ataacatgat caaataccaa      1020
     ccgcgtgcgg aacttatcga caacagatat gcaacaactg aacagctcaa cacctggata      1080
     gaagaggcat ctgaagggct tgacgtgaca gaggaagttt tcataaacac cttacttcca      1140
     ggatgggtct accactgcat aatcaacaca acgagcccag agaacagagc actaggaact      1200
     tggcgtgttg tgaataatgc aggcaaggac aatgagcagc aactcgaatt taaaattgaa      1260
     ccgatgtaca aagccgcgaa gccatcactt cgagccatta tgcgtcactt tggcgaggga      1320
     gctcgagtga tgatcgagga gagtgttcgg attggaaaac ctatcatacc aaggggcttc      1380
     gacaaggccg gtgtgctaag catcaacaat attgtggcag cgtgtgattt cattatgcgc      1440
     ggtgcagatg acacaccaaa ttttgtgcaa gtgcagaaca gcgttgcagt gaacaggcta      1500
     cgcggaatac agaacaagct gttttcccag tcacgactga gtgcgggtac taatgaggac      1560
     aactcacgtc atgatgcaga tgatgtgagg gagaacacgc acagtttcaa tggtgtaaac      1620
     gctcttgcgt gagcacagta gaaaccacaa atccacgagt accaggattt gagcggaata      1680
     acgctgcgtt tcgttaaccc ttcgttgtta ctaggtgtgt acttctccac gagaggtgtg      1740
     cattcttggt agctatgtgt gggttagggc gacgctac                              1778
//