ID AJ865337; SV 2; linear; genomic DNA; STD; VRL; 2791 BP. XX AC AJ865337; XX DT 01-MAR-2005 (Rel. 83, Created) DT 20-AUG-2007 (Rel. 92, Last updated, Version 4) XX DE Tomato yellow leaf curl virus-Mild complete genome, isolate Reunion XX KW AC1 gene; AC2 gene; AC3 gene; AC4 gene; AC4 protein; AV1 gene; AV2 gene; KW AV2 product; coat protein; complete genome; replication enhancer protein; KW Replication-associated protein; transcriptional transactivator protein. XX OS Tomato yellow leaf curl virus - Mild OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RC revised by [3] RA Delatte H.; RT ; RL Submitted (23-NOV-2004) to the INSDC. RL Delatte H., Virology, CIRAD-3P, 7, chemin de l'IRAT / Ligne Paradis, 97410 RL Saint Pierre, REUNION. XX RN [2] RX DOI; 10.1099/vir.0.80805-0. RX PUBMED; 15831967. RA Delatte H., Martin D.P., Naze F., Goldbach R., Reynaud B., Peterschmitt M., RA Lett J.M.; RT "South West Indian Ocean islands tomato begomovirus populations represent a RT new major monopartite begomovirus group"; RL J. Gen. Virol. 86(Pt 5):1533-1542(2005). XX RN [3] RP 1-2791 RA Delatte H.; RT ; RL Submitted (20-AUG-2007) to the INSDC. RL Delatte H., Virology, CIRAD-3P, 7, chemin de l'IRAT / Ligne Paradis, 97410 RL Saint Pierre, REUNION. XX DR MD5; 106816219c50642c3b9a442db656a9d9. DR EuropePMC; PMC2224568; 17977971. DR EuropePMC; PMC2585570; 18976479. DR EuropePMC; PMC3088723; 21573141. DR EuropePMC; PMC3589402; 23472190. DR EuropePMC; PMC3953851; 24598426. DR EuropePMC; PMC5014472; 27774276. XX FH Key Location/Qualifiers FH FT source 1..2791 FT /organism="Tomato yellow leaf curl virus - Mild" FT /host="Lycopersicon esculentum (tomato)" FT /isolate="Reunion" FT /mol_type="genomic DNA" FT /country="Reunion" FT /db_xref="taxon:220944" FT CDS 148..498 FT /gene="AV2" FT /product="putative AV2 product" FT /db_xref="GOA:Q5DVD2" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q5DVD2" FT /protein_id="CAI26257.1" FT /translation="MWDPLLNEFPESVHGFRCMLAIKYLQSVEETYEPNTLGHDLIRDL FT ISVVRARDYVEATRRYNHFHARLEGSPKAELRQPIQQPCCCPHCPRHKQATIMDVQAHV FT PEAQNIQNVSKP" FT CDS 308..1084 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:Q5DVD1" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q5DVD1" FT /protein_id="CAI26258.2" FT /translation="MSKRPGDIIISTPASKVRRRLNFDSPYSSRAAVPIVQGINKRRSW FT TYRPMYRKPRIYRMYRSPDVPRGCEGPCKVQSYEQRDDIKHTGIVRCVSDVTRGSGITH FT RVGKRFCVKSIYFLGKVWMDENIKKQNHTNQVMFFLVRDRRPYGNSPMDFGQVFNMFDN FT EPSTATVKNDLRDRFQVMRKFHATVIGGPSGMKEQALVKRFFRINSHVTYNHQEAAKYE FT NHTENALLLYMACTHASNPVYATMKIRIYFYDSISN" FT CDS complement(1081..1485) FT /gene="AC3" FT /product="replication enhancer protein" FT /db_xref="GOA:Q5DVD3" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q5DVD3" FT /protein_id="CAI26259.2" FT /translation="MDSRTGELITAPQAENGVFIWEINNPLYFKIKEHSQRPFLMNHDI FT IFIQIRFNHNIRKVLGIHKCFLNFRIWTTLQTQTGHFLRVFRHQVLKYLDRIGVISINN FT VIRAVDHVLYDVLENTINVTETHDIKYKFH" FT CDS complement(1226..1633) FT /gene="AC2" FT /product="transcriptional transactivator protein" FT /db_xref="GOA:Q5DVD6" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q5DVD6" FT /protein_id="CAI26260.2" FT /translation="MQPSSPSTSHCSQVSIKVQHKIAKKKPIRRKRVDLDCGCSYYLHL FT NCNNHGFTHRGTHHCSSGREWRFYLGDKQSPLFQDKRTQPEAISNEPRHHFHSDKIQPQ FT HQEGIGDSQMFSQLPNLDDITDSDWSFLKSI" FT CDS complement(1542..2621) FT /gene="AC1" FT /product="replication-associated protein" FT /db_xref="GOA:Q5DVD5" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q5DVD5" FT /protein_id="CAI26261.2" FT /translation="MAPPKRFQINCKNYFLTYPKCSLTKEEALSQLKNLETPTNKKYIK FT VCRELHENGEPHLHVLIQFEGKFKCQNQRFFDLVSPSRAAHFHPNIQGAKSSSDVKSYV FT DKDGNTVDWGEFQIDGRSARGGQQSANDAYAAALNSGSKSEALRIIKELIPKDYILQFH FT NLNSNLDRIFQEPPAPYISPFLSSSFNQVPDELEVWVSENVVSSAARPWRPNSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPNSSYREYLDEEKNISLKNWALKNATFVTLYEPL FT FASINQGPTQDSQEETNKA" FT CDS complement(2162..2464) FT /gene="AC4" FT /product="putative AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q5DVD4" FT /protein_id="CAI26262.1" FT /translation="MGNHISMCLSNLKGNSSAKISDSSTWYPQAGQHISIQTFRELNPV FT QTSSLMSIRTETPSTGVSFRSTDDLHVGVSSQPMTLTPQLLTQAVSQRLLESLKN" XX SQ Sequence 2791 BP; 761 A; 539 C; 610 G; 881 T; 0 other; accggatggc cgcgcctttt ccttttatat ggtccccacg agggttccac agacgtcact 60 gtcaaccaat caaattgcat ccttaaacgt tagataagtg ttcatttgtc tttatatact 120 tggtccccaa gtagtttgtc ttgcaatatg tgggatccac ttctaaatga atttcctgaa 180 tctgttcacg gatttcgttg tatgttagct attaaatatt tgcagtccgt tgaggaaact 240 tacgagccca atacattggg ccacgattta attagggatc ttatatctgt tgtaagggcc 300 cgtgactatg tcgaagcgac caggcgatat aatcatttcc acgcccgcct cgaaggttcg 360 ccgaaggctg aacttcgaca gcccatacag cagccgtgct gctgtcccca ttgtccaagg 420 cataaacaag cgacgatcat ggacgtacag gcccatgtac cggaagccca gaatatacag 480 aatgtatcga agccctgatg ttccccgtgg atgtgaaggc ccatgtaaag ttcagtctta 540 tgagcaacgg gatgatatta agcatactgg tattgttcgt tgtgttagtg atgttactcg 600 tggatctgga attactcaca gagtgggtaa gaggttctgt gttaaatcga tatatttttt 660 aggtaaagtc tggatggatg aaaatatcaa gaagcagaac cacactaatc aggtcatgtt 720 cttcttggtc cgtgatagaa ggccctatgg aaacagccca atggattttg gacaggtgtt 780 taatatgttc gataatgagc ccagtaccgc aacagtgaag aatgatttgc gggataggtt 840 tcaagtgatg aggaaatttc atgctacggt tattggtggt ccctctggaa tgaaggaaca 900 ggcattagtt aagagatttt ttagaattaa cagtcatgta acttataatc atcaggaggc 960 agccaagtac gagaaccata ctgaaaacgc cttgttattg tatatggcat gtacgcatgc 1020 ctctaatcca gtgtatgcaa ctatgaaaat acgcatctat ttctatgatt caatatcaaa 1080 ttaatgaaat ttatatttta tatcatgagt ttctgttaca tttattgtgt tttcaagtac 1140 atcatacaat acatgatcaa ctgctctgat tacattgtta attgaaatta caccaatcct 1200 atctaaatac ttaagaactt gatgtctaaa tactcttaag aaatgaccag tctgagtctg 1260 taatgtcgtc caaattcgga agttgagaaa acatttgtga atccccaata ccttcctgat 1320 gttgtggttg aatcttatct gaatgaaaat gatgtcgtgg ttcattagaa atggcctctg 1380 gctgtgttct tttatcttga aatagagggg attgtttatc tcccagataa aaacgccatt 1440 ctctgcctga ggagcagtga tgagttcccc tgtgcgtgaa tccatgattg ttgcagttga 1500 ggtggaggta gtatgagcag ccacagtcta ggtctacacg cttacgcctt attggtttct 1560 tcttggctat cttgtgttgg accttgattg atacttgcga acagtggctc gtagagggtg 1620 acgaaggttg cattcttgag agcccaattt ttcaaggata tgtttttttc ttcgtctaga 1680 tattccctat atgaggagtt aggtcctgga ttgcagagga agatagtggg aattccccct 1740 ttaatttgaa tgggcttccc gtactttgtg ttgctttgcc agtccctctg ggcccccatg 1800 aattccttga agtgctttaa ataatgcggg tctacgtcat caatgacgtt gtaccatgca 1860 tcattactgt acacctttgg gcttaggtct agatgtccac ataaataatt atgtgggcct 1920 agagacctgg cccacattgt tttgcctgtt ctgctatcac cctcaatgac aatactatta 1980 ggtctccatg gccgcgcagc ggaagacacg acgttctcgg acacccatac ttcaagttca 2040 tctggaactt gattaaaaga tgaagataaa aagggagaaa tataaggagc cggaggctcc 2100 tgaaaaatcc tatctaaatt actatttaaa ttatgaaatt gtaaaatata atctttcggt 2160 attaattctt taatgattct aagagcctct gacttactgc ctgagttaag agctgcggcg 2220 taagcgtcat tggctgactg ctgaccccca cgtgcagatc gtccgtcgat ctgaaactca 2280 ccccagtcga cggtgtttcc gtccttatcg acataagact tgacgtctga actggattta 2340 gctccctgaa tgtttggatg gaaatgtgct gccctgcttg gggataccag gtcgaagaat 2400 cgctgatttt ggcacttgaa tttcccttca aattggataa gcacatggag atgtggttcc 2460 ccattctcgt ggagttctct gcaaactttg atgtattttt tatttgttgg ggtttctagg 2520 ttttttaatt gggaaagtgc ttcttctttc gttaaggagc acttaggata tgtgaggaaa 2580 taatttttgc aatttatttg gaagcgctta ggaggagcca tatggtcaat gagtaccgat 2640 tgaccaagat ttttacactt atccctggtg tatcggtact caatatatag tgagtaccaa 2700 atggcatttt ggtaattatg taaaagtaca ttgcaattca aaattcaaaa ttcaaaaatt 2760 aaatcattaa agcggtcatc cgtataatat t 2791 //