ID   AJ851887; SV 1; linear; genomic RNA; STD; VRL; 2110 BP.
XX
AC   AJ851887;
XX
DT   27-OCT-2004 (Rel. 81, Created)
DT   26-NOV-2008 (Rel. 97, Last updated, Version 2)
XX
DE   Rice tungro spherical virus gene for polyprotein, genomic RNA
XX
KW   CP1 protein; CP2 protein; CP3 protein; polyprotein.
XX
OS   Rice tungro spherical virus
OC   Viruses; Riboviria; Picornavirales; Secoviridae; Waikavirus.
XX
RN   [1]
RP   1-2110
RA   Tandon V.;
RT   ;
RL   Submitted (26-OCT-2004) to the INSDC.
RL   Tandon V., Department of Plant Molecular Biology, South Campus, University
RL   ofDelhi, South Campus, University of Delhi, Benito Juarez Road, New Delhi,
RL   110021, INDIA.
XX
RN   [2]
RA   Tandon V., Dasgupta I.;
RT   "Cloning and sequence analysis of the three coat protein genes of Rice
RT   Tungro Spherical virus from India";
RL   Unpublished.
XX
RN   [3]
RA   Tandon V.;
RT   "Nucleotide Sequence of Rice Tungro Spherical Virus (RTSV) Coat Protein
RT   Genes (CP1,2,3) of RTSV strain from India";
RL   Unpublished.
XX
DR   MD5; 83e8f92faf5b736284a2faefc4190d9f.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2110
FT                   /organism="Rice tungro spherical virus"
FT                   /host="Oryza Sativa"
FT                   /mol_type="genomic RNA"
FT                   /country="India:Orissa"
FT                   /db_xref="taxon:35287"
FT   CDS             <1..>2110
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q5W1L9"
FT                   /db_xref="InterPro:IPR001676"
FT                   /db_xref="InterPro:IPR024379"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="InterPro:IPR033703"
FT                   /db_xref="UniProtKB/TrEMBL:Q5W1L9"
FT                   /protein_id="CAH65557.1"
FT                   /translation="AGETVIVGGDEEQEAHQDSSIAAAGPTDEHNAMLQKIYLGSFKWK
FT                   VSDGGGSILKTFSLPSDIWAANDRMKNFLSYFQYYTCEGMTFTLTITSIGLHGGTLLVA
FT                   WDALSSATRRGIVSMIQLSNLPSMTLHASGSSIGTLTVTSPAIQHQICTSGSEGSIANL
FT                   GSLVISVANVLCADSASAQELNVNAWVQFDKPKLSYWTAQHTIAQSGGFEETQDLGDLQ
FT                   AIIATGKWSTTSDKNLMEIIVHPTACYVSEKLIYQTNLSVVAHMFAKWSGSMKYTFVFG
FT                   ASLFDRGKIMVSAVPVQFRNSKLTLSQMAAFPSMVCDLSVDTREFTFEVPYISIGKMSL
FT                   VCKDYLFDISSYNADLVVSRLHVMILDPLVKTGNASNSIGFYVVAGPGKDFKLHQMCGV
FT                   KSQFAHDVLTAQDFGRSLTCSRLLGNGFKEWCSRESLLMRVPLKNGKKRAFKYAVTPRM
FT                   RTLPPEATSLSWLSQIFVEWRGSLTYTIHVQSGSAIQHSYMRIWYDPNGKTDEKEVKFL
FT                   DSAHPPAGIKVYHWDLKIGDCFRFTVPYCARTEKLQIPKAYASTPYEWLTMYNGAVTFD
FT                   LRSGADMELFVSIAGGDDFEMFEQTVPPKCGSVSDSYTVLSYADDVKSVTEVPNKTTYL
FT                   ADEQPTTSAPRTSTVDTDEDPPTEGEIARTSNGTLVQYRGGAWKPMVERAPTMSKKQVG
FT                   PELEVSDPH"
FT   mat_peptide     1..624
FT                   /product="CP1 protein"
FT   mat_peptide     625..1233
FT                   /product="CP2 protein"
FT   mat_peptide     1234..2109
FT                   /product="CP3 protein"
XX
SQ   Sequence 2110 BP; 547 A; 470 C; 556 G; 537 T; 0 other;
     gctggtgaga cagttattgt gggcggtgac gaggagcaag aggcccatca ggatagtagc        60
     attgcagcag ctggacccac tgatgaacat aacgctatgc tgcaaaagat ttatcttggc       120
     tcctttaagt ggaaggtatc agatggaggg ggttcaattc tcaaaacctt ctccctccca       180
     tcagacatat gggctgccaa tgacaggatg aaaaatttcc tcagctactt tcagtattac       240
     acttgtgagg gaatgacatt tacgctcacg atcactagta ttggtctgca tggaggaacg       300
     ctgcttgtag cctgggatgc cttgagtagt gcgacaagaa ggggaatcgt ttcgatgata       360
     cagctgagca acctcccctc aatgacattg catgcaagtg ggagctctat tggcactttg       420
     actgtgactt ctccggcaat tcaacatcag atctgcacgt caggaagtga aggctctata       480
     gcgaatttgg gctctctcgt gatctccgtt gcgaacgtat tgtgcgccga ctcagcttca       540
     gcccaggaac ttaatgtcaa cgcttgggtg cagttcgaca agcccaagct cagttattgg       600
     acggcacaac acacgattgc acagagcgga ggttttgagg aaacgcagga tttgggcgat       660
     ctacaggcca taattgccac tgggaaatgg tccactacga gtgataagaa tttgatggag       720
     attattgttc accccactgc gtgctacgtg tcggaaaaac tgatatacca gaccaatttg       780
     agcgttgtgg ctcacatgtt tgccaaatgg tctggatcaa tgaagtacac gtttgttttt       840
     ggagcttcgc tgtttgacag gggaaagata atggtgagcg ctgttccagt acagttcaga       900
     aattcaaagc tcacactatc acaaatggca gcgtttccct cgatggtgtg cgatctgagc       960
     gtggatacac gggagtttac atttgaggtg ccatacattt ctatcggcaa aatgagtttg      1020
     gtttgtaaag attatctttt tgacatttct tcctacaatg ccgatttggt tgtgagccgt      1080
     ctgcatgtga tgatcctgga tcccttggtg aagactggaa atgcgtccaa ttcgataggc      1140
     ttttatgtag ttgctgggcc tggcaaagat ttcaaattgc accaaatgtg cggggtcaag      1200
     agccaatttg ctcatgatgt gctgaccgca caagattttg ggagaagcct aacatgttcg      1260
     cgtcttcttg gcaatggatt taaagaatgg tgctcccgag agtcattgtt gatgagggtc      1320
     cctcttaaaa atggaaagaa acgagccttc aagtatgccg tgactccccg gatgcgaact      1380
     ctgcctcctg aagccacaag tcttagctgg ttgagccaaa tttttgttga gtggcgcgga      1440
     tctttgactt acactattca cgtccaatct gggtccgcta ttcaacactc gtatatgcgc      1500
     atctggtatg accccaatgg caaaactgat gaaaaggagg tcaaatttct tgacagcgcg      1560
     catccaccag cagggatcaa agtgtaccac tgggacctca aaataggaga ctgctttcgc      1620
     ttcactgtcc catactgtgc aagaacagag aaattgcaga tcccaaaggc ttatgcgtca      1680
     acaccgtacg agtggctcac gatgtacaat ggagcggtga cttttgattt gcgcagtggt      1740
     gccgacatgg agctcttcgt ctcgatcgct ggaggagatg attttgagat gtttgaacag      1800
     accgtgcctc caaaatgtgg ttcagtgagc gactcataca ctgtcctatc atatgcagac      1860
     gatgttaaga gcgtgacgga agtgccgaac aagaccacgt acttggcaga tgagcaacca      1920
     accacctcgg cacctcgtac gtctactgtg gataccgacg aggacccacc gactgaggga      1980
     gagatcgcga ggacttcgaa tggaactctt gtgcagtacc gtggaggagc gtggaagcca      2040
     atggtggaac gtgcgccaac gatgtcgaag aagcaagtgg gtccagagct tgaggtgtca      2100
     gaccctcaca                                                             2110
//