ID   AJ810257; SV 1; linear; genomic RNA; STD; VRL; 772 BP.
XX
AC   AJ810257;
XX
DT   27-JUN-2005 (Rel. 84, Created)
DT   27-JUN-2005 (Rel. 84, Last updated, Version 1)
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DE   Cucumber mosaic Virus cp gene for coat protein, genomic RNA, isolate RT88
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KW   coat protein; cp gene.
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OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
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RN   [1]
RP   1-772
RA   Willingmann P.;
RT   ;
RL   Submitted (09-AUG-2004) to the INSDC.
RL   Willingmann P., Phytomedizin, Biozentrum Klein Flottbeck und Botanisch,
RL   Ohnhorststr. 18, 22609 Hamburg, GERMANY.
XX
RN   [2]
RX   DOI; 10.1016/j.jviromet.2004.09.021.
RX   PUBMED; 15582705.
RA   Deyong Z., Willingmann P., Heinze C., Adam G., Pfunder M., Frey B.,
RA   Frey J.;
RT   "Differentiation of Cucumber mosaic virus isolates by hybridization to
RT   oligonucleotides in a microarray format";
RL   J. Virol. Methods 123(1):101-108(2005).
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DR   MD5; 19fa5282b2d730095dfa162182aafb1f.
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FH   Key             Location/Qualifiers
FH
FT   source          1..772
FT                   /organism="Cucumber mosaic virus"
FT                   /segment="RNA3"
FT                   /isolate="RT88"
FT                   /serotype="Ia"
FT                   /mol_type="genomic RNA"
FT                   /country="Spain"
FT                   /isolation_source="melon"
FT                   /db_xref="taxon:12305"
FT   mat_peptide     1..657
FT                   /gene="cp"
FT                   /product="coat protein"
FT   CDS             1..657
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /function="structural protein"
FT                   /db_xref="GOA:Q4LCJ0"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="InterPro:IPR023800"
FT                   /db_xref="InterPro:IPR037137"
FT                   /db_xref="UniProtKB/TrEMBL:Q4LCJ0"
FT                   /protein_id="CAH17692.1"
FT                   /translation="MDKSGSTSAGRNRRRRPRRGSRSAPSSADANFRVLSQQLSRLNKT
FT                   LAAGRPTINHPTFVGSERCRPGYTFTSITLKPPKIDRGSYYGKRLLLPDSVTEYDKKLV
FT                   SRIQIRVNPLPKFDSTVWVTVRKVPASSDLSVAAISAMFADGASPVLVYQYAASGVQAN
FT                   NKLLYDLSAMRADIGDMRKYAVLVYSKDDALETDELVLHVDIEHQRIPTSGVLPV"
XX
SQ   Sequence 772 BP; 175 A; 204 C; 185 G; 208 T; 0 other;
     atggacaaat ctggatcaac cagtgctggt cgtaatcgtc gacgtcgtcc gcgtcgtggt        60
     tcccgctccg ccccctcctc cgcggatgct aactttagag tcttgtcgca gcagctttcg       120
     cgacttaata agacgttagc agctggtcgt ccaactatta accacccaac ctttgtaggg       180
     agtgaacgct gtagacctgg gtacacgttc acatctatta ccctaaagcc accaaaaata       240
     gaccgtgggt cttattacgg taaaaggttg ttattacctg attcagtcac ggaatatgat       300
     aagaagcttg tttcgcgcat tcaaattcga gttaatcctt tgccgaaatt tgattctacc       360
     gtgtgggtga cagtccgtaa agttcctgcc tcctcggact tatccgttgc cgccatctct       420
     gctatgttcg cggacggagc ctcaccggta ctggtttatc agtatgccgc atctggagtt       480
     caagccaaca acaaactgtt gtatgatctt tcggcgatgc gcgctgatat aggtgacatg       540
     agaaagtacg ccgtcctcgt gtactcaaaa gacgatgcgc tcgagacgga cgagctagta       600
     cttcatgttg acatcgagca ccaacgcatt cccacgtctg gggtgctccc agtctgattt       660
     cgtgtcccca gaatcctccc tccgatctct gtggcgggag ctgagttggc agttctgcta       720
     taaactgtct gaagtcacta aacgttttac ggtgaacggg ttgtccatcc ag               772
//