ID AJ810157; SV 1; circular; genomic DNA; STD; VRL; 2748 BP. XX AC AJ810157; XX DT 11-AUG-2004 (Rel. 80, Created) DT 20-OCT-2005 (Rel. 85, Last updated, Version 2) XX DE Stachytarpheta leaf curl virus - [Hn34] complete genome, isolate Hn34 XX KW ac1 gene; ac2 gene; AC2 protein; ac3 gene; AC3 protein; ac4 gene; KW AC4 protein; av1 gene; av2 gene; AV2 protein; coat protein; KW complete genome; Rep protein. XX OS Stachytarpheta leaf curl virus - [Hn34] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2748 RA Zhou X.; RT ; RL Submitted (09-AUG-2004) to the INSDC. RL Zhou X., Zhejiang University, Institute of Biotechnology, Kaixuan Road 268, RL Hangzhou, Zhejiang, 310029, CHINA. XX RN [3] RX DOI; 10.1007/s00705-005-0568-z. RX PUBMED; 15986176. RA Xiong Q., Fan S., Guo X., Zhou X.; RT "Stachytarpheta leaf curl virus is a novel monopartite begomovirus RT species"; RL Arch. Virol. 150(11):2257-2270(2005). XX DR MD5; b4be4f627cd4b5377bfd82176cef2f73. XX FH Key Location/Qualifiers FH FT source 1..2748 FT /organism="Stachytarpheta leaf curl virus - [Hn34]" FT /host="Stachytarpheta" FT /isolate="Hn34" FT /mol_type="genomic DNA" FT /db_xref="taxon:289999" FT CDS 130..480 FT /gene="av2" FT /product="AV2 protein" FT /db_xref="GOA:Q6A0H6" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q6A0H6" FT /protein_id="CAH17664.1" FT /translation="MWDPLLNEFPETVHGLRCMLAIKYLQLVEDTYSPDTLGYDLIRDL FT ILVIRARDYVEASRRYSHFHSRIQGASPAELRQPVCQPCCCPHCPRHKQKEVMGESAHV FT PQAQTHENVQKP" FT CDS 290..1063 FT /gene="av1" FT /product="coat protein" FT /db_xref="GOA:Q6A0H5" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q6A0H5" FT /protein_id="CAH17665.1" FT /translation="MSKRPADIVISTPASKVRRRLNFDSPYVSRAAAPTVLVTNKRRSW FT VNRPMYRKPRLMRMYRSPDVPKGCEGPCKVQSYEQRHDISHVGKVLCVSDVTRGSGLTH FT RVGKRFCVKSVYVLGKIWMDENIKTKNHTNTVMFYLVRDRRPFGTAMDFGQVFNMYDNE FT PSTATIKNDLRDRYQVLRKFTSTVTGGQYASKEQAIVRKFMKVNNHVVYNHQEAAKYEN FT HTENALLLYMACTHASNPVYTTLKIRIYFYDSVQN" FT CDS complement(1060..1464) FT /gene="ac3" FT /product="AC3 protein" FT /db_xref="GOA:Q6A0H4" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q6A0H4" FT /protein_id="CAH17666.1" FT /translation="MDFRTGEPITAAQAENGAYIWTVRNPLYFKITQHDQRPFSTNHDV FT ITLQVQFNYNLRKALGIHQCFLICRIWTRLRPQTWRFLKVFKYQCIKYLDNLGVISINN FT VIRAFSHVLYNVLEGTIDDELSSIIKFSLY" FT CDS complement(1205..1609) FT /gene="ac2" FT /product="AC2 protein" FT /db_xref="GOA:Q6A0H3" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q6A0H3" FT /protein_id="CAH17667.1" FT /translation="MRSSSPSNGHSTQVPIKVQHKIAKRTTRRRRVDLPCGCSYFIAIG FT CHNHGFSHRGTHHCSSSREWRVYLDGQKSPIFQNHPARPEAVLDEPRRNNTPSPIQLQP FT EESVGDTPMFSNLQNLDSFTSSDLAFLKSI" FT CDS complement(1512..2597) FT /gene="ac1" FT /product="Rep protein" FT /db_xref="GOA:Q6A0H2" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q6A0H2" FT /protein_id="CAH17668.1" FT /translation="MPPPRRFKIQAKNYFLTYPQCSLTKEEALSQLQNLETPTNKKYIK FT ICRELHEDGSPHLHVLIQFEGKYVCTNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYI FT DKDGDTLEWGEFQIDGRSARGGQQSANDAYAAALNTGSKSEALNVIKELAPKDYVLQFH FT NLNANLDRIFAPPLEVFVCPFSSSSFDQVPEELYEWSANNVVSAAARPLRPISIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNSALKNWAIHNAIFVTIQRPL FT YSGSHQGATQNSQANNEETTS" FT CDS complement(2150..2440) FT /gene="ac4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q6A0H1" FT /protein_id="CAH17669.1" FT /translation="MGALISTCLSSSRENTSARITDSSTWSPQPGQHISIRTFRELNPA FT PTSSPISIRTETPSNGESFRSTDDLQEGDNNQPMTLTPQHLTQAVSQRLLM" XX SQ Sequence 2748 BP; 751 A; 546 C; 619 G; 832 T; 0 other; accggatggc cgagattttt ttaaagtggt cccaccacgt gcatttgttg gccactcaaa 60 acgctccctt aaagcttatt taaataatgg ccgttataaa tacttggtcc ccaagtatta 120 aagccaaaca tgtgggatcc gctgctaaat gagtttcccg aaaccgtaca cggtcttagg 180 tgtatgctag ccattaagta tctacaacta gtcgaagata catattctcc tgatacatta 240 ggatacgatt taattcgcga tttaatatta gttatccgtg ctagggatta tgtcgaagcg 300 tcccgccgat atagtcattt ccactcccgc atccaaggtg cgtcgccggc tgaacttcga 360 cagcccgtat gtcagccgtg ctgctgcccc cactgtcctc gtcacaaaca aaaggaggtc 420 atgggtgaat cggcccatgt accgcaagcc cagactcatg agaatgtaca gaagccctga 480 tgtgccgaaa ggctgtgaag gcccatgtaa ggtccaatcg tatgaacaga ggcacgacat 540 atcccatgtt ggtaaagtat tatgtgttag tgatgtcact cgtggtagtg ggcttaccca 600 tcgtgttggt aagaggttct gtgtgaaatc cgtttatgta ttgggtaaaa tatggatgga 660 tgaaaatatc aagacgaaga accatacgaa cactgtgatg ttttatcttg ttcgtgatag 720 aaggcccttt ggtactgcta tggattttgg tcaggtgttt aacatgtatg ataatgagcc 780 tagtactgct actatcaaga acgatcttcg agatcgttat caagttttaa ggaaattcac 840 ttcaacagtc actggtggtc aatatgcatc taaggagcaa gcaatagtta ggaagtttat 900 gaaggtcaac aatcatgtag tgtataatca tcaagaggct gcgaaatatg agaatcacac 960 agagaatgct ctgttattgt atatggcatg tactcatgcc agtaatccag tgtatactac 1020 tttgaagatc agaatctatt tctatgattc tgttcagaat taataaagac tgaattttat 1080 tatacttgat aattcgtcgt caattgtccc ctctaataca ttgtataata catgagaaaa 1140 cgccctaatt acattgttta tactaatcac tcccaaattg tctaaatatt taatacattg 1200 atacttaaat acttttaaga aacgccaggt ctgaggacgt aaacgagtcc agattctgca 1260 gattagaaaa cattggtgta tccccaacgc tttcctcagg ttgtagttga attggacttg 1320 gagtgttatt acgtcgtggt tcgtcgagaa cggcctctgg tcgtgctggg tgattttgaa 1380 atatagggga tttctgaccg tccagatata cgcgccattc tctgcttgag ctgcagtgat 1440 gggttccccg gtgcgaaaat ccatgattgt ggcaacctat agctatgaaa taagagcatc 1500 cacaagggag gtcaactcgt cgtctcctcg ttgttcgctt ggctattttg tgttgcacct 1560 tgatgggaac ctgagtagag tggccgttgg atggtgacga agatcgcatt atgtatagcc 1620 caatttttta atgcggaatt cttttcttcg tctaagaact ctttatagct ggaattgggt 1680 cctggattgc ataggaagat tgttgggata ccacctttaa tttgaactgg cttcccatac 1740 tttgtattgg attgccagtc cctttgggcc cccatgaatt ccttaaagtg ctttagatag 1800 tgggggtcaa cgtcatcaat gacgttatac caagcatcat tgctgtatac ctttgggctg 1860 agatcaagat gtccacacag ataattgtgt ggtcctaacg acctagccca cattgtttta 1920 cccgtacgac tatcaccttc tatcacaata ctaatcggtc tcaaaggccg cgcagcggca 1980 ctgacaacat tatttgcaga ccactcataa agttcttctg gaacttgatc gaaagaagaa 2040 gaagaaaaag gacaaacaaa tacctctaaa ggaggtgcaa aaatcctatc tagattagca 2100 tttaaattat gaaattgtaa aacataatct tttggagcta actccttaat tacattaaga 2160 gcctctgact tactgcctgt gttaagtgct gcggcgtaag cgtcattggc tgattgttgt 2220 ccccctcttg cagatcgtcc gtcgatctga aactctcccc attcgagggt gtctccgtcc 2280 ttatcgatat aggacttgac gtcggagctg gatttagctc cctgaatgtt cggatggaaa 2340 tgtgctgacc tggttgggga gaccaagtcg aagaatctgt tattcgtgca gacgtatttt 2400 ccctcgaact ggataagcac gtggagatga gggctcccat cttcgtgaag ctctctgcag 2460 attttgatgt atttcttgtt ggttggggtt tctaggtttt gaagttggga gagtgcttcc 2520 tctttagtta gagagcactg tggataagtg aggaaataat ttttagcttg tattttaaaa 2580 cgacgcgggg gaggcatttt gagcgtcgtt ttgtattgga gacaatcaac tctatgaaat 2640 gaattggaga ctggagtaca atatatagtg tgtctccaaa tggcattctc gtaattcctc 2700 atagaaattc aaaatttgaa ttggtaaagc ggccatccgt ataatatt 2748 //