ID   AJ781778; SV 1; linear; genomic RNA; STD; VRL; 1807 BP.
XX
AC   AJ781778;
XX
DT   29-MAR-2005 (Rel. 83, Created)
DT   29-MAR-2005 (Rel. 83, Last updated, Version 1)
XX
DE   Sweet potato feathery mottle virus partial mRNA for polyprotein, isolate
DE   Aus4c
XX
KW   coat protein; CP; NIb protein; nuclear inclusion body protein; polyprotein.
XX
OS   Sweet potato feathery mottle virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1807
RA   Tairo F.;
RT   ;
RL   Submitted (07-JUL-2004) to the INSDC.
RL   Tairo F., Plant Biology and Forest Genetics,, Swedish Univ of Agric
RL   Sciences (SLU), Genetic Centre, Box 7080, SE 750 07, Uppsala, SWEDEN.
XX
RN   [4]
RX   DOI; 10.1111/j.1364-3703.2005.00267.x.
RX   PUBMED; 20565651.
RA   Tairo F., Mukasa S.B., Jones R.A.C., Kullaya A., Rubaihayo P.R.,
RA   Valkonen J.P.T.;
RT   "Unravelling the genetic diversity of the three main viruses involved in
RT   Sweet Potato Virus Disease (SPVD), and its practical implications";
RL   Mol. Plant Pathol. 6(2):199-211(2005).
XX
DR   MD5; 54d0a21bca15cd1ed1ccfc150c6588c1.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1807
FT                   /organism="Sweet potato feathery mottle virus"
FT                   /isolate="Aus4c"
FT                   /mol_type="genomic RNA"
FT                   /country="Australia:Western"
FT                   /isolation_source="Ipomea batatas"
FT                   /db_xref="taxon:12844"
FT   CDS             <1..1584
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q59A00"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q59A00"
FT                   /protein_id="CAH03770.1"
FT                   /translation="GNNSGQPSTVVDNTLMVVLAVYYTLLKLGVLELEISERCVFFANG
FT                   DDLLIAMRPDTAHLLDNFGECFAELGLNYDFSSRTTKKEELWFMSHCGVKRDGIYIPKL
FT                   EPERIVSILEWDRSHEPIHRLEAICAAMVEAWGYDELLHQIRRFYAWVLGQAPYSELAR
FT                   TGKAIYAETALRSLYTGVQPSADDLSEYTRVLNEMYDDSLLQDNDLTVYHQSGNPPEFK
FT                   DAGANPPAPKPKGAFTAPEITEVTEPEDPRQAALREARQKQPAVTPESYSRDTGEKPMR
FT                   SISPQRVKDKDVNVGTTGTFLVPRVKLHTSKMRQPRVNGISVVNLQHLATYEPEQHNIG
FT                   NTRSTQEQFQAWYEGVKGDYGVNDAGMSILLNGLMVWCIENGTSPNINGVWTMMDGDEQ
FT                   VTYPIKPLLDHAVPTFRQIMTHFSDVAEAYIEMRNRTKAYMPRYGLQRNLTDMSLARYA
FT                   FDFYELHSTTPTRAKEAHMQMKAAALKNAHNRLFGLDGNVSTQEEDTERHTATDVTRNI
FT                   HNLLGMRGVH"
FT   mat_peptide     <1..645
FT                   /product="nuclear inclusion body protein"
FT                   /note="NIb"
FT   mat_peptide     646..1581
FT                   /product="coat protein"
FT                   /note="CP"
FT   3'UTR           1594..1807
XX
SQ   Sequence 1807 BP; 545 A; 362 C; 430 G; 468 T; 2 other;
     ggcaacaata gtggrcarcc atcaaccgtc gtggacaata cattgatggt tgtgctagcc        60
     gtctactaca ctttgttgaa attgggtgtt ttggagctcg agatcagtga acggtgtgta       120
     ttcttcgcaa atggggatga tttactgata gctatgaggc cagatacagc tcatcttttg       180
     gataacttcg gtgagtgctt tgctgagctt gggcttaact atgacttctc atcaagaaca       240
     actaagaagg aagaattatg gttcatgtct cactgtggag tcaaacgaga tggaatatac       300
     attccaaaac tcgaacctga acgaatagta tctattcttg aatgggatag atcacatgag       360
     cctatacaca ggctcgaagc aatttgtgct gcaatggtgg aagcgtgggg ttatgacgaa       420
     cttctccacc aaattagaag attctatgca tgggtcttgg gacaagcacc atacagtgaa       480
     ctagcacgaa ctggaaaggc catatatgct gaaactgcac ttagatcact gtacactgga       540
     gtgcaaccta gcgctgacga tctcagcgag tacacacgtg ttcttaacga gatgtatgat       600
     gatagccttc ttcaagacaa tgatttaacg gtgtatcatc aatctggtaa cccccctgaa       660
     tttaaagatg caggtgcgaa cccaccagca ccaaagccaa aaggggcatt tacagcacca       720
     gaaatcacag aagttactga gccggaggat cccagacaag ctgcgcttcg cgaagctaga       780
     cagaaacaac ctgctgtcac acccgagtca tacagtagag acacaggtga gaaacctatg       840
     cgttctattt caccacaaag ggtgaaagac aaagatgtca acgttggcac gacaggcaca       900
     tttttggttc cacgagttaa gctccatact agcaagatgc gccaacctag agtcaatgga       960
     atctctgtag taaacttaca acacctcgca acttatgaac ctgagcagca taacattggg      1020
     aatacacgct caactcagga acagtttcaa gcatggtatg aaggtgttaa gggtgattat      1080
     ggtgttaatg acgctggaat gtcaatcttg ttgaatggat tgatggtatg gtgcatagag      1140
     aatggaacat ccccaaatat aaatggcgtt tggacgatga tggatgggga tgaacaagta      1200
     acgtacccca taaagccatt actggatcat gcagtgccta cttttaggca aatcatgaca      1260
     cacttcagtg acgttgctga agcgtatata gaaatgagga atcgcaccaa ggcatatatg      1320
     cctaggtatg gattacaacg taacttgact gatatgagtc ttgcgcgata tgcatttgat      1380
     ttctatgagc tgcactcaac aacacctaca cgtgctaaag aagcacacat gcagatgaaa      1440
     gcagctgcac ttaagaatgc gcataatcgg ttgtttggtt tagatggaaa cgtctcaacg      1500
     caagaagagg atacggagag gcacactgcg actgatgtta ctagaaatat acataacctc      1560
     ttaggaatga ggggtgtgca ctaggtggaa ctttgcactg tattcattta cttatgtggt      1620
     ttttagtatg cctttatttt aaattcgtgt ccttcagtcc cgacagagat ggttgggtgt      1680
     attgacagag tgggctttta gcctggtcca tacactcgag aaatttctgg tctattacgt      1740
     atcataaggg actcttaaaa gtgaggagta cctcgtaaga aaagcctttt tggttcgtga      1800
     tcgagcc                                                                1807
//